FFCP PHASE1:Mm9::chr17:45732791..45732816,-: Difference between revisions
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{{FFCP|EntrezGene=63959|HGNC=|MCL_coexpression_id=68|UniProt=E9PVH9|association_with_transcript=0bp_to_ENSMUST00000164618_5end|description=CAGE_peak_14_at_Slc29a1_5end|id=chr17:45732791..45732816,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000893,3.50e-07,6;CL:0002489,3.50e-07,6;CL:0000898,3.50e-07,6;CL:0000809,3.50e-07,6;CL:0000810,3.50e-07,6;CL:0000895,3.50e-07,6;CL:0000808,3.50e-07,6;CL:0000894,3.50e-07,6;CL:0000806,3.50e-07,6;CL:0000807,3.50e-07,6;CL:0000805,3.50e-07,6;CL:0002425,3.50e-07,6;CL:0002436,3.50e-07,6;CL:0002427,3.50e-07,6;CL:0002428,3.50e-07,6;CL:0002429,3.50e-07,6;CL:0002433,3.50e-07,6;CL:0002431,3.50e-07,6;CL:0002432,3.50e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!2.44e-13!24;UBERON:0002370!8.71e-13!23;UBERON:0000974!8.71e-13!23;UBERON:0004807!8.71e-13!23;UBERON:0005058!8.71e-13!23;UBERON:0003351!8.71e-13!23;UBERON:0009113!8.71e-13!23;UBERON:0003295!8.71e-13!23;UBERON:0009722!8.71e-13!23;UBERON:0005562!8.71e-13!23;UBERON:0007690!8.71e-13!23;UBERON:0000072!6.73e-12!27;UBERON:0006562!7.49e-12!24;UBERON:0001557!7.49e-12!24;UBERON:0001042!7.49e-12!24;UBERON:0008814!7.49e-12!24;UBERON:0009145!7.49e-12!24;UBERON:0004177!4.86e-10!29;UBERON:0000063!6.35e-10!35;UBERON:0002368!2.54e-08!60;UBERON:0002530!5.98e-08!65;UBERON:0005057!3.13e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000072,2.37e-17,27;UBERON:0002370,3.62e-17,23;UBERON:0000974,3.62e-17,23;UBERON:0004807,3.62e-17,23;UBERON:0005058,3.62e-17,23;UBERON:0003351,3.62e-17,23;UBERON:0009113,3.62e-17,23;UBERON:0003295,3.62e-17,23;UBERON:0009722,3.62e-17,23;UBERON:0005562,3.62e-17,23;UBERON:0007690,3.62e-17,23;UBERON:0006562,2.18e-16,24;UBERON:0003408,2.18e-16,24;UBERON:0001557,2.18e-16,24;UBERON:0001042,2.18e-16,24;UBERON:0008814,2.18e-16,24;UBERON:0009145,2.18e-16,24;UBERON:0004177,2.69e-13,29;UBERON:0005057,2.69e-13,29;UBERON:0000065,8.01e-11,41;UBERON:0000077,9.46e-11,35;UBERON:0001004,1.60e-10,42;UBERON:0007811,2.08e-10,36;UBERON:0000153,1.85e-08,43;UBERON:0002390,5.16e-08,45;UBERON:0003061,5.16e-08,45;UBERON:0002193,2.05e-07,48;UBERON:0002405,2.05e-07,48;UBERON:0002368,7.06e-07,60|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,1.267098499365,0.468129052643987,13.8686554262659,2.47293692885543,0.513602189793617,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.218025156380447,0,0,0.279972843250725,0,0,0,0.672187598284928,0,0,0,0.202316460859598,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0.274462930807229,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0,0,0.860423876981386,0.679971333707751,0.539703191637817,0,0.448026887097336,0,1.1930122580464,0.259786004602869,1.06001872353102,0.422530259330042,0,2.54805239706646,0,0,0.253359865475099,1.01104889002957,0.22836775943812,0.258937883647172,0.29688427812965,0.346970653532272,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0.662524555381181,0.969750506270444,0,0.878342391034642,0,0,0,0,0.127070227073065,0.299581278809645,0.915001205637253,0.376963056338593,0,0.255715457330331,0.62336413367868,0.486723789203273,0,0.373220911830279,0.758168275301024,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.350296027101508,0,0,0,0,0.219550115291051,0.134206418760372,0,0.102904612379284,0,0,0,0.464473343720877,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.505157755894224,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.819674726883377,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,1.522324745573,0.704015124191131,0.21183207086382,0,1.6488625294148,0.322928853391811,0.482503399425247,0.835606408021955,1.14898629821543,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0.279902904647316,0,0,0,0.406638934253697,0,0,0.218362563746178,0,0.0826534557253359,0,0,0.621339313086