FFCP PHASE1:Mm9::chr15:10644334..10644365,-: Difference between revisions
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{{FFCP|EntrezGene=75646|HGNC=|MCL_coexpression_id=243|UniProt=Q9EP71|association_with_transcript=20bp_to_ENSMUST00000169385,NM_001166408,uc007vgn.2,uc007vgo.2_5end|description=CAGE_peak_1_at_Rai14_5end|id=chr15:10644334..10644365,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.60e-09!17;UBERON:0005181!2.60e-09!17;UBERON:0002224!2.60e-09!17;UBERON:0000915!2.60e-09!17;UBERON:0008947!2.60e-09!17;UBERON:0003258!2.60e-09!17;UBERON:0002048!1.61e-08!14;UBERON:0000117!1.61e-08!14;UBERON:0000171!1.61e-08!14;UBERON:0000170!1.61e-08!14;UBERON:0005597!1.61e-08!14;UBERON:0000118!1.61e-08!14;UBERON:0005153!3.99e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.45e-09,17;UBERON:0005181,2.45e-09,17;UBERON:0002224,2.45e-09,17;UBERON:0000915,2.45e-09,17;UBERON:0008947,2.45e-09,17;UBERON:0003258,2.45e-09,17;UBERON:0002048,1.53e-08,14;UBERON:0000117,1.53e-08,14;UBERON:0000171,1.53e-08,14;UBERON:0000170,1.53e-08,14;UBERON:0005597,1.53e-08,14;UBERON:0000118,1.53e-08,14;UBERON:0005157,1.19e-07,20;UBERON:0005153,3.82e-07,17|phase1_expression=1.44133962394315,15.0059425284925,10.9199817453489,6.95667686005709,9.5170188689806,5.54001597309236,5.60670337429262,0,0,0,0,0,0,0,1.66554880907831,1.01237633694913,0,0,0.137114433605739,0,5.95303031057488,0.297872853602656,0,8.95957567643077,5.27641346454491,8.6134794617253,6.46142994238612,5.60225204983311,3.42042155021473,2.26827116783938,3.32595765982957,0,0,0,0.288851619751275,0.498703936075477,0.816677425049476,0.418531630736908,0,0,0,0,0,7.30201544258348,10.1376931219515,26.2471855591205,5.47673941043627,2.61630187656536,0.878744730937887,4.6663175777828,14.278615005787,2.87505128729943,0,0,0,34.7300238648528,14.0401385569991,25.2679325215947,2.22548106945558,0.528990979272033,3.80298842103708,15.5868484751801,15.1180115338894,2.2497492932035,2.96659908770092,2.1314403448383,4.49400165777607,2.68952813725088,12.2353742524004,12.0155285115205,11.9885227970288,1.71390590642282,0.883474163806454,6.36952155917761,8.72193786265951,5.51531271966013,0,1.53224805702225,0.614426133024974,1.58263545276233,1.9212405156506,3.12548022334056,1.11673199600552,2.25105044012672,1.68078072554491,1.76777151284201,1.42371680799103,1.86399445825301,11.2074766133112,13.3005945787943,4.05810284182349,5.16254326188832,2.03991400112325,3.2382191498269,9.09686984426737,5.37632264516803,3.93244376368905,34.0860645156116,24.4198844326697,19.7870161725791,1.54927761754349,70.5795625778748,160.527301015187,71.1066703153331,8.65964164044856,12.1612735428047,9.60496445528088,4.5673551887624,4.14300613835475,6.38301197978747,6.59244241711316,2.13125834818499,4.61230994512117,4.97384713823654,5.40908052824242,3.64433114856059,10.3821886448437,1.59059292611903,2.65383165584962,9.38247729694973,8.39197770149496,7.27312879702833,5.59175283654366,1.17112318804619,1.46612694769419,3.83185582812887,0.718890747035522,0.599902730993408,0.635351135365324,0.299581278809645,1.37250180845588,0.879580464790051,1.04294592115366,1.53429274398198,0.62336413367868,0.648965052271031,4.48093200941392,7.0911973247753,2.0217820674694,3.57751155007006,7.93734702072493,10.1156925950728,10.2635413989049,9.49440352365005,5.98721192531685,4.22775276940004,5.43470002446427,3.3631438196072,10.5628316537093,15.8849107340968,15.3077478022636,12.7133524807993,8.89751197521913,10.7958171621872,10.7006710932131,8.7575077400137,0.702213187313235,1.02939162845886,1.13665399758237,8.90640821902658,3.28336483973535,6.12211008967451,8.04932100989715,4.32881309844288,3.39387648352232,3.48800917125612,2.95100741539581,2.21854150497622,1.48103864922132,2.62667942526552,0.972825714550269,1.46199987425332,1.53685080703735,0.671032093801859,0.630869845692382,2.05809224758569,5.94753809370836,1.58670339998127,10.6644125267617,7.19933682767359,5.54130083685001,3.83198696784351,3.55804870151792,3.61428689613862,4.74529061544512,3.29397909448022,2.76468729680296,3.58121649674071,3.50935356814416,1.79763881