FFCP PHASE1:Mm9::chr17:46300102..46300132,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=56055|HGNC=|MCL_coexpression_id=1223|UniProt=|association_with_transcript=-42bp_to_ENSMUST00000169955_5end|description=CAGE_peak_6_at_Gtpbp2_5end|id=chr17:46300102..46300132,+|ontology_enrichment_celltype=CL:0000838!3.14e-11!12;CL:0000084!1.80e-10!11;CL:0000827!1.80e-10!11;CL:0000542!4.89e-10!13;CL:0000051!4.89e-10!13;CL:0000791!5.07e-10!9;CL:0000789!5.07e-10!9;CL:0002420!5.07e-10!9;CL:0002419!5.07e-10!9;CL:0000790!5.07e-10!9;CL:0002031!1.12e-09!25;CL:0000738!1.16e-09!17;CL:0002087!1.16e-09!17;CL:0000624!4.91e-09!8;CL:0000988!3.24e-08!32;CL:0002032!3.24e-08!32;CL:0000037!3.24e-08!32;CL:0000566!3.24e-08!32;CL:0000837!3.24e-08!32;CL:0000063!1.75e-07!66;CL:0000893!5.89e-07!6;CL:0002489!5.89e-07!6;CL:0000898!5.89e-07!6;CL:0000809!5.89e-07!6;CL:0000810!5.89e-07!6;CL:0000895!5.89e-07!6;CL:0000808!5.89e-07!6;CL:0000894!5.89e-07!6;CL:0000806!5.89e-07!6;CL:0000807!5.89e-07!6;CL:0000805!5.89e-07!6;CL:0002425!5.89e-07!6;CL:0002436!5.89e-07!6;CL:0002427!5.89e-07!6;CL:0002428!5.89e-07!6;CL:0002429!5.89e-07!6;CL:0002433!5.89e-07!6;CL:0002431!5.89e-07!6;CL:0002432!5.89e-07!6|ontology_enrichment_celltype_v019_2=CL:0000791,1.53e-25,9;CL:0000789,1.53e-25,9;CL:0002420,1.53e-25,9;CL:0002419,1.53e-25,9;CL:0000790,1.53e-25,9;CL:0000624,3.54e-22,8;CL:0000084,1.08e-20,11;CL:0000827,1.08e-20,11;CL:0000838,7.14e-19,12;CL:0000542,2.48e-17,13;CL:0000051,2.48e-17,13;CL:0000738,2.36e-16,17;CL:0002087,2.36e-16,17;CL:0000893,3.33e-15,6;CL:0002489,3.33e-15,6;CL:0000898,3.33e-15,6;CL:0000809,3.33e-15,6;CL:0000810,3.33e-15,6;CL:0000895,3.33e-15,6;CL:0000808,3.33e-15,6;CL:0000894,3.33e-15,6;CL:0000806,3.33e-15,6;CL:0000807,3.33e-15,6;CL:0000805,3.33e-15,6;CL:0002425,3.33e-15,6;CL:0002436,3.33e-15,6;CL:0002427,3.33e-15,6;CL:0002428,3.33e-15,6;CL:0002429,3.33e-15,6;CL:0002433,3.33e-15,6;CL:0002431,3.33e-15,6;CL:0002432,3.33e-15,6;CL:0002031,4.18e-13,25;CL:0000988,6.18e-12,32;CL:0002032,6.18e-12,32;CL:0000037,6.18e-12,32;CL:0000837,6.18e-12,32;CL:0002320,2.89e-09,46;CL:0000134,2.89e-09,46;CL:0000219,1.44e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.02e-10!48;UBERON:0001007!3.67e-10!128;UBERON:0001555!3.67e-10!128;UBERON:0007026!3.67e-10!128;UBERON:0004119!9.83e-10!130;UBERON:0000925!9.83e-10!130;UBERON:0006595!9.83e-10!130;UBERON:0000065!1.47e-09!41;UBERON:0004921!3.88e-09!126;UBERON:0004185!3.88e-09!126;UBERON:0001004!3.95e-09!42;UBERON:0006562!5.41e-09!24;UBERON:0001557!5.41e-09!24;UBERON:0001042!5.41e-09!24;UBERON:0008814!5.41e-09!24;UBERON:0009145!5.41e-09!24;UBERON:0002390!8.09e-09!45;UBERON:0003061!8.09e-09!45;UBERON:0002370!1.39e-08!23;UBERON:0000974!1.39e-08!23;UBERON:0004807!1.39e-08!23;UBERON:0005058!1.39e-08!23;UBERON:0003351!1.39e-08!23;UBERON:0009113!1.39e-08!23;UBERON:0003295!1.39e-08!23;UBERON:0009722!1.39e-08!23;UBERON:0005562!1.39e-08!23;UBERON:0007690!1.39e-08!23;UBERON:0004177!2.00e-08!29;UBERON:0000344!3.89e-08!15;UBERON:0005911!4.59e-08!69;UBERON:0003408!5.36e-08!24;UBERON:0000072!2.33e-07!27;UBERON:0004923!5.55e-07!24;UBERON:0002405!6.75e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.84e-11,15;UBERON:0001242,1.79e-09,13;UBERON:0001262,1.79e-09,13;UBERON:0004786,1.79e-09,13;UBERON:0002384,2.89e-09,46|phase1_expression=0,4.18770489167233,0.909998478779072,0.60492842261366,0,1.17515490338323,1.86890112476421,4.13194635013044,1.12630977721333,0.468129052643987,3.08192342805909,1.11681022593471,5.30722262786738