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FFCP PHASE1:Mm9::chr7:63023588..63023603,+: Difference between revisions

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{{FFCP|EntrezGene=233274|HGNC=|MCL_coexpression_id=63|UniProt=Q4QQK7,G3X9N0|association_with_transcript=0bp_to_ENSMUST00000060416,ENSMUST00000094360_5end|description=CAGE_peak_1_at_Siglech_5end|id=chr7:63023588..63023603,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!6.28e-13!50;UBERON:0006238!6.28e-13!50;UBERON:0002616!2.33e-12!49;UBERON:0001049!2.79e-12!52;UBERON:0005068!2.79e-12!52;UBERON:0006241!2.79e-12!52;UBERON:0007135!2.79e-12!52;UBERON:0007023!7.48e-11!51;UBERON:0000033!8.06e-11!63;UBERON:0003080!2.38e-10!40;UBERON:0002780!8.22e-10!39;UBERON:0001890!8.22e-10!39;UBERON:0006240!8.22e-10!39;UBERON:0002020!1.45e-09!34;UBERON:0003056!5.31e-09!49;UBERON:0007811!6.31e-09!86;UBERON:0002791!7.38e-09!29;UBERON:0003528!7.38e-09!29;UBERON:0001893!7.38e-09!29;UBERON:0002021!1.37e-07!10;UBERON:0000411!1.37e-07!10;UBERON:0001950!1.37e-07!10;UBERON:0000153!1.60e-07!94;UBERON:0002346!3.09e-07!71;UBERON:0003075!3.09e-07!71;UBERON:0007284!3.09e-07!71;UBERON:0000956!3.37e-07!21;UBERON:0001869!3.37e-07!21;UBERON:0000203!3.37e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.35e-16,54;UBERON:0001049,3.90e-15,52;UBERON:0005068,3.90e-15,52;UBERON:0006241,3.90e-15,52;UBERON:0007135,3.90e-15,52;UBERON:0000955,3.13e-14,47;UBERON:0006238,3.13e-14,47;UBERON:0002616,1.69e-13,46;UBERON:0003080,4.56e-12,40;UBERON:0002020,4.90e-12,34;UBERON:0003528,2.24e-11,29;UBERON:0002791,2.24e-11,29;UBERON:0001893,2.24e-11,29;UBERON:0002780,2.29e-11,39;UBERON:0001890,2.29e-11,39;UBERON:0006240,2.29e-11,39;UBERON:0011216,3.78e-11,194;UBERON:0001017,1.03e-10,73;UBERON:0002346,2.68e-10,64;UBERON:0003075,2.68e-10,64;UBERON:0007284,2.68e-10,64;UBERON:0007023,4.69e-10,51;UBERON:0001016,4.82e-10,75;UBERON:0002021,8.96e-10,10;UBERON:0000411,8.96e-10,10;UBERON:0001950,8.96e-10,10;UBERON:0000956,2.16e-09,21;UBERON:0001869,2.16e-09,21;UBERON:0000203,2.16e-09,21;UBERON:0002619,3.12e-09,17;UBERON:0010371,7.56e-09,73;UBERON:0003056,1.64e-08,49;UBERON:0004121,3.22e-07,95;UBERON:0000924,3.22e-07,95;UBERON:0006601,3.22e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33176833270964,4.85940641735582,0.699561878128147,9.30613387806801,11.9289557236993,3.81950686618227,4.25216450755349,6.056748023254,7.83599367416806,3.51983330145495,3.21172993494038,0,0,0,0.190023419456374,1.51218077855958,2.66076612786366,0,0,0,0,0,0,0.418531630736908,0,1.57057123192139,1.76469446409304,1.36609096991689,1.94204141212461,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0.725827286159344,1.08004750665353,1.05162480675691,1.14260393761521,1.32521124570968,1.10241719293459,1.24599112323707,1.83843757322004,8.8092704799511,7.2781782708557,9.21639199537461,1.58263545276233,0.731901148819277,0,7.2587579740359,6.75315132038016,8.70950012327818,4.12480019663135,2.42031857358475,0.372798891650601,0,0,0,3.44169550792555,0,0,0,0,4.91555470461132,0,0,0,0,0,0,0,0,0,0,2.05530983494308,136.460264682059,0.445326417194474,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0.741584903203122,1.3013942122792,18.5768215909474,0.808834249737046,5.07935492458905,6.30337829075789,1.86391761218122,4.39171195517321,3.56059401582874,1.02182822083437,4.07371423320129,0.599902730993408,1.65191295194984,11.6836698735762,20.5875271268382,2.01046963380583,16.5133104182663,19.6900902144355,17.0386196538839,18.0087802005211,0.305518091550949,8.08645308965605,1.76905930903572,0.420883711772948,1.17108398666433,0.689