926,6.76431526421028,0.149516546043979,0.496375471371293,0.194451188344048,0.258319646955462,0.675824501963113,0.117357238645754,0,0.629156066554265,4.59009829569411,3.74439008135225,0.948033361884535,1.41907650703115,2.15693010046137,2.33857481360031,1.07416017400489,2.38417625737518,0.961563596159751,0.886137163047463,0.504832249740738,0.685861259894999,1.00826185136841,0.682205165178267,0.577271049841977,0.701261413089414,0,0,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0.367687016900028,0,0,0,0.252697211763798,0,0,0,0.192075457214608,0.287177344778066,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0,0.0941093804153306,0,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,1.53030665655075,0.220591419119515,0.927471342481686|short_description=p14@Slc29a1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:63959 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PVH9 | |||
|association_with_transcript=0bp_to_ENSMUST00000164618_5end | |||
|cluster_id=chr17:45732791..45732816,- | |||
|description=CAGE_peak_14_at_Slc29a1_5end | |||
|id=chr17:45732791..45732816,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,3.50e-07,6;CL:0002489,3.50e-07,6;CL:0000898,3.50e-07,6;CL:0000809,3.50e-07,6;CL:0000810,3.50e-07,6;CL:0000895,3.50e-07,6;CL:0000808,3.50e-07,6;CL:0000894,3.50e-07,6;CL:0000806,3.50e-07,6;CL:0000807,3.50e-07,6;CL:0000805,3.50e-07,6;CL:0002425,3.50e-07,6;CL:0002436,3.50e-07,6;CL:0002427,3.50e-07,6;CL:0002428,3.50e-07,6;CL:0002429,3.50e-07,6;CL:0002433,3.50e-07,6;CL:0002431,3.50e-07,6;CL:0002432,3.50e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!2.44e-13!24;UBERON:0002370!8.71e-13!23;UBERON:0000974!8.71e-13!23;UBERON:0004807!8.71e-13!23;UBERON:0005058!8.71e-13!23;UBERON:0003351!8.71e-13!23;UBERON:0009113!8.71e-13!23;UBERON:0003295!8.71e-13!23;UBERON:0009722!8.71e-13!23;UBERON:0005562!8.71e-13!23;UBERON:0007690!8.71e-13!23;UBERON:0000072!6.73e-12!27;UBERON:0006562!7.49e-12!24;UBERON:0001557!7.49e-12!24;UBERON:0001042!7.49e-12!24;UBERON:0008814!7.49e-12!24;UBERON:0009145!7.49e-12!24;UBERON:0004177!4.86e-10!29;UBERON:0000063!6.35e-10!35;UBERON:0002368!2.54e-08!60;UBERON:0002530!5.98e-08!65;UBERON:0005057!3.13e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,2.37e-17,27;UBERON:0002370,3.62e-17,23;UBERON:0000974,3.62e-17,23;UBERON:0004807,3.62e-17,23;UBERON:0005058,3.62e-17,23;UBERON:0003351,3.62e-17,23;UBERON:0009113,3.62e-17,23;UBERON:0003295,3.62e-17,23;UBERON:0009722,3.62e-17,23;UBERON:0005562,3.62e-17,23;UBERON:0007690,3.62e-17,23;UBERON:0006562,2.18e-16,24;UBERON:0003408,2.18e-16,24;UBERON:0001557,2.18e-16,24;UBERON:0001042,2.18e-16,24;UBERON:0008814,2.18e-16,24;UBERON:0009145,2.18e-16,24;UBERON:0004177,2.69e-13,29;UBERON:0005057,2.69e-13,29;UBERON:0000065,8.01e-11,41;UBERON:0000077,9.46e-11,35;UBERON:0001004,1.60e-10,42;UBERON:0007811,2.08e-10,36;UBERON:0000153,1.85e-08,43;UBERON:0002390,5.16e-08,45;UBERON:0003061,5.16e-08,45;UBERON:0002193,2.05e-07,48;UBERON:0002405,2.05e-07,48;UBERON:0002368,7.06e-07,60 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,1.267098499365,0.468129052643987,13.8686554262659,2.47293692885543,0.513602189793617,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.218025156380447,0,0,0.279972843250725,0,0,0,0.672187598284928,0,0,0,0.202316460859598,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0.274462930807229,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0.075726193333184,0,0,0.860423876981386,0.679971333707751,0.539703191637817,0,0.448026887097336,0,1.1930122580464,0.259786004602869,1.06001872353102,0.422530259330042,0,2.54805239706646,0,0,0.253359865475099,1.01104889002957,0.22836775943812,0.258937883647172,0.29688427812965,0.346970653532272,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0.662524555381181,0.969750506270444,0,0.878342391034642,0,0,0,0,0.127070227073065,0.299581278809645