FFCP PHASE1:Mm9::chr1:165244244..165244254,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18933|HGNC=|MCL_coexpression_id=681|UniProt=P63013|association_with_transcript=-403bp_to_ENSMUST00000027878_5end|description=CAGE_peak_8_at_Prrx1_5end|id=chr1:165244244..165244254,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,3.99e-17,3;CL:0000359,3.99e-17,3;CL:0002539,3.99e-17,3;CL:0000514,3.99e-17,3;CL:0000680,7.98e-09,6;CL:0000187,7.98e-09,6;CL:0000056,7.98e-09,6;CL:0000222,1.25e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000474!2.00e-07!9;UBERON:0003102!2.47e-07!23;UBERON:0002102!3.64e-07!8;UBERON:0004710!3.64e-07!8;UBERON:0005419!3.64e-07!8;UBERON:0005417!3.64e-07!8;UBERON:0005729!3.64e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002102,5.23e-27,7;UBERON:0004710,5.23e-27,7;UBERON:0005419,5.23e-27,7;UBERON:0005417,5.23e-27,7;UBERON:0005729,5.23e-27,7;UBERON:0010708,1.35e-23,8;UBERON:0001135,3.99e-17,3;UBERON:0004237,3.99e-17,3;UBERON:0004695,3.99e-17,3;UBERON:0002111,3.99e-17,3;UBERON:0004178,3.99e-17,3;UBERON:0000026,1.27e-15,12;UBERON:0004708,1.27e-15,12;UBERON:0002101,1.27e-15,12;UBERON:0004357,1.27e-15,12;UBERON:0004347,1.27e-15,12;UBERON:0005732,1.27e-15,12;UBERON:0005733,1.27e-15,12;UBERON:0003102,2.03e-14,22;UBERON:0010707,2.16e-14,13;UBERON:0000947,5.50e-13,4;UBERON:0001637,5.50e-13,4;UBERON:0004573,5.50e-13,4;UBERON:0003509,5.50e-13,4;UBERON:0004571,5.50e-13,4;UBERON:0010191,5.50e-13,4;UBERON:0004572,5.50e-13,4;UBERON:0000055,1.71e-10,5;UBERON:0007500,1.71e-10,5;UBERON:0001981,1.71e-10,5;UBERON:0002049,1.71e-10,5;UBERON:0007798,1.71e-10,5;UBERON:0004537,1.71e-10,5;UBERON:0006965,1.71e-10,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,3.04130793658544,4.58866880404204,1.56478268869608,0,0,0,0.55994568650145,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,1.1930122580464,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.433798070759735,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0,0,0.390361328888111,0,0.180062129805349,0,0.204109497453984,0.2562274405697,0.0937017245597288,0,1.94011193639558,2.64748512234947,4.57472922826267,1.31517439456545,3.05851974148158,0.696504333044333,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,3.27869890753351,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.977321756121456,0.494910368917606,0,0,0,0,0.295301892880773,0,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.469343416127421,0.21183207086382,0.220528398054962,0.65954501176592,1.13025098687134,0.904693873922338,0.477489376012546,0,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0,0,0,0,0,0,0,0,0.388902376688095,0,0,0.469428954583016,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,1.12609485270709,0.73260649706906,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.682934423016537,0.729320151204882,0,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0,0.50695859978048,0.754505365544305,0.0936415074698824,0.448176066834085,0.516919220600519,0,0.115884325944855,0,0.412085900803307,0.588795680537589,0.342869252385415,1.06485483695602,0.238436189947321,0.290692833264657,0.470546902076653,0.25384382367503,0.365855945745545,0.789209134313529,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0.771626443924566,0.249810577937946,0.935726433781634,0.214871054048298,1.14772999241306,0.220591419119515,0|short_description=p8@Prrx1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18933 | |||
|HGNC= | |||
|MCL_coexpression_id=681 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63013 | |||
|association_with_transcript=-403bp_to_ENSMUST00000027878_5end | |||
|cluster_id=chr1:165244244..165244254,- | |||
|description=CAGE_peak_8_at_Prrx1_5end | |||
