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FFCP PHASE1:Mm9::chr4:140517319..140517330,+: Difference between revisions

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{{FFCP|EntrezGene=67680|HGNC=|UniProt=|association_with_transcript=1bp_to_ENSMUST00000125780_5end|description=CAGE_peak_2_at_Sdhb_5end|id=chr4:140517319..140517330,+|ontology_enrichment_celltype=CL:0000117!4.36e-12!23;CL:0000337!4.36e-12!23;CL:0000221!5.08e-10!44;CL:0000133!5.08e-10!44;CL:0000540!1.09e-09!33;CL:0000047!1.09e-09!33;CL:0000031!1.09e-09!33;CL:0000404!1.09e-09!33;CL:0002319!1.33e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.33e-12,23;CL:0000337,4.33e-12,23;CL:0000221,5.05e-10,44;CL:0000133,5.05e-10,44;CL:0000540,1.08e-09,33;CL:0000047,1.08e-09,33;CL:0000031,1.08e-09,33;CL:0000404,1.08e-09,33;CL:0002319,1.32e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.12e-12!34;UBERON:0000073!1.49e-11!75;UBERON:0001016!1.49e-11!75;UBERON:0001017!6.23e-11!73;UBERON:0005743!6.23e-11!73;UBERON:0001049!3.10e-09!52;UBERON:0005068!3.10e-09!52;UBERON:0006241!3.10e-09!52;UBERON:0007135!3.10e-09!52;UBERON:0002791!6.54e-09!29;UBERON:0003528!6.54e-09!29;UBERON:0001893!6.54e-09!29;UBERON:0002780!7.50e-08!39;UBERON:0001890!7.50e-08!39;UBERON:0006240!7.50e-08!39;UBERON:0002616!1.11e-07!49;UBERON:0003080!1.27e-07!40;UBERON:0000955!1.62e-07!50;UBERON:0006238!1.62e-07!50;UBERON:0004121!4.67e-07!102;UBERON:0000924!4.67e-07!102;UBERON:0006601!4.67e-07!102;UBERON:0000033!8.44e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.06e-12,34;UBERON:0001016,1.49e-11,75;UBERON:0010314,5.19e-11,92;UBERON:0001017,6.22e-11,73;UBERON:0000073,4.10e-10,54;UBERON:0001049,3.10e-09,52;UBERON:0005068,3.10e-09,52;UBERON:0006241,3.10e-09,52;UBERON:0007135,3.10e-09,52;UBERON:0003528,6.51e-09,29;UBERON:0002791,6.51e-09,29;UBERON:0001893,6.51e-09,29;UBERON:0002780,7.50e-08,39;UBERON:0001890,7.50e-08,39;UBERON:0006240,7.50e-08,39;UBERON:0003080,1.27e-07,40;UBERON:0004121,1.99e-07,95;UBERON:0000924,1.99e-07,95;UBERON:0006601,1.99e-07,95;UBERON:0002346,6.81e-07,64;UBERON:0003075,6.81e-07,64;UBERON:0007284,6.81e-07,64;UBERON:0002616,7.18e-07,46|phase1_expression=9.12848428497326,3.83872948403297,6.82498859084304,3.0246421130683,3.50627010962443,3.3575854382378,3.03696432774183,1.16210991097419,6.335492496825,3.5109678948299,5.82141091966717,6.62108919661292,1.71200729931206,1.31130603628496,0.999329285446988,2.63217847606774,2.79824751251259,1.57731082679119,1.09691546884591,2.12194825899015,5.52781385981954,5.36171136484781,5.74639536105658,8.95957567643077,6.42345986988076,9.76194338995534,8.61523992318149,6.67960821326256,5.32065574477847,5.04060259519861,6.43018480900384,1.27006134691926,1.23012957516914,0,4.91047753577167,8.97667084935859,7.75843553797003,1.25559489221072,3.906676722619,1.57057123192139,2.35292595212406,1.36609096991689,0,0.629484089877886,1.01376931219515,0.917733760808408,2.34717403304412,4.57852828398938,5.05278220289285,3.30530828426282,2.79972843250725,4.31257693094915,2.01339127269284,2.90144856804538,2.01656279485478,1.80081605225163,2.0057340795713,3.09403255366465,14.3644687210314,13.2247744818008,12.6766280701236,2.71075625655306,2.66788438833342,8.99899717281399,10.8775299882367,9.2362414942993,5.69240209984969,5.37905627450176,8.39885859698669,8.50537411489651,7.78202357000113,23.1377297367