,6.6439505838438,0.666219523631325,0.607425802169478,0,1.26184866143295,0.822686601634433,0,0.17008658030214,0.0992909512008853,0.261199789138935,0.639969691173627,1.60586496747019,3.44539178469012,0.86152399231815,2.80112602491656,0.570070258369122,1.00812051903972,3.10422714917427,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,3.62681071005672,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,1.86391761218122,0,0,0.255457055208591,0,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.402619256281115,0,0,1.32167513193519,0,0,0,0,0,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0.648414149624083,0.597423819763102,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0.549122826376163,0,0,0,0,0,0,1.29327233116623,0,0,0,0,0.167506257441816,0.238043640886014,0,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.578596234326046,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.188368457004691,0.27338845544205,0,0.339956859987711,1.11961161858926,0.138199973804424,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0,0,0.26175594198403,1.16653475962614,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0.316011120628178,0,0.205421914329655,0.389762468933385,0.179026695667481,0,0.240390899039938,0.443068581523732,0.403865799792591,0.533447646584999,0.100826185136841,0.584747284438515,0.192423683280659,0.584384510907845,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0|short_description=p6@Gtpbp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56055 | |||
|HGNC= | |||
|MCL_coexpression_id=1223 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-42bp_to_ENSMUST00000169955_5end | |||
|cluster_id=chr17:46300102..46300132,+ | |||
|description=CAGE_peak_6_at_Gtpbp2_5end | |||
|id=chr17:46300102..46300132,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.14e-11!12;CL:0000084!1.80e-10!11;CL:0000827!1.80e-10!11;CL:0000542!4.89e-10!13;CL:0000051!4.89e-10!13;CL:0000791!5.07e-10!9;CL:0000789!5.07e-10!9;CL:0002420!5.07e-10!9;CL:0002419!5.07e-10!9;CL:0000790!5.07e-10!9;CL:0002031!1.12e-09!25;CL:0000738!1.16e-09!17;CL:0002087!1.16e-09!17;CL:0000624!4.91e-09!8;CL:0000988!3.24e-08!32;CL:0002032!3.24e-08!32;CL:0000037!3.24e-08!32;CL:0000566!3.24e-08!32;CL:0000837!3.24e-08!32;CL:0000063!1.75e-07!66;CL:0000893!5.89e-07!6;CL:0002489!5.89e-07!6;CL:0000898!5.89e-07!6;CL:0000809!5.89e-07!6;CL:0000810!5.89e-07!6;CL:0000895!5.89e-07!6;CL:0000808!5.89e-07!6;CL:0000894!5.89e-07!6;CL:0000806!5.89e-07!6;CL:0000807!5.89e-07!6;CL:0000805!5.89e-07!6;CL:0002425!5.89e-07!6;CL:0002436!5.89e-07!6;CL:0002427!5.89e-07!6;CL:0002428!5.89e-07!6;CL:0002429!5.89e-07!6;CL:0002433!5.89e-07!6;CL:0002431!5.89e-07!6;CL:0002432!5.89e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.53e-25,9;CL:0000789,1.53e-25,9;CL:0002420,1.53e-25,9;CL:0002419,1.53e-25,9;CL:0000790,1.53e-25,9;CL:0000624,3.54e-22,8;CL:0000084,1.08e-20,11;CL:0000827,1.08e-20,11;CL:0000838,7.14e-19,12;CL:0000542,2.48e-17,13;CL:0000051,2.48e-17,13;CL:0000738,2.36e-16,17;CL:0002087,2.36e-16,17;CL:0000893,3.33e-15,6;CL:0002489,3.33e-15,6;CL:0000898,3.33e-15,6;CL:0000809,3.33e-15,6;CL:0000810,3.33e-15,6;CL:0000895,3.33e-15,6;CL:0000808,3.33e-15,6;CL:0000894,3.33e-15,6;CL:0000806,3.33e-15,6;CL:0000807,3.33e-15,6;CL:0000805,3.33e-15,6;CL:0002425,3.33e-15,6;CL:0002436,3.33e-15,6;CL:0002427,3.33e-15,6;CL:0002428,3.33e-15,6;CL:0002429,3.33e-15,6;CL:0002433,3.33e-15,6;CL:0002431,3.33e-15,6;CL:0002432,3.33e-15,6;CL:0002031,4.18e-13,25;CL:0000988,6.18e-12