FFCP PHASE1:Mm9::chr10:80336986..80336992,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=451|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:80336986..80336992,+|id=chr10:80336986..80336992,+|ontology_enrichment_celltype=CL:0000075!5.20e-14!7;CL:0000239!4.82e-12!6;CL:0000677!4.82e-12!6;CL:0000212!4.82e-12!6;CL:0000584!4.82e-12!6;CL:0000215!3.75e-09!3;CL:0000630!2.15e-08!3;CL:0002563!6.95e-08!9;CL:0002251!6.95e-08!9;CL:0000066!1.48e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,2.66e-26,6;CL:0000677,2.66e-26,6;CL:0000584,2.66e-26,6;CL:0000075,1.27e-22,7;CL:0002563,1.04e-17,9;CL:0002251,1.04e-17,9;CL:0000215,6.65e-14,3;CL:0000223,1.97e-12,20;CL:0000213,2.31e-11,1;CL:0002078,2.31e-11,1;CL:0000115,2.31e-11,1;CL:0002262,2.31e-11,1;CL:1000398,2.31e-11,1;CL:0000057,2.90e-11,1;CL:0000632,2.90e-11,1;CL:0002076,8.56e-11,15;CL:0000066,5.64e-10,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.58e-14!15;UBERON:0001242!6.47e-10!13;UBERON:0000060!6.47e-10!13;UBERON:0001262!6.47e-10!13;UBERON:0004786!6.47e-10!13;UBERON:0000485!1.21e-08!11;UBERON:0004923!3.95e-08!24;UBERON:0003350!6.95e-08!9;UBERON:0004808!6.95e-08!9;UBERON:0001277!6.95e-08!9;UBERON:0001962!7.62e-07!2;UBERON:0001961!7.62e-07!2;UBERON:0001744!7.62e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.69e-23,15;UBERON:0001962,2.50e-20,2;UBERON:0001961,2.50e-20,2;UBERON:0001744,2.50e-20,2;UBERON:0003350,1.04e-17,9;UBERON:0004808,1.04e-17,9;UBERON:0001277,1.04e-17,9;UBERON:0004923,1.36e-14,24;UBERON:0000485,1.43e-14,11;UBERON:0002465,6.65e-14,3;UBERON:0001242,2.15e-12,13;UBERON:0001262,2.15e-12,13;UBERON:0004786,2.15e-12,13;UBERON:0002394,2.31e-11,1;UBERON:0001281,2.31e-11,1;UBERON:0000353,2.31e-11,1;UBERON:0003497,2.31e-11,1;UBERON:0003909,2.31e-11,1;UBERON:0003928,2.31e-11,1;UBERON:0003835,2.31e-11,1;UBERON:0003513,2.31e-11,1;UBERON:0001280,2.31e-11,1;UBERON:0004647,2.31e-11,1;UBERON:0002294,2.31e-11,1;UBERON:0001173,2.31e-11,1;UBERON:0004912,2.31e-11,1;UBERON:0005171,2.31e-11,1;UBERON:0003199,5.74e-11,1|phase1_expression=0,1.74487703819681,0,1.51232105653415,9.5170188689806,0.503637815735669,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,2.07990149631429,2.06468352960453,0,0.86152399231815,0.430942465371778,0.570070258369122,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36307147999731,0.377857800533928,8.40607017234866,2.58127163094416,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0.790575555893047,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr10:80336986..80336992,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=451 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:80336986..80336992,+ | |||
|description=CAGE_peak_at_chr10:80336986..80336992,+ | |||
|id=chr10:80336986..80336992,+ | |||
|ontology_enrichment_celltype=CL:0000075!5.20e-14!7;CL:0000239!4.82e-12!6;CL:0000677!4.82e-12!6;CL:0000212!4.82e-12!6;CL:0000584!4.82e-12!6;CL:0000215!3.75e-09!3;CL:0000630!2.15e-08!3;CL:0002563!6.95e-08!9;CL:0002251!6.95e-08!9;CL:0000066!1.48e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.66e-26,6;CL:0000677,2.66e-26,6;CL:0000584,2.66e-26,6;CL:0000075,1.27e-22,7;CL:0002563,1.04e-17,9;CL:0002251,1.04e-17,9;CL:0000215,6.65e-14,3;CL:0000223,1.97e-12,20;CL:0000213,2.31e-11,1;CL:0002078,2.31e-11,1;CL:0000115,2.31e-11,1;CL:0002262,2.31e-11,1;CL:1000398,2.31e-11,1;CL:0000057,2.90e-11,1;CL:0000632,2.90e-11,1;CL:0002076,8.56e-11,15;CL:0000066,5.64e-10,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.58e-14!15;UBERON:0001242!6.47e-10!13;UBERON:0000060!6