FFCP PHASE1:Mm9::chr7:38558574..38558611,-: Difference between revisions
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{{FFCP|EntrezGene=243937|HGNC=|UniProt=|association_with_transcript=0bp_to_uc009gko.1_5end|description=CAGE_peak_2_at_Zfp536_5end|id=chr7:38558574..38558611,-|ontology_enrichment_celltype=CL:0000540!1.84e-18!33;CL:0000047!1.84e-18!33;CL:0000031!1.84e-18!33;CL:0000404!1.84e-18!33;CL:0000221!2.71e-15!44;CL:0000133!2.71e-15!44;CL:0002319!4.05e-15!43;CL:0000393!2.32e-13!39;CL:0000211!2.32e-13!39;CL:0000117!1.29e-11!23;CL:0000337!1.29e-11!23;CL:0000055!8.62e-11!50;CL:0000107!1.21e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,4.57e-25,33;CL:0000047,4.57e-25,33;CL:0000031,4.57e-25,33;CL:0000404,4.57e-25,33;CL:0002319,5.73e-21,43;CL:0000221,3.39e-20,44;CL:0000133,3.39e-20,44;CL:0000393,2.42e-19,39;CL:0000211,2.42e-19,39;CL:0000117,3.21e-15,23;CL:0000337,3.21e-15,23;CL:0000107,2.22e-10,9;CL:0002321,2.65e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.45e-26!75;UBERON:0001016!5.45e-26!75;UBERON:0004121!9.02e-26!102;UBERON:0000924!9.02e-26!102;UBERON:0006601!9.02e-26!102;UBERON:0001017!1.75e-24!73;UBERON:0005743!1.75e-24!73;UBERON:0002346!6.36e-19!71;UBERON:0003075!6.36e-19!71;UBERON:0007284!6.36e-19!71;UBERON:0000033!6.43e-17!63;UBERON:0001049!5.51e-14!52;UBERON:0005068!5.51e-14!52;UBERON:0006241!5.51e-14!52;UBERON:0007135!5.51e-14!52;UBERON:0003056!1.54e-13!49;UBERON:0000955!4.38e-13!50;UBERON:0006238!4.38e-13!50;UBERON:0002616!1.35e-12!49;UBERON:0003080!6.62e-10!40;UBERON:0002780!2.12e-09!39;UBERON:0001890!2.12e-09!39;UBERON:0006240!2.12e-09!39;UBERON:0000010!5.17e-09!11;UBERON:0002020!3.90e-08!34;UBERON:0002410!1.21e-07!9;UBERON:0000153!9.61e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.56e-31,75;UBERON:0004121,3.72e-30,95;UBERON:0000924,3.72e-30,95;UBERON:0006601,3.72e-30,95;UBERON:0001017,5.14e-29,73;UBERON:0002346,2.68e-23,64;UBERON:0003075,2.68e-23,64;UBERON:0007284,2.68e-23,64;UBERON:0010371,1.55e-19,73;UBERON:0010314,1.99e-17,92;UBERON:0000073,3.72e-17,54;UBERON:0001049,1.40e-15,52;UBERON:0005068,1.40e-15,52;UBERON:0006241,1.40e-15,52;UBERON:0007135,1.40e-15,52;UBERON:0003056,5.43e-14,49;UBERON:0000010,2.34e-12,11;UBERON:0000955,2.57e-12,47;UBERON:0006238,2.57e-12,47;UBERON:0002616,1.08e-11,46;UBERON:0002410,2.22e-10,9;UBERON:0003080,1.57e-09,40;UBERON:0002780,6.79e-09,39;UBERON:0001890,6.79e-09,39;UBERON:0006240,6.79e-09,39;UBERON:0002020,7.19e-09,34;UBERON:0003076,1.38e-07,12;UBERON:0003057,1.38e-07,12|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0,3.64169629547276,5.28990979272033,3.80298842103708,0,0.889294796111139,0,0,0,0.599200221036809,0,1.03689612308478,1.08004750665353,0.630974884054146,3.14216082844184,1.98781686856452,1.22490799214954,1.82106394934649,1.83843757322004,4.40463523997555,2.17068474744819,3.07213066512487,2.2420668914133,2.01272815925301,1.56274011167028,6.97957497503452,5.06486349028512,3.97275444219706,4.41942878210502,2.56269025438385,2.60959224155421,6.20954785332109,5.36558076758177,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.45673551887624,0,0.742210695324124,1.04091196059682,0,0.230615497256059,0.452167921657868,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,19.9090941967852,18.2218634927706,0,0,0,0,3.2953940669061,2.74500361691176,0.376963056338593,2.08589184230732,2.04572365864264,2.90903262383384,2.92034273521964,0,0,0.252722758433675,2.94618598241064,1.17108398666433,0.229902104433473,1.0803727788321,1.65775299619287,4.08218994907967,6.14945857367279,6.93392761741993,15.