706313300419,0.540186389416048,0,0.272145996605311,0.512454881139399,0.374806898238915,0.776110112217047,0,0.189106080167819,0.351902248327898,0,0,0,0.61734640922383,0.398068533636986,0,0,0.284163499395593,0,0,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0.292399974850665,0.658650345873152,1.34206418760372,19.767255165028,2.46971069710283,0.330418782983798,0.264450566663544,0.639864751605702,0.696710015581316,0.38660238396628,1.61346819698674,1.55664630691409,0.760902504450237,2.84717436926707,0.988193728344065,2.5133520880027,2.58643413653496,2.72949721966768,2.69645822596266,1.72910439899755,1.59313018603494,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0,0.316182685621286,0.295220295959204,0.470996183524124,0.616985819609003,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0.72353147925725,1.2731292589071,1.72617682470486,0.648540907100142,0.823684239564244,0,2.60498663367952,4.05648975048929,1.26289438973556,0.896987067609561,0.482443521363367,3.32555742299888,0.568474235311454,0.488894929326078,0,0.234690248288502,0,0.238043640886014,0,0.472905432318573,0.221464689648775,1.43509291791738,2.78567635016755,3.28101465545202,1.88043776155965,0,0,3.93411418415229,3.58717770196152,13.1651483789989,12.0728037189969,0,0,0,0,0,0,0,0,0,0,0,11.8888887076069,0.851640511249612,0,0.325773918707152,1.97964147567043,1.32745138339963,0,0.906970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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:233274
|HGNC=
|MCL_coexpression_id=63
|TSSclassifier=NA
|UniProt=uniprot:Q4QQK7,uniprot:G3X9N0
|association_with_transcript=0bp_to_ENSMUST00000060416,ENSMUST00000094360_5end
|cluster_id=chr7:63023588..63023603,+
|description=CAGE_peak_1_at_Siglech_5end
|id=chr7:63023588..63023603,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!6.28e-13!50;UBERON:0006238!6.28e-13!50;UBERON:0002616!2.33e-12!49;UBERON:0001049!2.79e-12!52;UBERON:0005068!2.79e-12!52;UBERON:0006241!2.79e-12!52;UBERON:0007135!2.79e-12!52;UBERON:0007023!7.48e-11!51;UBERON:0000033!8.06e-11!63;UBERON:0003080!2.38e-10!40;UBERON:0002780!8.22e-10!39;UBERON:0001890!8.22e-10!39;UBERON:0006240!8.22e-10!39;UBERON:0002020!1.45e-09!34;UBERON:0003056!5.31e-09!49;UBERON:0007811!6.31e-09!86;UBERON:0002791!7.38e-09!29;UBERON:0003528!7.38e-09!29;UBERON:0001893!7.38e-09!29;UBERON:0002021!1.37e-07!10;UBERON:0000411!1.37e-07!10;UBERON:0001950!1.37e-07!10;UBERON:0000153!1.60e-07!94;UBERON:0002346!3.09e-07!71;UBERON:0003075!3.09e-07!71;UBERON:0007284!3.09e-07!71;UBERON:0000956!3.37e-07!21;UBERON:0001869!3.37e-07!21;UBERON:0000203!3.37e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.35e-16,54;UBERON:0001049,3.90e-15,52;UBERON:0005068,3.90e-15,52;UBERON:0006241,3.90e-15,52;UBERON:0007135,3.90e-15,52;UBERON:0000955,3.13e-14,47;UBERON:0006238,3.13e-14,47;UBERON:0002616,1.69e-13,46;UBERON:0003080,4.56e-12,40;UBERON:0002020,4.90e-12,34;UBERON:0003528,2.24e-11,29;UBERON:0002791,2.24e-11,29;UBERON:0001893,2.24e-11,29;UBERON:0002780,2.29e-11,39;UBERON:0001890,2.29e-11,39;UBERON:0006240,2.29e-11,39;UBERON:0011216,3.78e-11,194;UBERON:0001017,1.03e-10,73;UBERON:0002346,2.68e-10,64;UBERON:0003075,2.68e-10,64;UBERON:0007284,2.68e-10,64;UBERON:0007023,4.69e-10,51;UBERON:0001016,4.82e-10,75;UBERON:0002021,8.96e-10,10;UBERON:0000411,8.96e-10,10;UBERON:0001950,8.96e-10,10;UBERON:0000956,2.16e-09,21;UBERON:0001869,2.16e-09,21;UBERON:0000203,2.16e-09,21;UBERON:0002619,3.12e-09,17;UBERON:0010371,7.56e-09,73;UBERON:0003056,1.64e-08,49;UBERON:0004121,3.22e-07,95;UBERON:0000924,3.22e-07,95;UBERON:0006601,3.22e-07,95