.47e-10!13;UBERON:0001262!6.47e-10!13;UBERON:0004786!6.47e-10!13;UBERON:0000485!1.21e-08!11;UBERON:0004923!3.95e-08!24;UBERON:0003350!6.95e-08!9;UBERON:0004808!6.95e-08!9;UBERON:0001277!6.95e-08!9;UBERON:0001962!7.62e-07!2;UBERON:0001961!7.62e-07!2;UBERON:0001744!7.62e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.69e-23,15;UBERON:0001962,2.50e-20,2;UBERON:0001961,2.50e-20,2;UBERON:0001744,2.50e-20,2;UBERON:0003350,1.04e-17,9;UBERON:0004808,1.04e-17,9;UBERON:0001277,1.04e-17,9;UBERON:0004923,1.36e-14,24;UBERON:0000485,1.43e-14,11;UBERON:0002465,6.65e-14,3;UBERON:0001242,2.15e-12,13;UBERON:0001262,2.15e-12,13;UBERON:0004786,2.15e-12,13;UBERON:0002394,2.31e-11,1;UBERON:0001281,2.31e-11,1;UBERON:0000353,2.31e-11,1;UBERON:0003497,2.31e-11,1;UBERON:0003909,2.31e-11,1;UBERON:0003928,2.31e-11,1;UBERON:0003835,2.31e-11,1;UBERON:0003513,2.31e-11,1;UBERON:0001280,2.31e-11,1;UBERON:0004647,2.31e-11,1;UBERON:0002294,2.31e-11,1;UBERON:0001173,2.31e-11,1;UBERON:0004912,2.31e-11,1;UBERON:0005171,2.31e-11,1;UBERON:0003199,5.74e-11,1 | |||
|phase1_expression=0,1.74487703819681,0,1.51232105653415,9.5170188689806,0.503637815735669,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,2.07990149631429,2.06468352960453,0,0.86152399231815,0.430942465371778,0.570070258369122,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36307147999731,0.377857800533928,8.40607017234866,2.58127163094416,0,0,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0.790575555893047,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr10:80336986..80336992,+ | |||
}} |
Latest revision as of 20:30, 4 August 2015
Short description: | p@chr10:80336986..80336992, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:80336986..80336992, + |
Coexpression cluster: | MCL_coexpression_mm9:451 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.66e-26 | 6 |
gut absorptive cell | 2.66e-26 | 6 |
enterocyte | 2.66e-26 | 6 |
columnar/cuboidal epithelial cell | 1.27e-22 | 7 |
intestinal epithelial cell | 1.04e-17 | 9 |
epithelial cell of alimentary canal | 1.04e-17 | 9 |
barrier cell | 6.65e-14 | 3 |
endodermal cell | 1.97e-12 | 20 |
lining cell | 2.31e-11 | 1 |
meso-epithelial cell | 2.31e-11 | 1 |
endothelial cell | 2.31e-11 | 1 |
endothelial cell of sinusoid | 2.31e-11 | 1 |
endothelial cell of hepatic sinusoid | 2.31e-11 | 1 |
fibroblast | 2.90e-11 | 1 |
hepatic stellate cell | 2.90e-11 | 1 |
endo-epithelial cell | 8.56e-11 | 15 |
epithelial cell | 5.64e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.69e-23 | 15 |
gut-associated lymphoid tissue | 2.50e-20 | 2 |
mucosa-associated lymphoid tissue | 2.50e-20 | 2 |
lymphoid tissue | 2.50e-20 | 2 |
epithelium of mucosa | 1.04e-17 | 9 |
gastrointestinal system epithelium | 1.04e-17 | 9 |
intestinal epithelium | 1.04e-17 | 9 |
organ component layer | 1.36e-14 | 24 |
simple columnar epithelium | 1.43e-14 | 11 |
lymphoid system | 6.65e-14 | 3 |
intestinal mucosa | 2.15e-12 | 13 |
wall of intestine | 2.15e-12 | 13 |
gastrointestinal system mucosa | 2.15e-12 | 13 |
bile duct | 2.31e-11 | 1 |
hepatic sinusoid | 2.31e-11 | 1 |
parenchyma | 2.31e-11 | 1 |
abdomen blood vessel | 2.31e-11 | 1 |
sinusoid | 2.31e-11 | 1 |
digestive system duct | 2.31e-11 | 1 |
abdominal segment blood vessel | 2.31e-11 | 1 |
trunk blood vessel | 2.31e-11 | 1 |
liver parenchyma | 2.31e-11 | 1 |
liver lobule | 2.31e-11 | 1 |
biliary system | 2.31e-11 | 1 |
biliary tree | 2.31e-11 | 1 |
biliary bud | 2.31e-11 | 1 |
hepatic duct | 2.31e-11 | 1 |
egg chamber | 5.74e-11 | 1 |