081,21.4242484723065,7.22695715368229,7.18841032636773,14.7075005857603,6.60695285996332,7.40586560894089,5.83704826373725,11.0784481693363,11.7104183811084,7.29278718779464,10.3297709630511,7.31591393041184,6.41752640662602,8.83885756421003,15.9456282494995,11.5567656411686,7.04253597998612,6.49915416918356,0.289864488701678,8.60423876981386,8.15965600449301,14.0322829825832,9.74664626171504,5.82434953226536,8.14577636764161,2.21559419351475,6.49465011507172,2.12003744706204,8.73229202615419,5.13305909657271,0,0,2.81438353314578,3.04031838570118,5.56076889516262,7.65031994117702,0.776813650941515,1.48442139064825,5.03107447621794,2.13125834818499,3.68984795609694,2.71300752994721,4.46837087115678,7.53999547978053,0.247194967734374,3.7595832799177,0.884610551949874,2.26473589926373,4.19598885074748,4.84875253135222,1.86391761218122,2.04946557908083,2.72280718857492,3.83185582812887,4.43315960671905,3.59941638596045,5.08280908292259,3.14560342750128,2.74500361691176,13.1937069718508,2.9550134432687,6.13717097592793,5.81806524766768,4.70499662896497,3.1570202793598,1.99051152976149,2.0217820674694,1.47309299120532,3.77349284591841,5.28774840196988,2.88099407688559,2.56198190320716,2.51735046859913,3.71529788826064,4.02917415606834,2.06962696591213,3.44908788692548,3.02569728268511,2.46331573829528,2.19195732427575,1.66828349535359,0.348252166522167,0.61734640922383,1.59227413454795,0.702213187313235,2.05878325691772,3.6941254921427,4.14251545071004,5.62862543954631,5.40186184383045,4.02466050494857,4.72234156193769,8.4846912088058,9.06882384526591,12.8771232671817,11.2094728672483,11.6837493438571,11.984224877774,16.7001747664463,21.7837981263745,17.124908992702,14.2258803885994,3.36463917702604,9.36431972651488,3.63460661282178,2.3800550999719,2.3461707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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:67680
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=1bp_to_ENSMUST00000125780_5end
|cluster_id=chr4:140517319..140517330,+
|description=CAGE_peak_2_at_Sdhb_5end
|id=chr4:140517319..140517330,+
|ontology_enrichment_celltype=CL:0000117!4.36e-12!23;CL:0000337!4.36e-12!23;CL:0000221!5.08e-10!44;CL:0000133!5.08e-10!44;CL:0000540!1.09e-09!33;CL:0000047!1.09e-09!33;CL:0000031!1.09e-09!33;CL:0000404!1.09e-09!33;CL:0002319!1.33e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,4.33e-12,23;CL:0000337,4.33e-12,23;CL:0000221,5.05e-10,44;CL:0000133,5.05e-10,44;CL:0000540,1.08e-09,33;CL:0000047,1.08e-09,33;CL:0000031,1.08e-09,33;CL:0000404,1.08e-09,33;CL:0002319,1.32e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!9.12e-12!34;UBERON:0000073!1.49e-11!75;UBERON:0001016!1.49e-11!75;UBERON:0001017!6.23e-11!73;UBERON:0005743!6.23e-11!73;UBERON:0001049!3.10e-09!52;UBERON:0005068!3.10e-09!52;UBERON:0006241!3.10e-09!52;UBERON:0007135!3.10e-09!52;UBERON:0002791!6.54e-09!29;UBERON:0003528!6.54e-09!29;UBERON:0001893!6.54e-09!29;UBERON:0002780!7.50e-08!39;UBERON:0001890!7.50e-08!39;UBERON:0006240!7.50e-08!39;UBERON:0002616!1.11e-07!49;UBERON:0003080!1.27e-07!40;UBERON:0000955!1.62e-07!50;UBERON:0006238!1.62e-07!50;UBERON:0004121!4.67e-07!102;UBERON:0000924!4.67e-07!102;UBERON:0006601!4.67e-07!102;UBERON:0000033!8.44e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.06e-12,34;UBERON:0001016,1.49e-11,75;UBERON:0010314,5.19