2634988736019,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,1.39023624612799,1.0447564995665,2.05782136407943,0,0,0,0,0.414251545071004,0,0.720248245844059,0.946978942340841,0.983821158737019,0.771335564436891,2.09280550275367,1.60964040839772,1.5179494507732,0.658239399653922,0.985004784474571,1.05389452409612,1.31579988682799,0.878200461164203,1.07365135008297,1.68231958851302,1.13195073617213,0,0.264450566663544,0.426576501070468,0.928946687441754,0.644337306610467,1.21010114774006,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.569003702859245,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.651859905768103,1.01847051465113,0.469380496577004,2.01007508930179,0.238043640886014,1.17080188714679,1.10344600874334,0.8858587585951,0.637819074629948,0,0,0,0,0,0,0,4.81651769963376,5.97779601620236,0,0.252470927204373,4.73262329124385,5.0757036758563,6.89354872744957,5.4962823529087,6.01556420022464,6.79383673893198,9.31064613852257,5.26060544240361,6.7198922250909,2.24924921495265,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,4.08527526904546,0.900305470156551,0.388076051348264,1.92903331528433,3.90148514013002,5.35106452806212,2.63278432963394,0.913394847343798,0.23467170806371,0,0.661585194164886,0,0.807322133479528,0.120625849856312,0.238744688006273,0,0,2.03967832211561,0,0,0,0,0,0,0,0.139951452323658,0,0,0.316335993581135,1.82987520414164,2.16010681643603,1.67270636811575,1.09181281873089,0.539457385539283,0.826534557253359,0.26175594198403,0.259229946583586,0,0.56369293868419,0.448549638131936,0.330916980914195,0,0.129159823477731,0,0.469428954583016,0.13020438484395,0.314578033277133,1.44950472495604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0,0,0.214368379079066,0,0.564751842617067,1.38097570952153,0,0.859265911718438,1.37016503954128,0.755393897389701,0,0.45032120322422,2.71885445390523,2.07104124700728,0.31136204275253,0.798049746802062,1.53660245178721,1.94485373654635,0.838452650511929,0.367687016900028,1.11123363900808,0.824140228955577,0.962757628775446,1.26348605881899,1.77435509923168,0.943131706930381,1.03005658216871,1.53660365771686,0.976402972245426,1.42888107384922,1.50649623728312,0.578727661391115,0.824171801606613,1.17759136107518,0.342869252385415,0.70990322463735,1.1921809497366,1.30811774969096,1.41164070622996,0.930760686808441,1.28049581010941,2.10455769150274,0.950628796921032,2.24456908663095,1.89816028998679,1.0835493061312,2.04615521584845,1.08455788830176,1.35034627686799,0.499621155875892,0.467863216890817,0.429742108096597,0.191288332068843,0,0.463735671240843|short_description=p2@Zfp536}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:243937 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc009gko.1_5end | |||
|cluster_id=chr7:38558574..38558611,- | |||
|description=CAGE_peak_2_at_Zfp536_5end | |||
|id=chr7:38558574..38558611,- | |||
|ontology_enrichment_celltype=CL:0000540!1.84e-18!33;CL:0000047!1.84e-18!33;CL:0000031!1.84e-18!33;CL:0000404!1.84e-18!33;CL:0000221!2.71e-15!44;CL:0000133!2.71e-15!44;CL:0002319!4.05e-15!43;CL:0000393!2.32e-13!39;CL:0000211!2.32e-13!39;CL:0000117!1.29e-11!23;CL:0000337!1.29e-11!23;CL:0000055!8.62e-11!50;CL:0000107!1.21e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.57e-25,33;CL:0000047,4.57e-25,33;CL:0000031,4.57e-25,33;CL:0000404,4.57e-25,33;CL:0002319,5.73e-21,43;CL:0000221,3.39e-20,44;CL:0000133,3.39e-20,44;CL:0000393,2.42e-19,39;CL:0000211,2.42e-19,39;CL:0000117,3.21e-15,23;CL:0000337,3.21e-15,23;CL:0000107,2.22e-10,9;CL:0002321,2.65e