730844,6.91641759599022,5.17767310461355,9.48339504765408,12.9100819248994,12.3978509240388,9.77526373657508,15.3222464862424,12.554311760367,12.5840708877272,7.38050739898011,6.43694784149637,5.92306386824642,5.03969466048153,2.50267658574141,1.37591296579242,1.12431056192427,2.43432145666204,1.4470629585145,3.8193877767213,4.31544206176216,3.56697498905078,6.31491250332587,8.62609239164127,9.30352369171258,4.05648975048929,7.32478746046624,6.81710171383266,3.37710464954357,14.7802552133284,8.14813070613084,12.87423313892,12.2216461758135,17.3670783733492,27.9735449927832,22.6141458841713,32.977586487968,16.3940549870439,16.3883870340093,11.9591076493115,12.9452018625433,12.4333186943445,15.4774492682217,1.50791283939272,3.26343410291226,10.3270497333998,1.65562047782839,0.642202359951168,0.703270119553219,4.91804836130026,2.01976741763498,7.57219726599016,8.58965237452605,9.69405289797595,19.5954414321093,15.81870585985,15.5692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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:75646 | |||
|HGNC= | |||
|MCL_coexpression_id=243 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9EP71 | |||
|association_with_transcript=20bp_to_ENSMUST00000169385,NM_001166408,uc007vgn.2,uc007vgo.2_5end | |||
|cluster_id=chr15:10644334..10644365,- | |||
|description=CAGE_peak_1_at_Rai14_5end | |||
|id=chr15:10644334..10644365,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.60e-09!17;UBERON:0005181!2.60e-09!17;UBERON:0002224!2.60e-09!17;UBERON:0000915!2.60e-09!17;UBERON:0008947!2.60e-09!17;UBERON:0003258!2.60e-09!17;UBERON:0002048!1.61e-08!14;UBERON:0000117!1.61e-08!14;UBERON:0000171!1.61e-08!14;UBERON:0000170!1.61e-08!14;UBERON:0005597!1.61e-08!14;UBERON:0000118!1.61e-08!14;UBERON:0005153!3.99e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.45e-09,17;UBERON:0005181,2.45e-09,17;UBERON:0002224,2.45e-09,17;UBERON:0000915,2.45e-09,17;UBERON:0008947,2.45e-09,17;UBERON:0003258,2.45e-09,17;UBERON:0002048,1.53e-08,14;UBERON:0000117,1.53e-08,14;UBERON:0000171,1.53e-08,14;UBERON:0000170,1.53e-08,14;UBERON:0005597,1.53e-08,14;UBERON:0000118,1.53e-08,14;UBERON:0005157,1.19e-07,20;UBERON:0005153,3.82e-07,17 | |||
|phase1_expression=1.44133962394315,15.0059425284925,10.9199817453489,6.95667686005709,9.5170188689806,5.54001597309236,5.60670337429262,0,0,0,0,0,0,0,1.66554880907831,1.01237633694913,0,0,0.137114433605739,0,5.95303031057488,0.297872853602656,0,8.95957567643077,5.27641346454491,8.6134794617253,6.46142994238612,5.60225204983311,3.42042155021473,2.26827116783938,3.32595765982957,0,0,0,0.288851619751275,0.498703936075477,0.816677425049476,0.418531630736908,0,0,0,0,0,7.30201544258348,10.1376931219515,26.2471855591205,5.47673941043627,2.61630187656536,0.878744730937887,4.6663175777828,14.278615005787,2.87505128729943,0,0,0,34.7300238648528,14.0401385569991,25.2679325215947,2.22548106945558,0.528990979272033,3.80298842103708,15.5868484751801,15.1180115338894,2.2497492932035,2.96659908770092,2.1314403448383,4.49400165777607,2.68952813725088,12.2353742524004,12.0155285115205,11.9885227970288,1.71390590642282,0.883474163806454,6.36952155917761,8.72193786265951,5.51531271966013,0,1.53224805702225,0.614426133024974,1.58263545276233,1.9212405156506,3.12548022334056,1.11673199600552,2.25105044012672,1.68078072554491,1.76777151284201,1.42371680799103,1.86399445825301,11.2074766133112,13.3005945787943,4.05810284182349,5.16254326188832,2.03991400112325,3.2382191498269,9.09686984426737,5.37632264516803,3.93244376368905,34.0860645156116,24.4198844326697,19.7870161725791,1.54927761754349,70.5795625778748,160.527301015187,71.1066703153331,8.65964164044856,12.1612735428047,9.60496445528088,4.5673551887624,4.14300613835475,6.38301197978747,6.59244241711316,2.13125834818499,4.61230994512117,4.97384713823654,5.40908052824242,3.64433114856059,10.3821886448437,1.59059292611903,2.65383165584962,9.38247729694973,8.39197770149496,7.27312879702833,5.59175283654366,1.17112318804619,1.46612694769419,3.83185582812887,0.718890747035522,0.599902730993408,0.635351135365324