FFCP PHASE1:Mm9::chr18:14941703..14941730,+: Difference between revisions
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{{FFCP|EntrezGene=72504|HGNC=|UniProt=G5E8Z2|association_with_transcript=-23bp_to_ENSMUST00000169862,NM_001100449,uc008edl.2_5end|description=CAGE_peak_2_at_Taf4b_5end|id=chr18:14941703..14941730,+|ontology_enrichment_celltype=CL:0000988!1.56e-09!32;CL:0002032!1.56e-09!32;CL:0000037!1.56e-09!32;CL:0000566!1.56e-09!32;CL:0000837!1.56e-09!32;CL:0000838!5.65e-08!12;CL:0000791!2.20e-07!9;CL:0000789!2.20e-07!9;CL:0002420!2.20e-07!9;CL:0002419!2.20e-07!9;CL:0000790!2.20e-07!9;CL:0000084!2.68e-07!11;CL:0000827!2.68e-07!11;CL:0002031!3.60e-07!25;CL:0000542!5.38e-07!13;CL:0000051!5.38e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,6.89e-11,32;CL:0002032,6.89e-11,32;CL:0000037,6.89e-11,32;CL:0000837,6.89e-11,32;CL:0000838,1.76e-08,12;CL:0002031,2.07e-08,25;CL:0000791,7.60e-08,9;CL:0000789,7.60e-08,9;CL:0002420,7.60e-08,9;CL:0002419,7.60e-08,9;CL:0000790,7.60e-08,9;CL:0000084,9.38e-08,11;CL:0000827,9.38e-08,11;CL:0000542,2.71e-07,13;CL:0000051,2.71e-07,13;CL:0000624,4.32e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.79e-07,48;UBERON:0002405,1.79e-07,48;UBERON:0002390,2.67e-07,45;UBERON:0003061,2.67e-07,45;UBERON:0004177,5.97e-07,29;UBERON:0005057,5.97e-07,29|phase1_expression=1.44133962394315,0,0,0.30246421130683,0,2.01455126294268,1.63528848416868,8.90950931746876,5.20918271961167,6.55380673701582,13.3550015215894,15.7151153220813,9.58724087614752,9.70366466850871,1.66554880907831,1.21485160433896,1.39912375625629,3.62781490161973,6.30726394586398,3.39511721438424,1.7008658030214,1.68794617041505,1.56719873483361,1.11994695955385,1.14704640533585,0,0.430761996159075,0.430942465371778,0.380046838912748,1.76421090831952,0.886922042621219,6.98533740805594,9.22597181376855,0,2.3108129580102,0.831173226792462,3.47087905646027,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0.881277725829041,0.506884656097573,0.734187008646726,0.782391344348039,0,0,0.194429899074283,0.55994568650145,0,9.89917375740644,6.5282592781021,16.8046899571232,0.514518872071894,0.573066879877513,1.03134418455488,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0,0.311068836925433,0.270011876663381,0.210324961351382,0.571301968807607,0.883474163806454,0.244981598429908,0.0958454710182364,0,1.10115880999389,1.78762273319263,2.61131106535614,0.527545150920775,0.182975287204819,0,1.67509799400829,0.56276261003168,0.916789486660861,0,0.427115042397309,0.559198337475902,2.42323818666189,1.13357340160178,1.15945795480671,0,3.39985666853875,1.07940638327563,0.649776417447669,1.34408066129201,1.26399978118577,1.1930122580464,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.865964164044856,1.52015919285059,0.505524445014783,0.91347103775248,3.36619248741323,1.7813056687779,0.346970653532272,0.913396434936424,0.691846491768175,0.60289056221049,0.940709657085638,1.0053327306374,0.494389935468748,2.89198713839823,0.884610551949874,1.61766849947409,1.10420759230197,1.93950101254089,1.86391761218122,0.585561594023094,0.83778682725382,1.78819938646014,7.18890747035522,4.79922184794726,7.87835407853001,2.39665023047716,0.915001205637253,1.25654352112864,1.91206752211504,1.53429274398198,1.66230435647648,2.27137768294861,0.916554274652847,2.11491850037158,1.26361379216837,0.420883711772948,0.390361328888111,0.459804208866946,0.360124259610698,1.20563854268572,0.748401490664606,0.384341160854549,0.843315521037559,1.55222022443409,0.646703978798527,0.567318240503458,0.703804496655795,1.09597866213787,1.11218899690239,1.39300866608867,0.823128545631774,1.79130840136644,2.80885274925294,3.08817488537658,2.84163499395593,0.828503090142008,0.469052119962192,0.540186184383045,1.42046841351126,0.590292695242212,1.07986979021165,0.930135779001631