FFCP PHASE1:Mm9::chr10:82323234..82323295,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=50493|HGNC=|MCL_coexpression_id=108|UniProt=Q9JMH6|association_with_transcript=148bp_to_ENSMUST00000167785,NM_001042514,uc007gkb.1_5end|description=CAGE_peak_2_at_Txnrd1_5end|id=chr10:82323234..82323295,+|ontology_enrichment_celltype=CL:0000540!8.46e-11!33;CL:0000047!8.46e-11!33;CL:0000031!8.46e-11!33;CL:0000404!8.46e-11!33;CL:0000393!2.77e-08!39;CL:0000211!2.77e-08!39;CL:0000117!5.36e-07!23;CL:0000337!5.36e-07!23|ontology_enrichment_celltype_v019_2=CL:0000540,8.34e-11,33;CL:0000047,8.34e-11,33;CL:0000031,8.34e-11,33;CL:0000404,8.34e-11,33;CL:0000393,2.74e-08,39;CL:0000211,2.74e-08,39;CL:0000117,5.31e-07,23;CL:0000337,5.31e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000153,8.95e-08,43|phase1_expression=13.6126520039075,12.2141392673776,10.9199817453489,10.8887116070459,7.51343594919521,6.5472916045637,4.43864017131499,6.06879620175408,1.83025338797167,1.63845168425395,5.65019295144166,11.8062795313098,7.19043065711064,10.3156074854417,1.66554880907831,1.61980213911861,3.49780939064073,6.30924330716475,6.58149281307546,5.09267582157636,1.9559956734746,5.75887516965135,3.13439746966722,7.67963629408352,6.19405058881359,8.6134794617253,5.1691439539089,6.03319451520489,9.5011709728187,8.31699428207772,4.8780712344167,5.08024538767705,3.07532393792285,0,5.77703239502549,4.3221007793208,4.90006455029686,3.34825304589526,0.7813353445238,6.28228492768558,5.29408339227913,3.41522742479223,4.85510353031154,3.27331726736501,3.24406179902447,5.50640256485045,0,3.05235218932625,1.31811709640683,1.36100929351998,2.79972843250725,1.43752564364972,5.5368259999053,8.70434570413613,8.06625117941913,2.05807548828758,1.71920063963254,2.06268836910977,21.647861311977,20.1016572123373,14.5781222806421,1.0165335962074,1.77858959222228,0.449949858640699,1.97773272513395,2.1314403448383,2.99600110518405,1.53687322128622,17.0050964185903,20.7909145030804,17.0363218694619,4.85606673486466,6.84692476950002,24.8656322406357,27.0284228271427,32.1726575313507,4.40463523997555,1.91531007127782,2.15049146558741,21.3655786122914,19.9443063053253,16.1483144872596,3.62937898701795,2.8138130501584,2.59757021220577,11.7851434189467,8.82704420954438,17.7079473534036,3.18050011999373,4.08086424576642,2.02905142091174,0,5.439770669662,1.07940638327563,0.649776417447669,0.896053774194671,2.24711072210803,4.26075806445144,3.11743205523443,2.47337702157238,7.74638808771743,5.13305909657271,2.54805239706646,7.11066703153331,2.38140145112336,1.52015919285059,1.51657333504435,2.74041311325744,5.43769555659061,2.3750742250372,6.7659277438793,2.13125834818499,3.22861696158482,4.52167921657868,3.76283862834255,4.39833069653864,0.988779870937496,3.03658649531814,4.42305275974937,3.23533699894818,2.20841518460394,2.42437626567611,1.86391761218122,1.46390398505774,1.46612694769419,4.85368404896324,6.4700167233197,4.19931911695385,4.57452817463033,1.19832511523858,3.20250421973039,15.8324483662209,1.04294592115366,0.511430914660661,2.90903262383384,1.1356888414743,3.86989582631202,3.11017426525233,3.0326731012041,0.631325567659422,13.5325260681212,12.644615743841,10.6236656585156,8.74087943447147,10.3415478710018,11.6583485459213,10.3071897015702,1.29351685369508,13.3652155618362,10.5899404893979,8.2697028357056,7.45265490253754,4.72680323683516,4.87553033131033,3.90986059175093,5.17489093728082,5.61770549850588,2.05878325691772,2.27330799516474,7.87077935634907,6.0976775595085,5.94204802821349,7.33908680314152,4.13204886669548,5.39934895105824,3.0229412817553,2.14618721119695,2.56883753207773,3.45575684818309,1.80584210487005,0.648550476366846,0.438599962275997,0.878200461164203,0.536825675041487,0.841159794256509,12.7601719350313,8.59088835757875,10.3135720998782,8.74481827194459,5.34144345279009,6.95884291139304,5.84882221407693,5.55945109612