,0.299581278809645,1.37250180845588,0.879580464790051,1.04294592115366,1.53429274398198,0.62336413367868,0.648965052271031,4.48093200941392,7.0911973247753,2.0217820674694,3.57751155007006,7.93734702072493,10.1156925950728,10.2635413989049,9.49440352365005,5.98721192531685,4.22775276940004,5.43470002446427,3.3631438196072,10.5628316537093,15.8849107340968,15.3077478022636,12.7133524807993,8.89751197521913,10.7958171621872,10.7006710932131,8.7575077400137,0.702213187313235,1.02939162845886,1.13665399758237,8.90640821902658,3.28336483973535,6.12211008967451,8.04932100989715,4.32881309844288,3.39387648352232,3.48800917125612,2.95100741539581,2.21854150497622,1.48103864922132,2.62667942526552,0.972825714550269,1.46199987425332,1.53685080703735,0.671032093801859,0.630869845692382,2.05809224758569,5.94753809370836,1.58670339998127,10.6644125267617,7.19933682767359,5.54130083685001,3.83198696784351,3.55804870151792,3.61428689613862,4.74529061544512,3.29397909448022,2.76468729680296,3.58121649674071,3.50935356814416,1.79763881730844,6.91641759599022,5.17767310461355,9.48339504765408,12.9100819248994,12.3978509240388,9.77526373657508,15.3222464862424,12.554311760367,12.5840708877272,7.38050739898011,6.43694784149637,5.92306386824642,5.03969466048153,2.50267658574141,1.37591296579242,1.12431056192427,2.43432145666204,1.4470629585145,3.8193877767213,4.31544206176216,3.56697498905078,6.31491250332587,8.62609239164127,9.30352369171258,4.05648975048929,7.32478746046624,6.81710171383266,3.37710464954357,14.7802552133284,8.14813070613084,12.87423313892,12.2216461758135,17.3670783733492,27.9735449927832,22.6141458841713,32.977586487968,16.3940549870439,16.3883870340093,11.9591076493115,12.9452018625433,12.4333186943445,15.4774492682217,1.50791283939272,3.26343410291226,10.3270497333998,1.65562047782839,0.642202359951168,0.703270119553219,4.91804836130026,2.01976741763498,7.57219726599016,8.58965237452605,9.69405289797595,19.5954414321093,15.81870585985,15.5692091933858,14.9779959619711,13.7360253218317,12.6492088942888,4.4984984299053,7.66476460124651,4.09550888434687,5.53815661802159,4.61916344323099,0,2.91336763385978,3.32555912661226,5.28094223316515,2.06711325016541,8.30074899448604,5.42699415653264,4.72593848320757,4.27796854061666,2.21225730555071,3.16255825724996,1.03135543248187,1.36175842301515,5.04171063287669,4.2688365648309,3.85806663056866,6.0295679438373,8.02659679209317,5.26556865926787,2.43571959291679,16.8963629805871,10.8034356140548,2.64634077665954,14.1802177529673,4.03661066739764,7.78036731573211,9.07229814423837,13.1312719796049,3.49777003955821,0.370850604021019,3.75915937755276,5.98521917093345,7.77817014952789,3.01389531207506,3.55404992074665,3.20289442489132,1.5298058699447,1.53946597556024,1.38199973804424,4.77335309007557,7.90839983952838,6.50622294805916,3.99619761040665,4.80903080833278,3.49380101993884,7.1478103583955,5.2898211664215,3.92633912976044,4.40690909192096,4.97071450469541,4.50954350947352,14.054555328134,8.76929999422617,10.5003641705786,7.8787492321416,11.3200604078821,10.5621514781179,7.16124116641726,5.34782656571125,4.59009829569411,4.8965101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| |||
|short_description=p1@Rai14 | |||
}} |
Revision as of 02:07, 5 August 2015
Short description: | p1@Rai14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rai14_5end |
Coexpression cluster: | MCL_coexpression_mm9:243 |
Association with transcript: | 20bp_to_ENSMUST00000169385, NM_001166408, uc007vgn.2, uc007vgo.2_5end |
EntrezGene: | 75646 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 2.45e-09 | 17 |
thoracic segment organ | 2.45e-09 | 17 |
thoracic cavity | 2.45e-09 | 17 |
thoracic segment of trunk | 2.45e-09 | 17 |
respiratory primordium | 2.45e-09 | 17 |
endoderm of foregut | 2.45e-09 | 17 |
lung | 1.53e-08 | 14 |
respiratory tube | 1.53e-08 | 14 |
respiration organ | 1.53e-08 | 14 |
pair of lungs | 1.53e-08 | 14 |
lung primordium | 1.53e-08 | 14 |
lung bud | 1.53e-08 | 14 |
epithelial fold | 1.19e-07 | 20 |
epithelial bud | 3.82e-07 | 17 |