,32;CL:0002032,6.18e-12,32;CL:0000037,6.18e-12,32;CL:0000837,6.18e-12,32;CL:0002320,2.89e-09,46;CL:0000134,2.89e-09,46;CL:0000219,1.44e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.02e-10!48;UBERON:0001007!3.67e-10!128;UBERON:0001555!3.67e-10!128;UBERON:0007026!3.67e-10!128;UBERON:0004119!9.83e-10!130;UBERON:0000925!9.83e-10!130;UBERON:0006595!9.83e-10!130;UBERON:0000065!1.47e-09!41;UBERON:0004921!3.88e-09!126;UBERON:0004185!3.88e-09!126;UBERON:0001004!3.95e-09!42;UBERON:0006562!5.41e-09!24;UBERON:0001557!5.41e-09!24;UBERON:0001042!5.41e-09!24;UBERON:0008814!5.41e-09!24;UBERON:0009145!5.41e-09!24;UBERON:0002390!8.09e-09!45;UBERON:0003061!8.09e-09!45;UBERON:0002370!1.39e-08!23;UBERON:0000974!1.39e-08!23;UBERON:0004807!1.39e-08!23;UBERON:0005058!1.39e-08!23;UBERON:0003351!1.39e-08!23;UBERON:0009113!1.39e-08!23;UBERON:0003295!1.39e-08!23;UBERON:0009722!1.39e-08!23;UBERON:0005562!1.39e-08!23;UBERON:0007690!1.39e-08!23;UBERON:0004177!2.00e-08!29;UBERON:0000344!3.89e-08!15;UBERON:0005911!4.59e-08!69;UBERON:0003408!5.36e-08!24;UBERON:0000072!2.33e-07!27;UBERON:0004923!5.55e-07!24;UBERON:0002405!6.75e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.84e-11,15;UBERON:0001242,1.79e-09,13;UBERON:0001262,1.79e-09,13;UBERON:0004786,1.79e-09,13;UBERON:0002384,2.89e-09,46 | |||
|phase1_expression=0,4.18770489167233,0.909998478779072,0.60492842261366,0,1.17515490338323,1.86890112476421,4.13194635013044,1.12630977721333,0.468129052643987,3.08192342805909,1.11681022593471,5.30722262786738,6.6439505838438,0.666219523631325,0.607425802169478,0,1.26184866143295,0.822686601634433,0,0.17008658030214,0.0992909512008853,0.261199789138935,0.639969691173627,1.60586496747019,3.44539178469012,0.86152399231815,2.80112602491656,0.570070258369122,1.00812051903972,3.10422714917427,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,3.62681071005672,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,1.86391761218122,0,0,0.255457055208591,0,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.402619256281115,0,0,1.32167513193519,0,0,0,0,0,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0.648414149624083,0.597423819763102,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0.549122826376163,0,0,0,0,0,0,1.29327233116623,0,0,0,0,0.167506257441816,0.238043640886014,0,0.472905432318573,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.578596234326046,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.188368457004691,0.27338845544205,0,0.339956859987711,1.11961161858926,0.138199973804424,0.954670618015114,0,0.203319467126849,0,0,0.218362563746178,0,0,0.26175594198403,1.16653475962614,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0.316011120628178,0,0.205421914329655,0.389762468933385,0.179026695667481,0,0.240390899039938,0.443068581523732,0.403865799792591,0.533447646584999,0.100826185136841,0.584747284438515,0.192423683280659,0.584384510907845,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p6@Gtpbp2 | |||
}} |
Revision as of 23:23, 4 August 2015
Short description: | p6@Gtpbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gtpbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1223 |
Association with transcript: | -42bp_to_ENSMUST00000169955_5end |
EntrezGene: | 56055 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 5.84e-11 | 15 |
intestinal mucosa | 1.79e-09 | 13 |
wall of intestine | 1.79e-09 | 13 |
gastrointestinal system mucosa | 1.79e-09 | 13 |
connective tissue | 2.89e-09 | 46 |