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FFCP PHASE1:Mm9::chr12:38606893..38606928,+: Difference between revisions

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{{FFCP|EntrezGene=217480|HGNC=|MCL_coexpression_id=935|UniProt=Q3TSN3,Q6NS52|association_with_transcript=132bp_to_ENSMUST00000084204,uc007nki.1,uc007nkj.1_5end|description=CAGE_peak_4_at_Dgkb_5end|id=chr12:38606893..38606928,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.12e-17!71;UBERON:0003075!1.12e-17!71;UBERON:0007284!1.12e-17!71;UBERON:0000033!1.23e-15!63;UBERON:0004121!8.18e-15!102;UBERON:0000924!8.18e-15!102;UBERON:0006601!8.18e-15!102;UBERON:0001049!9.20e-13!52;UBERON:0005068!9.20e-13!52;UBERON:0006241!9.20e-13!52;UBERON:0007135!9.20e-13!52;UBERON:0000955!2.04e-12!50;UBERON:0006238!2.04e-12!50;UBERON:0001017!2.51e-12!73;UBERON:0005743!2.51e-12!73;UBERON:0000073!8.99e-12!75;UBERON:0001016!8.99e-12!75;UBERON:0002616!9.43e-12!49;UBERON:0003056!1.78e-11!49;UBERON:0002020!4.22e-10!34;UBERON:0003080!5.76e-09!40;UBERON:0002780!2.38e-08!39;UBERON:0001890!2.38e-08!39;UBERON:0006240!2.38e-08!39;UBERON:0002021!4.95e-08!10;UBERON:0000411!4.95e-08!10;UBERON:0001950!4.95e-08!10;UBERON:0002791!5.64e-08!29;UBERON:0003528!5.64e-08!29;UBERON:0001893!5.64e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.42e-22,54;UBERON:0001049,1.16e-19,52;UBERON:0005068,1.16e-19,52;UBERON:0006241,1.16e-19,52;UBERON:0007135,1.16e-19,52;UBERON:0002346,4.69e-18,64;UBERON:0003075,4.69e-18,64;UBERON:0007284,4.69e-18,64;UBERON:0001017,7.72e-18,73;UBERON:0001016,4.25e-17,75;UBERON:0000955,3.69e-16,47;UBERON:0006238,3.69e-16,47;UBERON:0002020,3.97e-16,34;UBERON:0002021,4.95e-15,10;UBERON:0000411,4.95e-15,10;UBERON:0001950,4.95e-15,10;UBERON:0002616,5.76e-15,46;UBERON:0010371,1.10e-14,73;UBERON:0004121,2.95e-14,95;UBERON:0000924,2.95e-14,95;UBERON:0006601,2.95e-14,95;UBERON:0003528,1.40e-12,29;UBERON:0002791,1.40e-12,29;UBERON:0001893,1.40e-12,29;UBERON:0003080,5.89e-12,40;UBERON:0003056,6.42e-12,49;UBERON:0002619,1.88e-11,17;UBERON:0010314,1.98e-11,92;UBERON:0002780,7.39e-11,39;UBERON:0001890,7.39e-11,39;UBERON:0006240,7.39e-11,39;UBERON:0000956,1.67e-10,21;UBERON:0001869,1.67e-10,21;UBERON:0000203,1.67e-10,21;UBERON:0003076,3.52e-09,12;UBERON:0003057,3.52e-09,12;UBERON:0000025,2.86e-08,114;UBERON:0002950,2.48e-07,4;UBERON:0001891,2.48e-07,4;UBERON:0009616,2.48e-07,4;UBERON:0010286,2.48e-07,4;UBERON:0004111,3.85e-07,122|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0.285650984403804,1.32521124570968,0.244981598429908,0.191690942036473,0,3.30347642998166,4.97980618532232,7.52672012955593,0.527545150920775,0.274462930807229,0,2.51264699101243,5.06486349028512,6.72312290217964,3.83017161115768,3.55929201997757,1.86399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,1.1875371125186,0.346970653532272,0.913396434936424,0.230615497256059,0.753613202763113,1.29347577849275,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,2.04946557908083,1.46612694769419,0,0,0,0,14.5296920222678,7.77751024791665,0.753926112677186,9.21268897019065,5.11430914660661,8.10373373782284,7.78758062725237,0.305518091550949,0.124406970610093,0,0.841767423545896,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,1.29269348387523,1.66547836370305,0.937017245597288,1.29351685369508,0,0.378212160335639,0.351902248327898,0,0,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,15.1408762966172,1.23485534855141,0,0.264450566663544,0,1.16118335930219,1.67527699718721,1.21010114774006,0.889512175379481,1.71203063501303,0,2.47048432086016,0.251335208800269,0.795825888164603,0.974820435595601,0,0,0.398282546508734,0,0.114248512609729,0,0,0.387904974335251,0.350679099451593,0.189709611372772,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,1.46668478797823,1.18821560042632,2.11221223459652,1.50755631697634,1.19021820443007,0.390267295715598,3.15270288212382,0.44292937929755,0.637819074629948,0.81931657357869,0.172684981865896,0.289298117163023,0,0,0,0,6.74312477948726,4.57125577709592,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0.283076530788832,0.809621403349789,0.292255857911312,0,12.5315313404505,0,0.712262414669021,1.14020871547503,0.659880491890142,0,0,0,0.565815239267694,0,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