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.45e-26!75;UBERON:0001016!5.45e-26!75;UBERON:0004121!9.02e-26!102;UBERON:0000924!9.02e-26!102;UBERON:0006601!9.02e-26!102;UBERON:0001017!1.75e-24!73;UBERON:0005743!1.75e-24!73;UBERON:0002346!6.36e-19!71;UBERON:0003075!6.36e-19!71;UBERON:0007284!6.36e-19!71;UBERON:0000033!6.43e-17!63;UBERON:0001049!5.51e-14!52;UBERON:0005068!5.51e-14!52;UBERON:0006241!5.51e-14!52;UBERON:0007135!5.51e-14!52;UBERON:0003056!1.54e-13!49;UBERON:0000955!4.38e-13!50;UBERON:0006238!4.38e-13!50;UBERON:0002616!1.35e-12!49;UBERON:0003080!6.62e-10!40;UBERON:0002780!2.12e-09!39;UBERON:0001890!2.12e-09!39;UBERON:0006240!2.12e-09!39;UBERON:0000010!5.17e-09!11;UBERON:0002020!3.90e-08!34;UBERON:0002410!1.21e-07!9;UBERON:0000153!9.61e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.56e-31,75;UBERON:0004121,3.72e-30,95;UBERON:0000924,3.72e-30,95;UBERON:0006601,3.72e-30,95;UBERON:0001017,5.14e-29,73;UBERON:0002346,2.68e-23,64;UBERON:0003075,2.68e-23,64;UBERON:0007284,2.68e-23,64;UBERON:0010371,1.55e-19,73;UBERON:0010314,1.99e-17,92;UBERON:0000073,3.72e-17,54;UBERON:0001049,1.40e-15,52;UBERON:0005068,1.40e-15,52;UBERON:0006241,1.40e-15,52;UBERON:0007135,1.40e-15,52;UBERON:0003056,5.43e-14,49;UBERON:0000010,2.34e-12,11;UBERON:0000955,2.57e-12,47;UBERON:0006238,2.57e-12,47;UBERON:0002616,1.08e-11,46;UBERON:0002410,2.22e-10,9;UBERON:0003080,1.57e-09,40;UBERON:0002780,6.79e-09,39;UBERON:0001890,6.79e-09,39;UBERON:0006240,6.79e-09,39;UBERON:0002020,7.19e-09,34;UBERON:0003076,1.38e-07,12;UBERON:0003057,1.38e-07,12 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0,3.64169629547276,5.28990979272033,3.80298842103708,0,0.889294796111139,0,0,0,0.599200221036809,0,1.03689612308478,1.08004750665353,0.630974884054146,3.14216082844184,1.98781686856452,1.22490799214954,1.82106394934649,1.83843757322004,4.40463523997555,2.17068474744819,3.07213066512487,2.2420668914133,2.01272815925301,1.56274011167028,6.97957497503452,5.06486349028512,3.97275444219706,4.41942878210502,2.56269025438385,2.60959224155421,6.20954785332109,5.36558076758177,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.45673551887624,0,0.742210695324124,1.04091196059682,0,0.230615497256059,0.452167921657868,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0.220841518460394,0,0,19.9090941967852,18.2218634927706,0,0,0,0,3.2953940669061,2.74500361691176,0.376963056338593,2.08589184230732,2.04572365864264,2.90903262383384,2.92034273521964,0,0,0.252722758433675,2.94618598241064,1.17108398666433,0.229902104433473,1.0803727788321,1.65775299619287,4.08218994907967,6.14945857367279,6.93392761741993,15.2634988736019,0.215567992932842,0.567318240503458,0.527853372491847,0.219195732427575,1.39023624612799,1.0447564995665,2.05782136407943,0,0,0,0,0.414251545071004,0,0.720248245844059,0.946978942340841,0.983821158737019,0.771335564436891,2.09280550275367,1.60964040839772,1.5179494507732,0.658239399653922,0.985004784474571,1.05389452409612,1.31579988682799,0.878200461164203,1.07365135008297,1.68231958851302,1.13195073617213,0,0.264450566663544,0.426576501070468,0.928946687441754,0.644337306610467,1.21010114774006,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.569003702859245,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.651859905768103,1.01847051465113,0.469380496577004,2.01007508930179,0.238043640886014,1.17080188714679,1.10344600874334,0.8858587585951,0.637819074629948,0,0,0,0,0,0,0,4.81651769963376,5.97779601620236,0,0.252470927204373,4.73262329124385,5.0757036758563,6.89354872744957,5.4962823529087,6.01556420022