e-11,92;UBERON:0001017,6.22e-11,73;UBERON:0000073,4.10e-10,54;UBERON:0001049,3.10e-09,52;UBERON:0005068,3.10e-09,52;UBERON:0006241,3.10e-09,52;UBERON:0007135,3.10e-09,52;UBERON:0003528,6.51e-09,29;UBERON:0002791,6.51e-09,29;UBERON:0001893,6.51e-09,29;UBERON:0002780,7.50e-08,39;UBERON:0001890,7.50e-08,39;UBERON:0006240,7.50e-08,39;UBERON:0003080,1.27e-07,40;UBERON:0004121,1.99e-07,95;UBERON:0000924,1.99e-07,95;UBERON:0006601,1.99e-07,95;UBERON:0002346,6.81e-07,64;UBERON:0003075,6.81e-07,64;UBERON:0007284,6.81e-07,64;UBERON:0002616,7.18e-07,46
|phase1_expression=9.12848428497326,3.83872948403297,6.82498859084304,3.0246421130683,3.50627010962443,3.3575854382378,3.03696432774183,1.16210991097419,6.335492496825,3.5109678948299,5.82141091966717,6.62108919661292,1.71200729931206,1.31130603628496,0.999329285446988,2.63217847606774,2.79824751251259,1.57731082679119,1.09691546884591,2.12194825899015,5.52781385981954,5.36171136484781,5.74639536105658,8.95957567643077,6.42345986988076,9.76194338995534,8.61523992318149,6.67960821326256,5.32065574477847,5.04060259519861,6.43018480900384,1.27006134691926,1.23012957516914,0,4.91047753577167,8.97667084935859,7.75843553797003,1.25559489221072,3.906676722619,1.57057123192139,2.35292595212406,1.36609096991689,0,0.629484089877886,1.01376931219515,0.917733760808408,2.34717403304412,4.57852828398938,5.05278220289285,3.30530828426282,2.79972843250725,4.31257693094915,2.01339127269284,2.90144856804538,2.01656279485478,1.80081605225163,2.0057340795713,3.09403255366465,14.3644687210314,13.2247744818008,12.6766280701236,2.71075625655306,2.66788438833342,8.99899717281399,10.8775299882367,9.2362414942993,5.69240209984969,5.37905627450176,8.39885859698669,8.50537411489651,7.78202357000113,23.1377297367081,21.4242484723065,7.22695715368229,7.18841032636773,14.7075005857603,6.60695285996332,7.40586560894089,5.83704826373725,11.0784481693363,11.7104183811084,7.29278718779464,10.3297709630511,7.31591393041184,6.41752640662602,8.83885756421003,15.9456282494995,11.5567656411686,7.04253597998612,6.49915416918356,0.289864488701678,8.60423876981386,8.15965600449301,14.0322829825832,9.74664626171504,5.82434953226536,8.14577636764161,2.21559419351475,6.49465011507172,2.12003744706204,8.73229202615419,5.13305909657271,0,0,2.81438353314578,3.04031838570118,5.56076889516262,7.65031994117702,0.776813650941515,1.48442139064825,5.03107447621794,2.13125834818499,3.68984795609694,2.71300752994721,4.46837087115678,7.53999547978053,0.247194967734374,3.7595832799177,0.884610551949874,2.26473589926373,4.19598885074748,4.84875253135222,1.86391761218122,2.04946557908083,2.72280718857492,3.83185582812887,4.43315960671905,3.59941638596045,5.08280908292259,3.14560342750128,2.74500361691176,13.1937069718508,2.9550134432687,6.13717097592793,5.81806524766768,4.70499662896497,3.1570202793598,1.99051152976149,2.0217820674694,1.47309299120532,3.77349284591841,5.28774840196988,2.88099407688559,2.56198190320716,2.51735046859913,3.71529788826064,4.02917415606834,2.06962696591213,3.44908788692548,3.02569728268511,2.46331573829528,2.19195732427575,1.66828349535359,0.348252166522167,0.61734640922383,1.59227413454795,0.702213187313235,2.05878325691772,3.6941254921427,4.14251545071004,5.62862543954631,5.40186184383045,4.02466050494857,4.72234156193769,8.4846912088058,9.06882384526591,12.8771