176,6.27744566171445,5.69434873853414,6.0938613247884,4.02136334080431,5.57078121715222,4.874102177978,8.08937467788799,4.75503709724327,5.17767310461355,9.10405924574792,10.0538691096561,10.1436962105772,4.88763186828754,3.68509725618489,3.64706263429657,3.98390183882821,1.32849133181642,1.09899109488962,1.1105744752962,1.48226313543574,4.50481785433454,4.32429789249047,4.27238013531222,2.84004169943904,2.41177159752417,5.0925170356284,2.30156909960649,0.972811360650212,1.92192989231657,1.43768206527355,3.34926852901653,3.74445207737473,1.01031551178845,0.896987067609561,1.92977408545347,2.40179147216586,12.885416000393,9.4519686336375,8.14776411720903,6.80601720036656,4.02015017860358,2.38043640886014,1.56106918286239,5.83250033192907,4.87222317227305,4.46473352240964,1.63863314715738,0.518054945597687,0.867894351489069,0,3.80733978673097,3.44234991113325,1.93155722413313,1.44495530989013,2.57865710502847,2.95082901678016,1.51482556322624,9.78075480190396,7.80877488593277,6.24727853425117,10.2756583119597,9.13474563737816,9.34152551603147,10.1202675418724,7.01414058987149,8.69633111482352,4.17717711348349,4.11626247103979,5.1639025063504,4.0721739838394,2.8044920905331,1.32745138339963,7.28341908464944,9.97667737983678,4.14931175462976,4.42952839321159,3.68922177532713,4.65170927702798,6.18007340111759,4.27796854061666,2.21225730555071,3.16255825724996,3.09406629744561,3.06395645178409,6.30213829109586,6.85601024048599,3.21505552547388,1.95074257006501,1.78368817602071,2.46823530903181,1.8267896946876,0.704015124191131,2.1183207086382,0.882113592219848,2.14352128823924,3.87514624070173,3.98065304525829,3.22305328808468,1.80554989719567,7.28702091574627,1.29797711407357,1.70870880797853,5.36605856704379,1.11116716421827,2.44878994106098,2.46049609897845,1.37266903923914,6.11922347977879,6.71766971153558,6.08079884739465,0.954670618015114,11.704431762502,7.31950081656655,5.61627772273367,3.76358932826044,2.62035076495413,2.83215127408124,1.90102948168273,1.30877970992015,0.777689839750757,1.24267862617385,0,6.72824457197905,7.1147150896552,4.4723773319131,7.4912697617084,3.54807863530634,5.63314745499619,3.51551839078665,1.99232754408851,0.966336483304024,0.576060012515731,6.95224465381992,8.31173382689673,6.16265742988964,7.27556608675652,7.87717460936918,10.3314304486258,8.53387691591779,8.27061352177632,10.0966449948148,8.23033511873998,8.26774718122092,7.89408833991995,10.1022433722346,7.83075244616512,0.680191150845634,1.77588762699252,1.16628013592318,2.18250001273302,2.12508553435409,1.87682475451182,3.29672923681077,2.35805216986972,3.00943262421218,1.12950368523413,0.920650473014354,1.14579102687879,1.71853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0,0.453142408984205,1.55328093525546,18.0589984796467,9.97562183502578,8.70741389346084,5.34834777550247,6.70762120409543,5.69914876195044,3.55594764482584,3.5025959730612,3.53011130550997,4.29585259998456,3.54871019846336,5.28153755881013,4.49479235855436,4.54578582074572,5.34149861287203,3.33405583898152,5.2147946675185,5.01563973205633,4.53294490883637,5.88795680537589,7.88599280486455,2.8396128985494,4.76872379894642,3.77900683244054,4.04670335785922,3.80765735512544,3.65855945745545,2.89376682581627,4.34573164306758,5.61142271657738,4.86403574309114,5.02372860115374,6.95692773388472,4.49316839439301,3.47231899766054,9.74261253957989,4.67863216890817,3.86767897286937,2.86932498103265,0.882365676478062,2.55054619182464|short_description=p2@Txnrd1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50493 | |||
|HGNC= | |||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JMH6 | |||
|association_with_transcript=148bp_to_ENSMUST00000167785,NM_001042514,uc007gkb.1_5end | |||
|cluster_id=chr10:82323234..82323295,+ | |||
|description=CAGE_peak_2_at_Txnrd1_5end | |||