464,6.79383673893198,9.31064613852257,5.26060544240361,6.7198922250909,2.24924921495265,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,4.08527526904546,0.900305470156551,0.388076051348264,1.92903331528433,3.90148514013002,5.35106452806212,2.63278432963394,0.913394847343798,0.23467170806371,0,0.661585194164886,0,0.807322133479528,0.120625849856312,0.238744688006273,0,0,2.03967832211561,0,0,0,0,0,0,0,0.139951452323658,0,0,0.316335993581135,1.82987520414164,2.16010681643603,1.67270636811575,1.09181281873089,0.539457385539283,0.826534557253359,0.26175594198403,0.259229946583586,0,0.56369293868419,0.448549638131936,0.330916980914195,0,0.129159823477731,0,0.469428954583016,0.13020438484395,0.314578033277133,1.44950472495604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0,0,0.214368379079066,0,0.564751842617067,1.38097570952153,0,0.859265911718438,1.37016503954128,0.755393897389701,0,0.45032120322422,2.71885445390523,2.07104124700728,0.31136204275253,0.798049746802062,1.53660245178721,1.94485373654635,0.838452650511929,0.367687016900028,1.11123363900808,0.824140228955577,0.962757628775446,1.26348605881899,1.77435509923168,0.943131706930381,1.03005658216871,1.53660365771686,0.976402972245426,1.42888107384922,1.50649623728312,0.578727661391115,0.824171801606613,1.17759136107518,0.342869252385415,0.70990322463735,1.1921809497366,1.30811774969096,1.41164070622996,0.930760686808441,1.28049581010941,2.10455769150274,0.950628796921032,2.24456908663095,1.89816028998679,1.0835493061312,2.04615521584845,1.08455788830176,1.35034627686799,0.499621155875892,0.467863216890817,0.429742108096597,0.191288332068843,0,0.463735671240843 | |||
|short_description=p2@Zfp536 | |||
}} |
Revision as of 03:46, 5 August 2015
Short description: | p2@Zfp536 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp536_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc009gko.1_5end |
EntrezGene: | 243937 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.57e-25 | 33 |
neuronal stem cell | 4.57e-25 | 33 |
neuroblast | 4.57e-25 | 33 |
electrically signaling cell | 4.57e-25 | 33 |
neural cell | 5.73e-21 | 43 |
ectodermal cell | 3.39e-20 | 44 |
neurectodermal cell | 3.39e-20 | 44 |
electrically responsive cell | 2.42e-19 | 39 |
electrically active cell | 2.42e-19 | 39 |
CNS neuron (sensu Vertebrata) | 3.21e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.21e-15 | 23 |
autonomic neuron | 2.22e-10 | 9 |
embryonic cell | 2.65e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.56e-31 | 75 |
ectoderm-derived structure | 3.72e-30 | 95 |
ectoderm | 3.72e-30 | 95 |
presumptive ectoderm | 3.72e-30 | 95 |
central nervous system | 5.14e-29 | 73 |
neurectoderm | 2.68e-23 | 64 |
neural plate | 2.68e-23 | 64 |
presumptive neural plate | 2.68e-23 | 64 |
ecto-epithelium | 1.55e-19 | 73 |
structure with developmental contribution from neural crest | 1.99e-17 | 92 |
regional part of nervous system | 3.72e-17 | 54 |
neural tube | 1.40e-15 | 52 |
neural rod | 1.40e-15 | 52 |
future spinal cord | 1.40e-15 | 52 |
neural keel | 1.40e-15 | 52 |
pre-chordal neural plate | 5.43e-14 | 49 |
peripheral nervous system | 2.34e-12 | 11 |
brain | 2.57e-12 | 47 |
future brain | 2.57e-12 | 47 |
regional part of brain | 1.08e-11 | 46 |
autonomic nervous system | 2.22e-10 | 9 |
anterior neural tube | 1.57e-09 | 40 |
regional part of forebrain | 6.79e-09 | 39 |
forebrain | 6.79e-09 | 39 |
future forebrain | 6.79e-09 | 39 |
gray matter | 7.19e-09 | 34 |
posterior neural tube | 1.38e-07 | 12 |
chordal neural plate | 1.38e-07 | 12 |