232671817,11.2094728672483,11.6837493438571,11.984224877774,16.7001747664463,21.7837981263745,17.124908992702,14.2258803885994,3.36463917702604,9.36431972651488,3.63460661282178,2.3800550999719,2.34617075588757,2.78684006232526,2.57734922644187,1.4117846723634,3.11329261382818,4.56541502670142,6.16887780007865,4.28217282282428,5.7807098024062,2.58643413653496,2.33956904542944,4.49409704327111,7.3486936957396,5.57595565112228,3.03468641524931,3.08470984046268,2.25415471346161,3.86937522906097,3.29719228184964,6.52263124979963,6.38689024954999,11.2183712464498,11.7749045881031,12.4631135561019,7.41131567717872,1.50160595144485,1.96558995113203,2.24862112384854,2.02860121388503,2.41177159752417,1.52775511068852,1.15078454980324,5.83686816390127,1.09824565275233,1.43768206527355,2.97712758134803,2.49630138491648,4.04126204715379,4.84373016509163,8.20153986317724,0.739012760666419,6.06372517665551,2.93336957595647,2.71592137240301,1.64283173801951,0.502518772325447,0,2.14647012643579,1.57635144106191,1.10732344824387,1.59454768657487,1.47476983244164,1.72684981865896,0.867894351489069,13.5712155545345,9.24639662491806,3.93411418415229,0.827810238914197,4.65596710964597,6.91548950893999,1.63934945376675,7.06918596172244,4.10160685241134,2.73307121007647,2.58508077279359,5.01834475700359,4.01037613348309,3.11384183867716,3.23848561339915,3.79932615284705,3.55759000151871,3.21321316421807,0.99358059645788,2.67098405500883,4.39794790254655,0.494910368917606,1.32745138339963,2.18502572539483,3.93020624054176,3.20628635585027,5.02013217897314,2.15204603560749,4.13485269069154,2.18120237686503,2.13898427030833,4.42451461110142,9.48767477174989,7.21948802737308,0.680879211507576,3.96134406868882,4.52755393239641,4.92975180572662,3.19212420556092,3.38900753443934,4.11372551505302,5.17590413494819,3.98941903708308,1.27099242518292,0.882113592219848,1.31909002353184,2.09903754704677,1.62844897306021,2.74556391207214,1.14898629821543,2.91480836629851,4.26478194624172,1.02522528478712,2.27025554759545,1.85194527369712,0.941842285023455,1.36694227721025,2.0590035588587,3.39956859987711,3.35883485576779,1.93479963326193,1.90934123603023,2.68885594543965,2.84647253977588,3.45617090629764,1.67270636811575,3.05707589244649,2.56242258131159,2.56225712748541,3.40282724579238,4.66613903850454,4.97071450469541,5.07323644815771,1.64468200648377,2.97825282822776,1.36115831840833,2.58319646955462,1.01373675294467,2.58185925020659,3.25510962109875,4.19437377702843,2.65742532908607,6.91272015018877,2.21207784439725,5.47358081283443,3.90301637226344,3.76770386635606,2.8644271306797,2.18549490259391,3.00488623799922,5.31682297828478,3.93769154797776,4.34378797933499,3.83139503519994,3.50848370663109,4.52195655709548,2.33753804363138,4.98806843953465,1.77588762699252,1.52513556236109,1.84673078000486,1.15913756419314,2.43987218086537,0.915758121336325,1.07184189539533,0.501572104035363,11.8597886949584,8.74617949363636,12.0308057822273,18.2164373284309,11.6464028361009,6.0431511791176,7.42524750254986,4.05289082901798,5.89085131679466,3.62432218226274,5.50072942196136,2.79317411380722,3.58540572083682,1.21553358534147,2.72497111416377,5.69914876195044,4.4449345560323,2.67845574410562,3.20919209591815,5.30664144703975,3.54871019846336,3.39527414494937,5.99305647807247,4.8018864303652,5.97328877138378,4.76293691283074,4.75125736373908,7.7163688185482,5.35711671044299,5.4463600449727,2.40008476669791,3.19456451086807,4.05341522910446,2.76158191601424,4.51725025993587,5.66917872874233,6.58540702341981,2.36762740294059,4.75314398460516,2.24456908663095,3.32178050747688,5.81176446015824,5.32000356120596,4.80304207676495,1.92906610981141,4.99621155875892,3.97683734357194,2.57845264857958,3.25190164517034,3.30887128679273,4.40548887678801