|id=chr10:82323234..82323295,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.46e-11!33;CL:0000047!8.46e-11!33;CL:0000031!8.46e-11!33;CL:0000404!8.46e-11!33;CL:0000393!2.77e-08!39;CL:0000211!2.77e-08!39;CL:0000117!5.36e-07!23;CL:0000337!5.36e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.34e-11,33;CL:0000047,8.34e-11,33;CL:0000031,8.34e-11,33;CL:0000404,8.34e-11,33;CL:0000393,2.74e-08,39;CL:0000211,2.74e-08,39;CL:0000117,5.31e-07,23;CL:0000337,5.31e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,8.95e-08,43 | |||
|phase1_expression=13.6126520039075,12.2141392673776,10.9199817453489,10.8887116070459,7.51343594919521,6.5472916045637,4.43864017131499,6.06879620175408,1.83025338797167,1.63845168425395,5.65019295144166,11.8062795313098,7.19043065711064,10.3156074854417,1.66554880907831,1.61980213911861,3.49780939064073,6.30924330716475,6.58149281307546,5.09267582157636,1.9559956734746,5.75887516965135,3.13439746966722,7.67963629408352,6.19405058881359,8.6134794617253,5.1691439539089,6.03319451520489,9.5011709728187,8.31699428207772,4.8780712344167,5.08024538767705,3.07532393792285,0,5.77703239502549,4.3221007793208,4.90006455029686,3.34825304589526,0.7813353445238,6.28228492768558,5.29408339227913,3.41522742479223,4.85510353031154,3.27331726736501,3.24406179902447,5.50640256485045,0,3.05235218932625,1.31811709640683,1.36100929351998,2.79972843250725,1.43752564364972,5.5368259999053,8.70434570413613,8.06625117941913,2.05807548828758,1.71920063963254,2.06268836910977,21.647861311977,20.1016572123373,14.5781222806421,1.0165335962074,1.77858959222228,0.449949858640699,1.97773272513395,2.1314403448383,2.99600110518405,1.53687322128622,17.0050964185903,20.7909145030804,17.0363218694619,4.85606673486466,6.84692476950002,24.8656322406357,27.0284228271427,32.1726575313507,4.40463523997555,1.91531007127782,2.15049146558741,21.3655786122914,19.9443063053253,16.1483144872596,3.62937898701795,2.8138130501584,2.59757021220577,11.7851434189467,8.82704420954438,17.7079473534036,3.18050011999373,4.08086424576642,2.02905142091174,0,5.439770669662,1.07940638327563,0.649776417447669,0.896053774194671,2.24711072210803,4.26075806445144,3.11743205523443,2.47337702157238,7.74638808771743,5.13305909657271,2.54805239706646,7.11066703153331,2.38140145112336,1.52015919285059,1.51657333504435,2.74041311325744,5.43769555659061,2.3750742250372,6.7659277438793,2.13125834818499,3.22861696158482,4.52167921657868,3.76283862834255,4.39833069653864,0.988779870937496,3.03658649531814,4.42305275974937,3.23533699894818,2.20841518460394,2.42437626567611,1.86391761218122,1.46390398505774,1.46612694769419,4.85368404896324,6.4700167233197,4.19931911695385,4.57452817463033,1.19832511523858,3.20250421973039,15.8324483662209,1.04294592115366,0.511430914660661,2.90903262383384,1.1356888414743,3.86989582631202,3.11017426525233,3.0326731012041,0.631325567659422,13.5325260681212,12.644615743841,10.6236656585156,8.74087943447147,10.3415478710018,11.6583485459213,10.3071897015702,1.29351685369508,13.3652155618362,10.5899404893979,8.2697028357056,7.45265490253754,4.72680323683516,4.87553033131033,3.90986059175093,5.17489093728082,5.61770549850588,2.05878325691772,2.27330799516474,7.87077935634907,6.0976775595085,5.94204802821349,7.33908680314152,4.13204886669548,5.39934895105824,3.0229412817553,2.14618721119695,2.56883753207773,3.45575684818309,1.80584210487005,0.648550476366846,0.438599962275997,0.878200461164203,0.536825675041487,0.841159794256509,12.7601719350313,8.59088835757875,10.3135720998782,8.74481827194459,5.34144345279009,6.95884291139304,5.84882221407693,5.55945109612176,6.27744566171445,5.69434873853414,6.0938613247884,4.02136334080431,5.57078121715222,4.874102177978,8.08937467788799,4.75503709724327,5.17767310461355,9.10405924574792,10.0538691096561,10.1436962105772,4.88763186828754,3.68509725618489,3.64706263429657,3.98390183882821,1.32849133181642,1.09899109488962,1.1105744752962,1.48226