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33176833270964,4.85940641735582,0.699561878128147,9.30613387806801,11.9289557236993,3.81950686618227,4.25216450755349,6.056748023254,7.83599367416806,3.51983330145495,3.21172993494038,0,0,0,0.190023419456374,1.51218077855958,2.66076612786366,0,0,0,0,0,0,0.418531630736908,0,1.57057123192139,1.76469446409304,1.36609096991689,1.94204141212461,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0.725827286159344,1.08004750665353,1.05162480675691,1.14260393761521,1.32521124570968,1.10241719293459,1.24599112323707,1.83843757322004,8.8092704799511,7.2781782708557,9.21639199537461,1.58263545276233,0.731901148819277,0,7.2587579740359,6.75315132038016,8.70950012327818,4.12480019663135,2.42031857358475,0.372798891650601,0,0,0,3.44169550792555,0,0,0,0,4.91555470461132,0,0,0,0,0,0,0,0,0,0,2.05530983494308,136.460264682059,0.445326417194474,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0.741584903203122,1.3013942122792,18.5768215909474,0.808834249737046,5.07935492458905,6.30337829075789,1.86391761218122,4.39171195517321,3.56059401582874,1.02182822083437,4.07371423320129,0.599902730993408,1.65191295194984,11.6836698735762,20.5875271268382,2.01046963380583,16.5133104182663,19.6900902144355,17.0386196538839,18.0087802005211,0.305518091550949,8.08645308965605,1.76905930903572,0.420883711772948,1.17108398666433,0.689706313300419,0.540186389416048,0,0.272145996605311,0.512454881139399,0.374806898238915,0.776110112217047,0,0.189106080167819,0.351902248327898,0,0,0,0.61734640922383,0.398068533636986,0,0,0.284163499395593,0,0,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0.292399974850665,0.658650345873152,1.34206418760372,19.767255165028,2.46971069710283,0.330418782983798,0.264450566663544,0.639864751605702,0.696710015581316,0.38660238396628,1.61346819698674,1.55664630691409,0.760902504450237,2.84717436926707,0.988193728344065,2.5133520880027,2.58643413653496,2.72949721966768,2.69645822596266,1.72910439899755,1.59313018603494,0.189667900953082,0.228497025219458,0,0.203651327845314,0.387904974335251,0,0.316182685621286,0.295220295959204,0.470996183524124,0.616985819609003,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0.72353147925725,1.2731292589071,1.72617682470486,0.648540907100142,0.823684239564244,0,2.60498663367952,4.05648975048929,1.26289438973556,0.896987067609561,0.482443521363367,3.32555742299888,0.568474235311454,0.488894929326078,0,0.234690248288502,0,0.238043640886014,0,0.472905432318573,0.221464689648775,1.43509291791738,2.78567635016755,3.28101465545202,1.88043776155965,0,0,3.93411418415229,3.58717770196152,13.1651483789989,12.0728037189969,0,0,0,0,0,0,0,0,0,0,0,11.8888887076069,0.851640511249612,0,0.325773918707152,1.97964147567043,1.32745138339963,0,0.906970670894253,0.188605079755898,0,0.614870295887855,1.29214146584111,0.363533729477506,0,3.16036757935816,1.05418608574999,0,2.04263763452273,1.26042765821917,0.517434735131018,1.07168517515796,1.24138163549592,0.713475270408282,0.987294123612726,0,0,0,0.882113592219848,0.98931751764888,0.484393280087717,0.361877549568935,0,0,2.04036585640896,18.542530201051,9.91051108627546,1.44470807574256,2.59272338317596,7.15800136617826,10.2520670790769,8.00723606222829,0.169978429993855,1.11961161858926,0.829199842826543,2.86401185404534,0.316335993581135,0.406638934253697,0.108005340821801,0.836353184057875,1.74690050996942,0.539457385539283,1.90102948168273,0,1.16653475962614,9.32008969630389,0,0.299033092087958,0.165458490457098,0.583353565032143,0.774958940866387,0.506868376472335,0.117357238645754,0.13020438