,0.804820204198858,1.98501082024188,0.329119699826961,1.14917224855367,1.05389452409612,1.16959989940266,1.53685080703735,1.20785776884335,1.26173969138476,0.411618449517138,0.660837565967596,2.11560453330835,0.639864751605702,1.16118335930219,1.28867461322093,1.21010114774006,0.889512175379481,1.14135375667535,0.949058123089023,0.658795818896044,0.502670417600539,1.39269530428806,1.75467678407208,0,1.29682829924817,1.99141273254367,0.569003702859245,1.37098215131675,0,0,1.35766741017338,1.33258057791605,1.13825766823663,1.18088118383682,0.784993639206874,1.23397163921801,0.296452627087149,2.00214126859313,1.76903095601883,2.02375901146368,3.04290182082754,1.92941727801933,0,1.43848068725405,2.2698931748505,1.09824565275233,1.43768206527355,1.48856379067401,1.24815069245824,0.252578877947112,0.896987067609561,0.964887042726734,2.03228509183265,0.757965647081939,0.651859905768103,1.18821560042632,0.704070744865506,1.00503754465089,0.476087281772027,1.17080188714679,0.788175720530955,0.44292937929755,1.59454768657487,1.3109065177259,1.03610989119537,1.59113964439663,1.50791283939272,1.63171705145613,2.950585638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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72504 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G5E8Z2 | |||
|association_with_transcript=-23bp_to_ENSMUST00000169862,NM_001100449,uc008edl.2_5end | |||
|cluster_id=chr18:14941703..14941730,+ | |||
|description=CAGE_peak_2_at_Taf4b_5end | |||
|id=chr18:14941703..14941730,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.56e-09!32;CL:0002032!1.56e-09!32;CL:0000037!1.56e-09!32;CL:0000566!1.56e-09!32;CL:0000837!1.56e-09!32;CL:0000838!5.65e-08!12;CL:0000791!2.20e-07!9;CL:0000789!2.20e-07!9;CL:0002420!2.20e-07!9;CL:0002419!2.20e-07!9;CL:0000790!2.20e-07!9;CL:0000084!2.68e-07!11;CL:0000827!2.68e-07!11;CL:0002031!3.60e-07!25;CL:0000542!5.38e-07!13;CL:0000051!5.38e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.89e-11,32;CL:0002032,6.89e-11,32;CL:0000037,6.89e-11,32;CL:0000837,6.89e-11,32;CL:0000838,1.76e-08,12;CL:0002031,2.07e-08,25;CL:0000791,7.60e-08,9;CL:0000789,7.60e-08,9;CL:0002420,7.60e-08,9;CL:0002419,7.60e-08,9;CL:0000790,7.60e-08,9;CL:0000084,9.38e-08,11;CL:0000827,9.38e-08,11;CL:0000542,2.71e-07,13;CL:0000051,2.71e-07,13;CL:0000624,4.32e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.79e-07,48;UBERON:0002405,1.79e-07,48;UBERON:0002390,2.67e-07,45;UBERON:0003061,2.67e-07,45;UBERON:0004177,5.97e-07,29;UBERON:0005057,5.97e-07,29 | |||
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| |||
|short_description=p2@Taf4b | |||
}} |
Revision as of 13:18, 5 August 2015
Short description: | p2@Taf4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Taf4b_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENSMUST00000169862, NM_001100449, uc008edl.2_5end |
EntrezGene: | 72504 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.89e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.89e-11 | 32 |
hematopoietic stem cell | 6.89e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.89e-11 | 32 |
lymphoid lineage restricted progenitor cell | 1.76e-08 | 12 |
hematopoietic lineage restricted progenitor cell | 2.07e-08 | 25 |
mature alpha-beta T cell | 7.60e-08 | 9 |
alpha-beta T cell | 7.60e-08 | 9 |
immature T cell | 7.60e-08 | 9 |
mature T cell | 7.60e-08 | 9 |
immature alpha-beta T cell | 7.60e-08 | 9 |
T cell | 9.38e-08 | 11 |
pro-T cell | 9.38e-08 | 11 |
lymphocyte | 2.71e-07 | 13 |
common lymphoid progenitor | 2.71e-07 | 13 |
CD4-positive, alpha-beta T cell | 4.32e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.79e-07 | 48 |
immune system | 1.79e-07 | 48 |
hematopoietic system | 2.67e-07 | 45 |
blood island | 2.67e-07 | 45 |
hemopoietic organ | 5.97e-07 | 29 |
immune organ | 5.97e-07 | 29 |