FFCP PHASE1:Mm9::chr7:52358439..52358450,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1072|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:52358439..52358450,-|id=chr7:52358439..52358450,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.84e-13,3;CL:0000359,1.84e-13,3;CL:0002539,1.84e-13,3;CL:0000514,1.84e-13,3;CL:0000222,5.50e-10,7;CL:0000680,5.53e-07,6;CL:0000187,5.53e-07,6;CL:0000056,5.53e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.76e-14,5;UBERON:0007500,6.76e-14,5;UBERON:0001981,6.76e-14,5;UBERON:0002049,6.76e-14,5;UBERON:0007798,6.76e-14,5;UBERON:0004537,6.76e-14,5;UBERON:0006965,6.76e-14,5;UBERON:0001135,1.84e-13,3;UBERON:0004237,1.84e-13,3;UBERON:0004695,1.84e-13,3;UBERON:0002111,1.84e-13,3;UBERON:0004178,1.84e-13,3;UBERON:0000947,3.11e-10,4;UBERON:0001637,3.11e-10,4;UBERON:0004573,3.11e-10,4;UBERON:0003509,3.11e-10,4;UBERON:0004571,3.11e-10,4;UBERON:0010191,3.11e-10,4;UBERON:0004572,3.11e-10,4;UBERON:0005631,3.23e-07,3;UBERON:0000478,3.23e-07,3;UBERON:0000158,3.23e-07,3|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.760093677825496,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,1.21652317463417,1.65192076945513,0.782391344348039,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.514518872071894,0.573066879877513,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0.898800331555214,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0.0755715601067855,1.15945795480671,2.58127163094416,0,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0.779358013808606,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0,0.150722640552623,0,0.502666365318702,11.6181634835156,0.433798070759735,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0,0,0,0.229902104433473,0,0.30140963567143,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.528901133327089,0,0.232236671860439,0.257734922644187,0,1.33426826306922,5.89699440948933,0.474529061544512,5.76446341534038,6.28338022000674,6.16765063327568,7.01870713628832,0,0.432276099749388,0,0,0,0,0.407302655690628,0,0.140271639780637,0.379419222745544,0.442830443938806,1.41298855057237,0.987177311374404,0.296452627087149,0,0,0,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0.744281895337007,1.24815069245824,0.505157755894224,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0.664394068946325,0.478364305972461,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,2.06742634534577,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0.469343416127421,1.90648863777438,0,0.65954501176592,0.161464426695906,0,0.119372344003136,0,1.1659233465194,0,0,0,0,0,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0.216010681643603,0,1.31017538247707,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0.2604087696879,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.579568782096571,0.750729901804728,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0.243106717068294,0,0,0.222246727801615,1.03017528619447,0,0,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.229741875822453,0,0.579421629724277,0.192909220463705,0.824171801606613,0,0,0,0.715308569841963,0.581385666529314,0,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0,0,0,0.859484216193193,0.191288332068843,0,0|short_description=p@chr7:52358439..52358450,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1072 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:52358439..52358450,- | |||
|description=CAGE_peak_at_chr7:52358439..52358450,- | |||