484395,0.104859344425711,0,0,2.52808896502543,0.608175645870493,0.205421914329655,1.03936658382236,0.716106782669926,1.78813219303138,1.20195449519969,0.443068581523732,2.52416124870369,1.447929326445,4.2346997757473,7.50425681696094,2.79014340756955,5.37633750035217,0.680191150845634,0,0,0,1.9318959403219,0.563047426353546,0.36630324853453,0.643105137237198,2.50786052017682,14.1187960654267,10.5874804396651,13.7494923225455,13.2326950404639,8.22099023724771,15.107877947794,12.8254275044043,11.2580300806055,11.7817026335893,10.8729665467882,0.31136204275253,0,0.682934423016537,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0,0.50695859978048,0.377252682772152,0.655490552289177,0.512201219238954,0.402048282689293,0.952587382566147,0.463537303779422,0.192909220463705,0.824171801606613,0.294397840268795,0,0.354951612318675,0.715308569841963,0,0.282328141245992,0.169229215783353,0.73171189149109,0.263069711437843,0.271608227691724,0,0.474540072496697,0.492522411877817,0.409231043169689,0,0.771626443924566,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0.882365676478062,1.15933917810211
|short_description=p1@Siglech
}}

Revision as of 11:03, 5 August 2015

Short description:p1@Siglech
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Siglech_5end
Coexpression cluster:MCL_coexpression_mm9:63
Association with transcript: 0bp_to_ENSMUST00000060416, ENSMUST00000094360_5end
EntrezGene:233274
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Siglech

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.93
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H9136.46
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A411.68
corpus striatum, adult.CNhs10487.19-21D820.59
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D516.51
cortex, neonate N30.CNhs11107.1392-42F219.69
diencephalon, adult.CNhs10482.20-12F217.04
diencephalon, neonate N30.CNhs11201.1388-42B218.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.09
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E819.77
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C213.17
medulla oblongata, neonate N30.CNhs11200.1396-42A312.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C918.54
spleen, adult.CNhs10465.25-2G29.91
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D17.16
spleen, neonate N20.CNhs11112.824-19H110.25
spleen, neonate N25.CNhs11099.1354-25G38.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E44.23
thymus, neonate N20.CNhs11186.820-7A27.50
thymus, neonate N25.CNhs11125.1362-25G72.79
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.35e-1654
neural tube3.90e-1552
neural rod3.90e-1552
future spinal cord3.90e-1552
neural keel3.90e-1552
brain3.13e-1447
future brain3.13e-1447
regional part of brain1.69e-1346
anterior neural tube4.56e-1240
gray matter4.90e-1234
brain grey matter2.24e-1129
regional part of telencephalon2.24e-1129
telencephalon2.24e-1129
regional part of forebrain2.29e-1139
forebrain2.29e-1139
future forebrain2.29e-1139
organ system subdivision3.78e-11194
central nervous system1.03e-1073
neurectoderm2.68e-1064
neural plate2.68e-1064
presumptive neural plate2.68e-1064
adult organism4.69e-1051
nervous system4.82e-1075
occipital lobe8.96e-1010
visual cortex8.96e-1010
neocortex8.96e-1010
cerebral cortex2.16e-0921
cerebral hemisphere2.16e-0921
pallium2.16e-0921
regional part of cerebral cortex3.12e-0917
ecto-epithelium7.56e-0973
pre-chordal neural plate1.64e-0849
ectoderm-derived structure3.22e-0795
ectoderm3.22e-0795
presumptive ectoderm3.22e-0795
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