FFCP PHASE1:Mm9::chr10:98724503..98724525,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=66|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:98724503..98724525,+|id=chr10:98724503..98724525,+|ontology_enrichment_celltype=CL:0000063!9.65e-12!66;CL:0002320!5.35e-09!46;CL:0000134!5.35e-09!46;CL:0000988!9.87e-08!32;CL:0002032!9.87e-08!32;CL:0000037!9.87e-08!32;CL:0000566!9.87e-08!32;CL:0000837!9.87e-08!32;CL:0000144!3.20e-07!121;CL:0000012!3.20e-07!121;CL:0000034!4.42e-07!97|ontology_enrichment_celltype_v019_2=CL:0000034,1.57e-14,97;CL:0000107,5.67e-13,9;CL:0000723,2.13e-12,91;CL:0000048,2.13e-12,91;CL:0000988,2.65e-10,32;CL:0002032,2.65e-10,32;CL:0000037,2.65e-10,32;CL:0000837,2.65e-10,32;CL:0000791,7.52e-09,9;CL:0000789,7.52e-09,9;CL:0002420,7.52e-09,9;CL:0002419,7.52e-09,9;CL:0000790,7.52e-09,9;CL:0002320,5.56e-08,46;CL:0000134,5.56e-08,46;CL:0000624,7.77e-08,8;CL:0002031,2.37e-07,25;CL:0000084,5.05e-07,11;CL:0000827,5.05e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,3.28e-08,6;DOID:0060100,5.68e-07,3;DOID:4045,5.68e-07,3|ontology_enrichment_uberon=UBERON:0002384!5.35e-09!46|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.67e-13,9;UBERON:0000010,2.70e-10,11;UBERON:0002384,5.56e-08,46|phase1_expression=0.160148847104794,3.14077866875425,0.909998478779072,3.62957053568196,3.00537437967808,0.16787927191189,0.700837921786577,2.58246646883153,2.39340827657833,2.80877431586392,0.68487187290202,0.8774937489487,2.05440875917447,1.92324885321794,0.333109761815663,0,0,1.10411757875383,0.411343300817216,1.69755860719212,0.255129870453209,0.397163804803541,0.261199789138935,0.159992422793407,1.14704640533585,2.29692785646008,0.86152399231815,0.430942465371778,0.950117097281869,0.504060259519861,0.665191531965914,4.44521471421742,1.23012957516914,0,1.1554064790051,0.498703936075477,0.612508068787107,5.85944283031671,3.906676722619,6.28228492768558,8.2352408324342,4.78131839470912,8.25367600152961,1.00717454380462,0.811015449756117,1.10128051297009,0,0,0,0,0.139986421625363,0,0.838913030288682,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,0.599200221036809,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0.151452386666368,0.151143120213571,4.92769630792852,0.860423876981386,0,0.539703191637817,0,0.448026887097336,0.421333260395256,0.852151612890289,1.03914401841148,0.70667914902068,0.704217098883403,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.22836775943812,0.258937883647172,0.593768556259299,0.173485326766136,0,0.691846491768175,0.904335843315735,0,0.502666365318702,0.494389935468748,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0,0,0.510914110417183,2.99537811264801,4.19931911695385,2.28726408731516,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0.41557608911912,0,0.101839363850316,0.622034853050465,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.2562274405697,0.281105173679186,0.258703370739016,0.862271971731369,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0.411564272815887,0,0.702213187313235,1.80143534980301,0.568326998791185,0,0,0.540186184383045,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.32833492815819,0.405344047729279,0.438599962275997,0,0.268412837520744,0.210289948564127,0.102904612379284,0.330418782983798,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.407302655690628,0.775809948670503,0.210407459670956,0.189709611372772,0.147610147979602,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0.763877555344259,0,0,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.554259570499814,0.37898282354097,0.325929952884052,0.169745085775188,0.704070744865506,0.502518772325447,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0.637819074629948,1.63863314715738,1.20879487306127,0.867894351489069,0,1.08781136763742,0,0,0,0.35163505977661,0,0.252470927204373,1.89304931649754,1.17131623288992,1.29254038639679,1.43381278771531,1.11399337041197,1.13230612315533,1.61924280669