FFCP PHASE1:Mm9::chr7:4225757..4225765,+: Difference between revisions
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{{FFCP|EntrezGene=18729|HGNC=|MCL_coexpression_id=67|UniProt=A2NTK3,P97484|association_with_transcript=12bp_to_NM_011093,uc009exg.1,uc009exh.1_5end|description=CAGE_peak_1_at_Pira6_5end|id=chr7:4225757..4225765,+|ontology_enrichment_celltype=CL:0000988!3.17e-17!32;CL:0002032!3.17e-17!32;CL:0000037!3.17e-17!32;CL:0000566!3.17e-17!32;CL:0000837!3.17e-17!32;CL:0002031!4.13e-15!25;CL:0000219!1.81e-14!54;CL:0002320!3.58e-14!46;CL:0000134!3.58e-14!46;CL:0000049!2.97e-12!19;CL:0000553!2.79e-11!6;CL:0000556!2.79e-11!6;CL:0000034!4.24e-10!97;CL:0000763!7.88e-10!16;CL:0000839!1.14e-09!13;CL:0000144!9.98e-09!121;CL:0000012!9.98e-09!121;CL:0000063!1.21e-08!66;CL:0000738!1.72e-08!17;CL:0002087!1.72e-08!17;CL:0000414!3.09e-08!11;CL:0000723!5.39e-08!91;CL:0000048!5.39e-08!91;CL:0000215!1.15e-07!3;CL:0000050!2.20e-07!9;CL:0000838!8.10e-07!12|ontology_enrichment_celltype_v019_2=CL:0000553,3.04e-20,6;CL:0000556,3.04e-20,6;CL:0000839,3.17e-18,13;CL:0002031,7.00e-15,25;CL:0000763,1.10e-14,16;CL:0000050,1.77e-13,9;CL:0000049,2.94e-12,19;CL:0002476,1.08e-11,2;CL:0000988,2.28e-11,32;CL:0002032,2.28e-11,32;CL:0000037,2.28e-11,32;CL:0000837,2.28e-11,32;CL:0002320,2.65e-09,46;CL:0000134,2.65e-09,46;CL:0000219,1.03e-07,54;CL:0002027,2.58e-07,3;CL:0002006,2.58e-07,3;CL:0002024,2.58e-07,3;CL:0000723,2.70e-07,91;CL:0000048,2.70e-07,91|ontology_enrichment_disease=DOID:0060100!2.79e-09!3;DOID:4045!2.79e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.11e-16,3;DOID:4045,4.11e-16,3;DOID:0050686,2.61e-08,6|ontology_enrichment_uberon=UBERON:0002384!3.58e-14!46;UBERON:0002371!7.88e-10!16;UBERON:0002204!2.43e-08!32;UBERON:0002465!3.77e-08!3;UBERON:0001474!9.19e-07!22;UBERON:0004765!9.19e-07!22;UBERON:0001434!9.19e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-14,16;UBERON:0002204,2.03e-14,32;UBERON:0001474,1.72e-10,22;UBERON:0004765,1.72e-10,22;UBERON:0001434,1.72e-10,22;UBERON:0001962,3.69e-10,2;UBERON:0001961,3.69e-10,2;UBERON:0001744,3.69e-10,2;UBERON:0002384,2.65e-09,46;UBERON:0002193,3.98e-07,48;UBERON:0002405,3.98e-07,48;UBERON:0002465,4.63e-07,3|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,5.4668322195253,3.49780939064073,17.0349569293448,13.5743289269681,12.3072999021429,0,0,2.87319768052829,2.23989391910769,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,41.016099812217,31.253413780952,31.4114246384279,23.5292595212406,33.4692287629638,35.4422557712742,0,0,0,0,0,0,0,0,0,4.02678254538567,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0.289864488701678,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,215.631536033159,188.735272285092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Pira6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18729 | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2NTK3,uniprot:P97484 | |||
|association_with_transcript=12bp_to_NM_011093,uc009exg.1,uc009exh.1_5end | |||
|cluster_id=chr7:4225757..4225765,+ | |||
|description=CAGE_peak_1_at_Pira6_5end | |||
|id=chr7:4225757..4225765,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.17e-17!32;CL:0002032!3.17e-17!32;CL:0000037!3.17e-17!32;CL:0000566!3.17e-17!32;CL:0000837!3.17e-17!32;CL:0002031!4.13e-15!25;CL:0000219!1.81e-14!54;CL:0002320!3.58e-14!46;CL:0000134!3.58e-14!46;CL:0000049!2.97e-12!19;CL:0000553!2.79e-11!6;CL:0000556!2.79e-11!6;CL:0000034!4.24e-10!97;CL:0000763!7.88e-10!16;CL:0000839!1.14e-09!13;CL:0000144!9.98e-09!121;CL:0000012!9.98e-09!121;CL:0000063!1.21e-08!66;CL:0000738!1.72e-08!17;CL:0002087!1.72e-08!17;CL:0000414!3.09e-08!11;CL:0000723!5.39e-08!91;CL:0000048!5.39e-08!91;CL:0000215!1.15e-07!3;CL:0000050!2.20e-07!9;CL:0000838!8.10e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.04e-20,6;CL:0000556,3.04e-20,6;CL:0000839,3.17e-18,13;CL:0002031,7.00e-15,25;CL:0000763,1.10e-14,16;CL:0000050,1.77e-13,9;CL:0000049,2.94e-12,19;CL:0002476,1.08e-11,2;CL:0000988,2.28e-11,32;CL:0002032,2.28e-11,32;CL:0000037,2.28e-11,32;CL:0000837,2.28e-11,32;CL:0002320,2.65e-09,46;CL:0000134,2.65e-09,46;CL:0000219,1.03e-07,54;CL:0002027,2.58e-07,3;CL:0002006,2.58e-07,3;CL:0002024,2.58e-07,3;CL:0000723,2.70e-07,91;CL:0000048,2.70e-07,91 | |||