0,0,0.709360934569094,0.535106452806212,0.822745103010605,0,0,0,0.441056796109924,0.49465875882444,0,0.241251699712623,0,0,0.582961673259701,6.48988557036784,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.609958401380546,0.432021363287205,0.627264888043406,0,0.404593039154462,0.0826534557253359,0,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.772758376128762,0,0.183151624267265,0,0,5.64751842617067,4.14292712856459,5.15605962095457,3.43706364687375,7.53590771747707,3.0215755895588,2.02506750069542,4.5032120322422,4.07828168085784,2.5888015587591,0.103787347584177,1.19707462020309,0.341467211508268,1.45864030240976,0.209613162627982,0.551530525350042,1.11123363900808,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,0.943131706930381,0.842773567228942,0.89635213366817,0.689225627467359,1.42888107384922,0.579421629724277,0.578727661391115,1.23625770240992,0.588795680537589,0.685738504770831,0.70990322463735,0.715308569841963,1.30811774969096,0.752875043322645,0.507687647350059,0.914639864363863,1.05227884575137,0.407412341537585,1.12228454331548,0.830445126869219,0.788035859004508,1.22769312950907,0.77468420592983,0.771626443924566,0.499621155875892,0.935726433781634,0.644613162144895,0.57386499620653,0.882365676478062,0.463735671240843|short_description=p4@Dgkb}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:217480
|HGNC=
|MCL_coexpression_id=935
|TSSclassifier=NA
|UniProt=uniprot:Q3TSN3,uniprot:Q6NS52
|association_with_transcript=132bp_to_ENSMUST00000084204,uc007nki.1,uc007nkj.1_5end
|cluster_id=chr12:38606893..38606928,+
|description=CAGE_peak_4_at_Dgkb_5end
|id=chr12:38606893..38606928,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.12e-17!71;UBERON:0003075!1.12e-17!71;UBERON:0007284!1.12e-17!71;UBERON:0000033!1.23e-15!63;UBERON:0004121!8.18e-15!102;UBERON:0000924!8.18e-15!102;UBERON:0006601!8.18e-15!102;UBERON:0001049!9.20e-13!52;UBERON:0005068!9.20e-13!52;UBERON:0006241!9.20e-13!52;UBERON:0007135!9.20e-13!52;UBERON:0000955!2.04e-12!50;UBERON:0006238!2.04e-12!50;UBERON:0001017!2.51e-12!73;UBERON:0005743!2.51e-12!73;UBERON:0000073!8.99e-12!75;UBERON:0001016!8.99e-12!75;UBERON:0002616!9.43e-12!49;UBERON:0003056!1.78e-11!49;UBERON:0002020!4.22e-10!34;UBERON:0003080!5.76e-09!40;UBERON:0002780!2.38e-08!39;UBERON:0001890!2.38e-08!39;UBERON:0006240!2.38e-08!39;UBERON:0002021!4.95e-08!10;UBERON:0000411!4.95e-08!10;UBERON:0001950!4.95e-08!10;UBERON:0002791!5.64e-08!29;UBERON:0003528!5.64e-08!29;UBERON:0001893!5.64e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.42e-22,54;UBERON:0001049,1.16e-19,52;UBERON:0005068,1.16e-19,52;UBERON:0006241,1.16e-19,52;UBERON:0007135,1.16e-19,52;UBERON:0002346,4.69e-18,64;UBERON:0003075,4.69e-18,64;UBERON:0007284,4.69e-18,64;UBERON:0001017,7.72e-18,73;UBERON:0001016,4.25e-17,75;UBERON:0000955,3.69e-16,47;UBERON:0006238,3.69e-16,47;UBERON:0002020,3.97e-16,34;UBERON:0002021,4.95e-15,10;UBERON:0000411,4.95e-15,10;UBERON:0001950,4.95e-15,10;UBERON:0002616,5.76e-15,46;UBERON:0010371,1.10e-14,73;UBERON:0004121,2.95e-14,95;UBERON:0000924,2.95e-14,95;UBERON:0006601,2.95e-14,95;UBERON:0003528,1.40e-12,29;UBERON:0002791,1.40e-12,29;UBERON:0001893,1.40e-12,29;UBERON:0003080,5.89e-12,40;UBERON:0003056,6.42e-12,49;UBERON:0002619,1.88e-11,17;UBERON:0010314,1.98e-11,92;UBERON:0002780,7.39e-11,39;UBERON:0001890,7.39e-11,39;UBERON:0006240,7.39e-11,39;UBERON:0000956,1.67e-10,21;UBERON:0001869,1.67e-10,21;UBERON:0000203,1.67e-10,21;UBERON:0003076,3.52e-09,12;UBERON:0003057,3.52e-09,12;UBERON:0000025,2.86e-08,114;UBERON:0002950,2.48e-07,4;UBERON:0001891,2.48e-07,4;UBERON:0009616,2.48e-07,4;UBERON:0010286,2.48e-07,4;UBERON:0004111,3.85e-07,122