|short_description=p2@Sdhb
}}

Revision as of 01:58, 5 August 2015

Short description:p2@Sdhb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sdhb_5end
Coexpression cluster:NA
Association with transcript: 1bp_to_ENSMUST00000125780_5end
EntrezGene:67680
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Sdhb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.82
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B95.32
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C314.36
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.40
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.08
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.56
Mouse Schwann, donor1.CNhs12507.11728-123D97.04
Mouse Schwann, donor2.CNhs12573.11746-123F96.50
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.03
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.65
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I37.54
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H13.76
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.08
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F113.19
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C68.48
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G312.88
heart, neonate N00.CNhs11213.639-21E311.21
heart, neonate N03.CNhs11221.1349-25I211.68
heart, neonate N10.CNhs11118.749-24G111.98
heart, neonate N16.CNhs11209.782-15G116.70
heart, neonate N20.CNhs11127.821-26I621.78
heart, neonate N25.CNhs11196.1351-25D317.12
heart, neonate N30.CNhs11202.1390-42D214.23
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G19.36
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E37.35
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G76.52
kidney, neonate N10.CNhs11206.758-6D56.39
kidney, neonate N20.CNhs11113.832-19I111.22
kidney, neonate N25.CNhs11122.1353-25F311.77
kidney, neonate N30.CNhs11203.1385-42H112.46
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G26.06
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A36.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D43.46
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I23.90
thymus, embryo E16.CNhs11002.456-26C53.77
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C75.32
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D34.34
thymus, neonate N10.CNhs11194.748-24E43.83
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G74.52
thymus, neonate N30.CNhs11132.1393-42G22.34
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I85.50
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.97
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.33e-1223
neuroblast (sensu Vertebrata)4.33e-1223
ectodermal cell5.05e-1044
neurectodermal cell5.05e-1044
neuron1.08e-0933
neuronal stem cell1.08e-0933
neuroblast1.08e-0933
electrically signaling cell1.08e-0933
neural cell1.32e-0943
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