|id=chr7:52358439..52358450,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.84e-13,3;CL:0000359,1.84e-13,3;CL:0002539,1.84e-13,3;CL:0000514,1.84e-13,3;CL:0000222,5.50e-10,7;CL:0000680,5.53e-07,6;CL:0000187,5.53e-07,6;CL:0000056,5.53e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,6.76e-14,5;UBERON:0007500,6.76e-14,5;UBERON:0001981,6.76e-14,5;UBERON:0002049,6.76e-14,5;UBERON:0007798,6.76e-14,5;UBERON:0004537,6.76e-14,5;UBERON:0006965,6.76e-14,5;UBERON:0001135,1.84e-13,3;UBERON:0004237,1.84e-13,3;UBERON:0004695,1.84e-13,3;UBERON:0002111,1.84e-13,3;UBERON:0004178,1.84e-13,3;UBERON:0000947,3.11e-10,4;UBERON:0001637,3.11e-10,4;UBERON:0004573,3.11e-10,4;UBERON:0003509,3.11e-10,4;UBERON:0004571,3.11e-10,4;UBERON:0010191,3.11e-10,4;UBERON:0004572,3.11e-10,4;UBERON:0005631,3.23e-07,3;UBERON:0000478,3.23e-07,3;UBERON:0000158,3.23e-07,3 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.760093677825496,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,1.21652317463417,1.65192076945513,0.782391344348039,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.514518872071894,0.573066879877513,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0.898800331555214,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0.0755715601067855,1.15945795480671,2.58127163094416,0,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0.779358013808606,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0,0.150722640552623,0,0.502666365318702,11.6181634835156,0.433798070759735,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0,0,0,0.229902104433473,0,0.30140963567143,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.528901133327089,0,0.232236671860439,0.257734922644187,0,1.33426826306922,5.89699440948933,0.474529061544512,5.76446341534038,6.28338022000674,6.16765063327568,7.01870713628832,0,0.432276099749388,0,0,0,0,0.407302655690628,0,0.140271639780637,0.379419222745544,0.442830443938806,1.41298855057237,0.987177311374404,0.296452627087149,0,0,0,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0.744281895337007,1.24815069245824,0.505157755894224,0.179397413521912,0,0.369506380333209,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0.664394068946325,0.478364305972461,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,2.06742634534577,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0.469343416127421,1.90648863777438,0,0.65954501176592,0.161464426695906,0,0.119372344003136,0,1.1659233465194,0,0,0,0,0,0,0.457556346413045,0,0,0,0,0,0.203319467126849,0.216010681643603,0,1.31017538247707,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0.2604087696879,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.579568782096571,0.750729901804728,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0.243106717068294,0,0,0.222246727801615,1.03017528619447,0,0,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.229741875822453,0,0.579421629724277,0.192909220463705,0.824171801606613,0,0,0,0.715308569841963,0.581385666529314,0,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0,0,0,0.859484216193193,0.191288332068843,0,0 | |||
|short_description=p@chr7:52358439..52358450,- | |||
}} |
Latest revision as of 08:00, 5 August 2015
Short description: | p@chr7:52358439..52358450, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:52358439..52358450, - |
Coexpression cluster: | MCL_coexpression_mm9:1072 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.84e-13 | 3 |
vascular associated smooth muscle cell | 1.84e-13 | 3 |
aortic smooth muscle cell | 1.84e-13 | 3 |
smooth muscle myoblast | 1.84e-13 | 3 |
mesodermal cell | 5.50e-10 | 7 |
muscle precursor cell | 5.53e-07 | 6 |
muscle cell | 5.53e-07 | 6 |
myoblast | 5.53e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vessel | 6.76e-14 | 5 |
epithelial tube open at both ends | 6.76e-14 | 5 |
blood vessel | 6.76e-14 | 5 |
vasculature | 6.76e-14 | 5 |
vascular system | 6.76e-14 | 5 |
blood vasculature | 6.76e-14 | 5 |
vascular cord | 6.76e-14 | 5 |
smooth muscle tissue | 1.84e-13 | 3 |
blood vessel smooth muscle | 1.84e-13 | 3 |
arterial system smooth muscle | 1.84e-13 | 3 |
artery smooth muscle tissue | 1.84e-13 | 3 |
aorta smooth muscle tissue | 1.84e-13 | 3 |
aorta | 3.11e-10 | 4 |
artery | 3.11e-10 | 4 |
systemic artery | 3.11e-10 | 4 |
arterial blood vessel | 3.11e-10 | 4 |
systemic arterial system | 3.11e-10 | 4 |
aortic system | 3.11e-10 | 4 |
arterial system | 3.11e-10 | 4 |
extraembryonic membrane | 3.23e-07 | 3 |
extraembryonic structure | 3.23e-07 | 3 |
membranous layer | 3.23e-07 | 3 |