|ontology_enrichment_disease=DOID:0060100!2.79e-09!3;DOID:4045!2.79e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.11e-16,3;DOID:4045,4.11e-16,3;DOID:0050686,2.61e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.58e-14!46;UBERON:0002371!7.88e-10!16;UBERON:0002204!2.43e-08!32;UBERON:0002465!3.77e-08!3;UBERON:0001474!9.19e-07!22;UBERON:0004765!9.19e-07!22;UBERON:0001434!9.19e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.10e-14,16;UBERON:0002204,2.03e-14,32;UBERON:0001474,1.72e-10,22;UBERON:0004765,1.72e-10,22;UBERON:0001434,1.72e-10,22;UBERON:0001962,3.69e-10,2;UBERON:0001961,3.69e-10,2;UBERON:0001744,3.69e-10,2;UBERON:0002384,2.65e-09,46;UBERON:0002193,3.98e-07,48;UBERON:0002405,3.98e-07,48;UBERON:0002465,4.63e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,5.4668322195253,3.49780939064073,17.0349569293448,13.5743289269681,12.3072999021429,0,0,2.87319768052829,2.23989391910769,1.37645568640302,0,0,0,0,0,0,0,0,0,0,0,0,41.016099812217,31.253413780952,31.4114246384279,23.5292595212406,33.4692287629638,35.4422557712742,0,0,0,0,0,0,0,0,0,4.02678254538567,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0.289864488701678,1.72084775396277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,215.631536033159,188.735272285092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Pira6 | |||
}} |
Revision as of 04:10, 5 August 2015
Short description: | p1@Pira6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pira6_5end |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | 12bp_to_NM_011093, uc009exg.1, uc009exh.1_5end |
EntrezGene: | 18729 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.04e-20 | 6 |
megakaryocyte | 3.04e-20 | 6 |
myeloid lineage restricted progenitor cell | 3.17e-18 | 13 |
hematopoietic lineage restricted progenitor cell | 7.00e-15 | 25 |
myeloid cell | 1.10e-14 | 16 |
megakaryocyte-erythroid progenitor cell | 1.77e-13 | 9 |
common myeloid progenitor | 2.94e-12 | 19 |
bone marrow macrophage | 1.08e-11 | 2 |
hematopoietic cell | 2.28e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.28e-11 | 32 |
hematopoietic stem cell | 2.28e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.28e-11 | 32 |
connective tissue cell | 2.65e-09 | 46 |
mesenchymal cell | 2.65e-09 | 46 |
motile cell | 1.03e-07 | 54 |
CD9-positive, CD41-positive megakaryocyte cell | 2.58e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.58e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.58e-07 | 3 |
somatic stem cell | 2.70e-07 | 91 |
multi fate stem cell | 2.70e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.10e-14 | 16 |
musculoskeletal system | 2.03e-14 | 32 |
bone element | 1.72e-10 | 22 |
skeletal element | 1.72e-10 | 22 |
skeletal system | 1.72e-10 | 22 |
gut-associated lymphoid tissue | 3.69e-10 | 2 |
mucosa-associated lymphoid tissue | 3.69e-10 | 2 |
lymphoid tissue | 3.69e-10 | 2 |
connective tissue | 2.65e-09 | 46 |
hemolymphoid system | 3.98e-07 | 48 |
immune system | 3.98e-07 | 48 |
lymphoid system | 4.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.11e-16 | 3 |
muscle cancer | 4.11e-16 | 3 |
organ system cancer | 2.61e-08 | 6 |