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0.285650984403804,1.32521124570968,0.244981598429908,0.191690942036473,0,3.30347642998166,4.97980618532232,7.52672012955593,0.527545150920775,0.274462930807229,0,2.51264699101243,5.06486349028512,6.72312290217964,3.83017161115768,3.55929201997757,1.86399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,1.1875371125186,0.346970653532272,0.913396434936424,0.230615497256059,0.753613202763113,1.29347577849275,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,2.04946557908083,1.46612694769419,0,0,0,0,14.5296920222678,7.77751024791665,0.753926112677186,9.21268897019065,5.11430914660661,8.10373373782284,7.78758062725237,0.305518091550949,0.124406970610093,0,0.841767423545896,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,1.29269348387523,1.66547836370305,0.937017245597288,1.29351685369508,0,0.378212160335639,0.351902248327898,0,0,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0,15.1408762966172,1.23485534855141,0,0.264450566663544,0,1.16118335930219,1.67527699718721,1.21010114774006,0.889512175379481,1.71203063501303,0,2.47048432086016,0.251335208800269,0.795825888164603,0.974820435595601,0,0,0.398282546508734,0,0.114248512609729,0,0,0.387904974335251,0.350679099451593,0.189709611372772,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,1.46668478797823,1.18821560042632,2.11221223459652,1.50755631697634,1.19021820443007,0.390267295715598,3.15270288212382,0.44292937929755,0.637819074629948,0.81931657357869,0.172684981865896,0.289298117163023,0,0,0,0,6.74312477948726,4.57125577709592,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0.283076530788832,0.809621403349789,0.292255857911312,0,12.5315313404505,0,0.712262414669021,1.14020871547503,0.659880491890142,0,0,0,0.565815239267694,0,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0,0,0.709360934569094,0.535106452806212,0.822745103010605,0,0,0,0.441056796109924,0.49465875882444,0,0.241251699712623,0,0,0.582961673259701,6.48988557036784,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.609958401380546,0.432021363287205,0.627264888043406,0,0.404593039154462,0.0826534557253359,0,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.772758376128762,0,0.183151624267265,0,0,5.64751842617067,4.14292712856459,5.15605962095457,3.43706364687375,7.53590771747707,3.0215755895588,2.02506750069542,4.5032120322422,4.07828168085784,2.5888015587591,0.103787347584177,1.19707462020309,0.341467211508268,1.45864030240976,0.209613162627982,0.551530525350042,1.11123363900808,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,0.943131706930381,0.842773567228942,0.89635213366817,0.689225627467359,1.42888107384922,0.579421629724277,0.578727661391115,1.23625770240992,0.588795680537589,0.685738504770831,0.70990322463735,0.715308569841963,1.30811774969096,0.752875043322645,0.507687647350059,0.914639864363863,1.05227884575137,0.407412341537585,1.12228454331548,0.830445126869219,0.788035859004508,1.22769312950907,0.77468420592983,0.771626443924566,0.499621155875892,0.935726433781634,0.644613162144895,0.57386499620653,0.882365676478062,0.463735671240843
|short_description=p4@Dgkb
}}

Revision as of 00:43, 5 August 2015

Short description:p4@Dgkb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Dgkb_5end
Coexpression cluster:MCL_coexpression_mm9:935
Association with transcript: 132bp_to_ENSMUST00000084204, uc007nki.1, uc007nkj.1_5end
EntrezGene:217480
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p4@Dgkb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.53
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.42e-2254
neural tube1.16e-1952
neural rod1.16e-1952
future spinal cord1.16e-1952
neural keel1.16e-1952
neurectoderm4.69e-1864
neural plate4.69e-1864
presumptive neural plate4.69e-1864
central nervous system7.72e-1873
nervous system4.25e-1775
brain3.69e-1647
future brain3.69e-1647
gray matter3.97e-1634
occipital lobe4.95e-1510
visual cortex4.95e-1510
neocortex4.95e-1510
regional part of brain5.76e-1546
ecto-epithelium1.10e-1473
ectoderm-derived structure2.95e-1495
ectoderm2.95e-1495
presumptive ectoderm2.95e-1495
brain grey matter1.40e-1229
regional part of telencephalon1.40e-1229
telencephalon1.40e-1229
anterior neural tube5.89e-1240
pre-chordal neural plate6.42e-1249
regional part of cerebral cortex1.88e-1117
structure with developmental contribution from neural crest1.98e-1192
regional part of forebrain7.39e-1139
forebrain7.39e-1139
future forebrain7.39e-1139
cerebral cortex1.67e-1021
cerebral hemisphere1.67e-1021
pallium1.67e-1021
posterior neural tube3.52e-0912
chordal neural plate3.52e-0912
tube2.86e-08114
regional part of midbrain2.48e-074
midbrain2.48e-074
presumptive midbrain2.48e-074
midbrain neural tube2.48e-074
anatomical conduit3.85e-07122
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