,0.915001205637253,0.376963056338593,0,0.255715457330331,0.62336413367868,0.486723789203273,0,0.373220911830279,0.758168275301024,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.350296027101508,0,0,0,0,0.219550115291051,0.134206418760372,0,0.102904612379284,0,0,0,0.464473343720877,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.505157755894224,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0.819674726883377,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,1.522324745573,0.704015124191131,0.21183207086382,0,1.6488625294148,0.322928853391811,0.482503399425247,0.835606408021955,1.14898629821543,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0.279902904647316,0,0,0,0.406638934253697,0,0,0.218362563746178,0,0.0826534557253359,0,0,0.621339313086926,6.76431526421028,0.149516546043979,0.496375471371293,0.194451188344048,0.258319646955462,0.675824501963113,0.117357238645754,0,0.629156066554265,4.59009829569411,3.74439008135225,0.948033361884535,1.41907650703115,2.15693010046137,2.33857481360031,1.07416017400489,2.38417625737518,0.961563596159751,0.886137163047463,0.504832249740738,0.685861259894999,1.00826185136841,0.682205165178267,0.577271049841977,0.701261413089414,0,0,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0.367687016900028,0,0,0,0.252697211763798,0,0,0,0.192075457214608,0.287177344778066,0,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0,0.0941093804153306,0,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,1.53030665655075,0.220591419119515,0.927471342481686 | |||
|short_description=p14@Slc29a1 | |||
}} |
Revision as of 23:02, 4 August 2015
Short description: | p14@Slc29a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Slc29a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 0bp_to_ENSMUST00000164618_5end |
EntrezGene: | 63959 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 3.50e-07 | 6 |
double negative thymocyte | 3.50e-07 | 6 |
naive T cell | 3.50e-07 | 6 |
double-positive, alpha-beta thymocyte | 3.50e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 3.50e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.50e-07 | 6 |
DN4 thymocyte | 3.50e-07 | 6 |
DN1 thymic pro-T cell | 3.50e-07 | 6 |
DN2 thymocyte | 3.50e-07 | 6 |
DN3 thymocyte | 3.50e-07 | 6 |
immature single positive thymocyte | 3.50e-07 | 6 |
early T lineage precursor | 3.50e-07 | 6 |
mature CD4 single-positive thymocyte | 3.50e-07 | 6 |
resting double-positive thymocyte | 3.50e-07 | 6 |
double-positive blast | 3.50e-07 | 6 |
CD69-positive double-positive thymocyte | 3.50e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 3.50e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.50e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 3.50e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 2.37e-17 | 27 |
thymus | 3.62e-17 | 23 |
neck | 3.62e-17 | 23 |
respiratory system epithelium | 3.62e-17 | 23 |
hemolymphoid system gland | 3.62e-17 | 23 |
pharyngeal epithelium | 3.62e-17 | 23 |
thymic region | 3.62e-17 | 23 |
pharyngeal gland | 3.62e-17 | 23 |
entire pharyngeal arch endoderm | 3.62e-17 | 23 |
thymus primordium | 3.62e-17 | 23 |
early pharyngeal endoderm | 3.62e-17 | 23 |
pharynx | 2.18e-16 | 24 |
gland of gut | 2.18e-16 | 24 |
upper respiratory tract | 2.18e-16 | 24 |
chordate pharynx | 2.18e-16 | 24 |
pharyngeal arch system | 2.18e-16 | 24 |
pharyngeal region of foregut | 2.18e-16 | 24 |
hemopoietic organ | 2.69e-13 | 29 |
immune organ | 2.69e-13 | 29 |
respiratory tract | 8.01e-11 | 41 |
mixed endoderm/mesoderm-derived structure | 9.46e-11 | 35 |
respiratory system | 1.60e-10 | 42 |
craniocervical region | 2.08e-10 | 36 |
anterior region of body | 1.85e-08 | 43 |
hematopoietic system | 5.16e-08 | 45 |
blood island | 5.16e-08 | 45 |
hemolymphoid system | 2.05e-07 | 48 |
immune system | 2.05e-07 | 48 |
endocrine gland | 7.06e-07 | 60 |