958,1.16902343164525,1.18586333383957,0,0.141940085208269,0,0,0,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0,0,0.363533729477506,0,0,1.05418608574999,0,0,0.540183282093931,0.517434735131018,0,0,0,0.329098041204242,0.913394847343798,0,0,0,0.32977250588296,0.161464426695906,0.361877549568935,0.119372344003136,0.328281799490123,0.291480836629851,0,0.341741761595705,0.206386867963223,0.555583582109135,0.188368457004691,0.546776910884101,0.457556346413045,3.39956859987711,4.75834937900437,2.9021994498929,0,1.42351197111511,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.651021924219751,0.104859344425711,0.241584120826006,0.288030006257865,1.58005560314089,0,0,0.129920822977795,0.179026695667481,0.596044064343795,0,0.443068581523732,1.21159739937777,0.381034033274999,1.20991422164209,0.779663045918019,1.34696578296461,0.935015217452552,0.226730383615211,0,0.62799699626633,0.167884616364078,0,0.187682475451182,0.73260649706906,0.214368379079066,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,0,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0,0,0.192075457214608,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0,0.365855945745545,0,0,1.12228454331548,0,0,0,0,0.771626443924566,0,0,0,0.191288332068843,0.441182838239031,0.463735671240843|short_description=p@chr10:98724503..98724525,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:98724503..98724525,+ | |||
|description=CAGE_peak_at_chr10:98724503..98724525,+ | |||
|id=chr10:98724503..98724525,+ | |||
|ontology_enrichment_celltype=CL:0000063!9.65e-12!66;CL:0002320!5.35e-09!46;CL:0000134!5.35e-09!46;CL:0000988!9.87e-08!32;CL:0002032!9.87e-08!32;CL:0000037!9.87e-08!32;CL:0000566!9.87e-08!32;CL:0000837!9.87e-08!32;CL:0000144!3.20e-07!121;CL:0000012!3.20e-07!121;CL:0000034!4.42e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.57e-14,97;CL:0000107,5.67e-13,9;CL:0000723,2.13e-12,91;CL:0000048,2.13e-12,91;CL:0000988,2.65e-10,32;CL:0002032,2.65e-10,32;CL:0000037,2.65e-10,32;CL:0000837,2.65e-10,32;CL:0000791,7.52e-09,9;CL:0000789,7.52e-09,9;CL:0002420,7.52e-09,9;CL:0002419,7.52e-09,9;CL:0000790,7.52e-09,9;CL:0002320,5.56e-08,46;CL:0000134,5.56e-08,46;CL:0000624,7.77e-08,8;CL:0002031,2.37e-07,25;CL:0000084,5.05e-07,11;CL:0000827,5.05e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.28e-08,6;DOID:0060100,5.68e-07,3;DOID:4045,5.68e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.35e-09!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.67e-13,9;UBERON:0000010,2.70e-10,11;UBERON:0002384,5.56e-08,46 | |||
|phase1_expression=0.160148847104794,3.14077866875425,0.909998478779072,3.62957053568196,3.00537437967808,0.16787927191189,0.700837921786577,2.58246646883153,2.39340827657833,2.80877431586392,0.68487187290202,0.8774937489487,2.05440875917447,1.92324885321794,0.333109761815663,0,0,1.10411757875383,0.411343300817216,1.69755860719212,0.255129870453209,0.397163804803541,0.261199789138935,0.159992422793407,1.14704640533585,2.29692785646008,0.86152399231815,0.430942465371778,0.950117097281869,0.504060259519861,0.665191531965914,4.44521471421742,1.23012957516914,0,1.1554064790051,0.498703936075477,0.612508068787107,5.85944283031671,3.906676722619,6.28228492768558,8.2352408324342,4.78131839470912,8.25367600152961,1.00717454380462,0.811015449756117,1.10128051297009,0,0,0,0,0.139986421625363,0,0.838913030288682,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,0.599200221036809,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0.151452386666368,0.151143120213571,4.92769630792852,0.860423876981386,0,0.539703191637817,0,0.448026887097336,0.421333260395256,0.852151612890289,1.03914401841148,0.70667914902068,0.704217098883403,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.22836775943812,0.258937883647172,0.593768556259299,0.173485326766136,0,0.691846491768175,0.904335843315735,0,0.502666365318702,0.494389935468748,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0