313543574,4.50481785433454,4.32429789249047,4.27238013531222,2.84004169943904,2.41177159752417,5.0925170356284,2.30156909960649,0.972811360650212,1.92192989231657,1.43768206527355,3.34926852901653,3.74445207737473,1.01031551178845,0.896987067609561,1.92977408545347,2.40179147216586,12.885416000393,9.4519686336375,8.14776411720903,6.80601720036656,4.02015017860358,2.38043640886014,1.56106918286239,5.83250033192907,4.87222317227305,4.46473352240964,1.63863314715738,0.518054945597687,0.867894351489069,0,3.80733978673097,3.44234991113325,1.93155722413313,1.44495530989013,2.57865710502847,2.95082901678016,1.51482556322624,9.78075480190396,7.80877488593277,6.24727853425117,10.2756583119597,9.13474563737816,9.34152551603147,10.1202675418724,7.01414058987149,8.69633111482352,4.17717711348349,4.11626247103979,5.1639025063504,4.0721739838394,2.8044920905331,1.32745138339963,7.28341908464944,9.97667737983678,4.14931175462976,4.42952839321159,3.68922177532713,4.65170927702798,6.18007340111759,4.27796854061666,2.21225730555071,3.16255825724996,3.09406629744561,3.06395645178409,6.30213829109586,6.85601024048599,3.21505552547388,1.95074257006501,1.78368817602071,2.46823530903181,1.8267896946876,0.704015124191131,2.1183207086382,0.882113592219848,2.14352128823924,3.87514624070173,3.98065304525829,3.22305328808468,1.80554989719567,7.28702091574627,1.29797711407357,1.70870880797853,5.36605856704379,1.11116716421827,2.44878994106098,2.46049609897845,1.37266903923914,6.11922347977879,6.71766971153558,6.08079884739465,0.954670618015114,11.704431762502,7.31950081656655,5.61627772273367,3.76358932826044,2.62035076495413,2.83215127408124,1.90102948168273,1.30877970992015,0.777689839750757,1.24267862617385,0,6.72824457197905,7.1147150896552,4.4723773319131,7.4912697617084,3.54807863530634,5.63314745499619,3.51551839078665,1.99232754408851,0.966336483304024,0.576060012515731,6.95224465381992,8.31173382689673,6.16265742988964,7.27556608675652,7.87717460936918,10.3314304486258,8.53387691591779,8.27061352177632,10.0966449948148,8.23033511873998,8.26774718122092,7.89408833991995,10.1022433722346,7.83075244616512,0.680191150845634,1.77588762699252,1.16628013592318,2.18250001273302,2.12508553435409,1.87682475451182,3.29672923681077,2.35805216986972,3.00943262421218,1.12950368523413,0.920650473014354,1.14579102687879,1.71853182343688,0.685082519770642,0.755393897389701,0.675022500231806,0,0.453142408984205,1.55328093525546,18.0589984796467,9.97562183502578,8.70741389346084,5.34834777550247,6.70762120409543,5.69914876195044,3.55594764482584,3.5025959730612,3.53011130550997,4.29585259998456,3.54871019846336,5.28153755881013,4.49479235855436,4.54578582074572,5.34149861287203,3.33405583898152,5.2147946675185,5.01563973205633,4.53294490883637,5.88795680537589,7.88599280486455,2.8396128985494,4.76872379894642,3.77900683244054,4.04670335785922,3.80765735512544,3.65855945745545,2.89376682581627,4.34573164306758,5.61142271657738,4.86403574309114,5.02372860115374,6.95692773388472,4.49316839439301,3.47231899766054,9.74261253957989,4.67863216890817,3.86767897286937,2.86932498103265,0.882365676478062,2.55054619182464 | |||
|short_description=p2@Txnrd1 | |||
}} |
Revision as of 22:04, 4 August 2015
Short description: | p2@Txnrd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Txnrd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 148bp_to_ENSMUST00000167785, NM_001042514, uc007gkb.1_5end |
EntrezGene: | 50493 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.34e-11 | 33 |
neuronal stem cell | 8.34e-11 | 33 |
neuroblast | 8.34e-11 | 33 |
electrically signaling cell | 8.34e-11 | 33 |
electrically responsive cell | 2.74e-08 | 39 |
electrically active cell | 2.74e-08 | 39 |
CNS neuron (sensu Vertebrata) | 5.31e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.31e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 8.95e-08 | 43 |