|id=chr1:165244244..165244254,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.99e-17,3;CL:0000359,3.99e-17,3;CL:0002539,3.99e-17,3;CL:0000514,3.99e-17,3;CL:0000680,7.98e-09,6;CL:0000187,7.98e-09,6;CL:0000056,7.98e-09,6;CL:0000222,1.25e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!2.00e-07!9;UBERON:0003102!2.47e-07!23;UBERON:0002102!3.64e-07!8;UBERON:0004710!3.64e-07!8;UBERON:0005419!3.64e-07!8;UBERON:0005417!3.64e-07!8;UBERON:0005729!3.64e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,5.23e-27,7;UBERON:0004710,5.23e-27,7;UBERON:0005419,5.23e-27,7;UBERON:0005417,5.23e-27,7;UBERON:0005729,5.23e-27,7;UBERON:0010708,1.35e-23,8;UBERON:0001135,3.99e-17,3;UBERON:0004237,3.99e-17,3;UBERON:0004695,3.99e-17,3;UBERON:0002111,3.99e-17,3;UBERON:0004178,3.99e-17,3;UBERON:0000026,1.27e-15,12;UBERON:0004708,1.27e-15,12;UBERON:0002101,1.27e-15,12;UBERON:0004357,1.27e-15,12;UBERON:0004347,1.27e-15,12;UBERON:0005732,1.27e-15,12;UBERON:0005733,1.27e-15,12;UBERON:0003102,2.03e-14,22;UBERON:0010707,2.16e-14,13;UBERON:0000947,5.50e-13,4;UBERON:0001637,5.50e-13,4;UBERON:0004573,5.50e-13,4;UBERON:0003509,5.50e-13,4;UBERON:0004571,5.50e-13,4;UBERON:0010191,5.50e-13,4;UBERON:0004572,5.50e-13,4;UBERON:0000055,1.71e-10,5;UBERON:0007500,1.71e-10,5;UBERON:0001981,1.71e-10,5;UBERON:0002049,1.71e-10,5;UBERON:0007798,1.71e-10,5;UBERON:0004537,1.71e-10,5;UBERON:0006965,1.71e-10,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,3.04130793658544,4.58866880404204,1.56478268869608,0,0,0,0.55994568650145,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,1.1930122580464,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.433798070759735,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0,0,0.390361328888111,0,0.180062129805349,0,0.204109497453984,0.2562274405697,0.0937017245597288,0,1.94011193639558,2.64748512234947,4.57472922826267,1.31517439456545,3.05851974148158,0.696504333044333,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,3.27869890753351,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.178065603667255,0.977321756121456,0.494910368917606,0,0,0,0,0.295301892880773,0,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.469343416127421,0.21183207086382,0.220528398054962,0.65954501176592,1.13025098687134,0.904693873922338,0.477489376012546,0,0,0,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0,0,0,0,0,0,0,0,0.388902376688095,0,0,0.469428954583016,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,1.12609485270709,0.73260649706906,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.682934423016537,0.729320151204882,0,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0,0.50695859978048,0.754505365544305,0.0936415074698824,0.448176066834085,0.516919220600519,0,0.115884325944855,0,0.412085900803307,0.588795680537589,0.342869252385415,1.06485483695602,0.238436189947321,0.290692833264657,0.470546902076653,0.25384382367503,0.365855945745545,0.789209134313529,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0.771626443924566,0.249810577937946,0.935726433781634,0.214871054048298,1.14772999241306,0.220591419119515,0 | |||
|short_description=p8@Prrx1 | |||
}} |
Revision as of 03:32, 5 August 2015
Short description: | p8@Prrx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Prrx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:681 |
Association with transcript: | -403bp_to_ENSMUST00000027878_5end |
EntrezGene: | 18933 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.99e-17 | 3 |
vascular associated smooth muscle cell | 3.99e-17 | 3 |
aortic smooth muscle cell | 3.99e-17 | 3 |
smooth muscle myoblast | 3.99e-17 | 3 |
muscle precursor cell | 7.98e-09 | 6 |
muscle cell | 7.98e-09 | 6 |
myoblast | 7.98e-09 | 6 |
mesodermal cell | 1.25e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
forelimb | 5.23e-27 | 7 |
pectoral appendage | 5.23e-27 | 7 |
pectoral appendage bud | 5.23e-27 | 7 |
forelimb bud | 5.23e-27 | 7 |
forelimb/pectoral fin field | 5.23e-27 | 7 |
pectoral complex | 1.35e-23 | 8 |
smooth muscle tissue | 3.99e-17 | 3 |
blood vessel smooth muscle | 3.99e-17 | 3 |
arterial system smooth muscle | 3.99e-17 | 3 |
artery smooth muscle tissue | 3.99e-17 | 3 |
aorta smooth muscle tissue | 3.99e-17 | 3 |
appendage | 1.27e-15 | 12 |
paired limb/fin | 1.27e-15 | 12 |
limb | 1.27e-15 | 12 |
paired limb/fin bud | 1.27e-15 | 12 |
limb bud | 1.27e-15 | 12 |
limb/fin field | 1.27e-15 | 12 |
limb field | 1.27e-15 | 12 |
surface structure | 2.03e-14 | 22 |
appendage girdle complex | 2.16e-14 | 13 |
aorta | 5.50e-13 | 4 |
artery | 5.50e-13 | 4 |
systemic artery | 5.50e-13 | 4 |
arterial blood vessel | 5.50e-13 | 4 |
systemic arterial system | 5.50e-13 | 4 |
aortic system | 5.50e-13 | 4 |
arterial system | 5.50e-13 | 4 |
vessel | 1.71e-10 | 5 |
epithelial tube open at both ends | 1.71e-10 | 5 |
blood vessel | 1.71e-10 | 5 |
vasculature | 1.71e-10 | 5 |
vascular system | 1.71e-10 | 5 |
blood vasculature | 1.71e-10 | 5 |
vascular cord | 1.71e-10 | 5 |