,0,0.510914110417183,2.99537811264801,4.19931911695385,2.28726408731516,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0.41557608911912,0,0.101839363850316,0.622034853050465,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.2562274405697,0.281105173679186,0.258703370739016,0.862271971731369,0,0.175951124163949,0.43839146485515,0.278047249225598,0,0.411564272815887,0,0.702213187313235,1.80143534980301,0.568326998791185,0,0,0.540186184383045,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.32833492815819,0.405344047729279,0.438599962275997,0,0.268412837520744,0.210289948564127,0.102904612379284,0.330418782983798,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.407302655690628,0.775809948670503,0.210407459670956,0.189709611372772,0.147610147979602,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0.763877555344259,0,0,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0.554259570499814,0.37898282354097,0.325929952884052,0.169745085775188,0.704070744865506,0.502518772325447,0.476087281772027,0.195133647857799,0.157635144106191,0.44292937929755,0.637819074629948,1.63863314715738,1.20879487306127,0.867894351489069,0,1.08781136763742,0,0,0,0.35163505977661,0,0.252470927204373,1.89304931649754,1.17131623288992,1.29254038639679,1.43381278771531,1.11399337041197,1.13230612315533,1.61924280669958,1.16902343164525,1.18586333383957,0,0.141940085208269,0,0,0,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0,0,0.363533729477506,0,0,1.05418608574999,0,0,0.540183282093931,0.517434735131018,0,0,0,0.329098041204242,0.913394847343798,0,0,0,0.32977250588296,0.161464426695906,0.361877549568935,0.119372344003136,0.328281799490123,0.291480836629851,0,0.341741761595705,0.206386867963223,0.555583582109135,0.188368457004691,0.546776910884101,0.457556346413045,3.39956859987711,4.75834937900437,2.9021994498929,0,1.42351197111511,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.651021924219751,0.104859344425711,0.241584120826006,0.288030006257865,1.58005560314089,0,0,0.129920822977795,0.179026695667481,0.596044064343795,0,0.443068581523732,1.21159739937777,0.381034033274999,1.20991422164209,0.779663045918019,1.34696578296461,0.935015217452552,0.226730383615211,0,0.62799699626633,0.167884616364078,0,0.187682475451182,0.73260649706906,0.214368379079066,0.501572104035363,0.564751842617067,0.920650473014354,0.572895513439397,0,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0,0,0.192075457214608,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0,0.365855945745545,0,0,1.12228454331548,0,0,0,0,0.771626443924566,0,0,0,0.191288332068843,0.441182838239031,0.463735671240843 | |||
|short_description=p@chr10:98724503..98724525,+ | |||
}} |
Latest revision as of 02:39, 5 August 2015
Short description: | p@chr10:98724503..98724525, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:98724503..98724525, + |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.57e-14 | 97 |
autonomic neuron | 5.67e-13 | 9 |
somatic stem cell | 2.13e-12 | 91 |
multi fate stem cell | 2.13e-12 | 91 |
hematopoietic cell | 2.65e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.65e-10 | 32 |
hematopoietic stem cell | 2.65e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.65e-10 | 32 |
mature alpha-beta T cell | 7.52e-09 | 9 |
alpha-beta T cell | 7.52e-09 | 9 |
immature T cell | 7.52e-09 | 9 |
mature T cell | 7.52e-09 | 9 |
immature alpha-beta T cell | 7.52e-09 | 9 |
connective tissue cell | 5.56e-08 | 46 |
mesenchymal cell | 5.56e-08 | 46 |
CD4-positive, alpha-beta T cell | 7.77e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 2.37e-07 | 25 |
T cell | 5.05e-07 | 11 |
pro-T cell | 5.05e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.67e-13 | 9 |
peripheral nervous system | 2.70e-10 | 11 |
connective tissue | 5.56e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.28e-08 | 6 |
musculoskeletal system cancer | 5.68e-07 | 3 |
muscle cancer | 5.68e-07 | 3 |