FFCP PHASE1:Mm9::chr15:80085393..80085430,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:80085393..80085430,-|id=chr15:80085393..80085430,-|ontology_enrichment_celltype=CL:0000034!4.89e-08!97;CL:0000144!6.28e-08!121;CL:0000012!6.28e-08!121;CL:0000838!9.11e-08!12;CL:0000723!1.04e-07!91;CL:0000048!1.04e-07!91;CL:0000084!3.73e-07!11;CL:0000827!3.73e-07!11;CL:0002371!7.93e-07!118;CL:0000063!9.88e-07!66|ontology_enrichment_celltype_v019_2=CL:0000034,4.64e-13,97;CL:0000723,2.63e-12,91;CL:0000048,2.63e-12,91;CL:0000838,6.35e-10,12;CL:0000988,9.60e-10,32;CL:0002032,9.60e-10,32;CL:0000037,9.60e-10,32;CL:0000837,9.60e-10,32;CL:0002320,2.60e-09,46;CL:0000134,2.60e-09,46;CL:0000084,4.22e-09,11;CL:0000827,4.22e-09,11;CL:0000542,8.69e-09,13;CL:0000051,8.69e-09,13;CL:0000791,4.61e-08,9;CL:0000789,4.61e-08,9;CL:0002420,4.61e-08,9;CL:0002419,4.61e-08,9;CL:0000790,4.61e-08,9;CL:0000624,2.28e-07,8;CL:0002563,6.66e-07,9;CL:0002251,6.66e-07,9;CL:0000219,6.90e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.60e-09,46;UBERON:0000485,8.31e-08,11;UBERON:0003350,6.66e-07,9;UBERON:0004808,6.66e-07,9;UBERON:0001277,6.66e-07,9|phase1_expression=3.68342348341026,5.23463111459042,5.45999087267443,4.23449895829562,5.00895729946347,2.68606835059024,4.43864017131499,10.975482492534,9.01047821770667,6.31974221069382,3.76679530096111,2.39316476986009,8.56003649656029,9.9659258757657,0,0.809901069559304,0,1.73504190947031,0.959801035240171,1.69755860719212,0.765389611359628,2.48227378002213,2.87319768052829,0.639969691173627,1.14704640533585,3.44539178469012,1.7230479846363,1.50829862880122,1.14014051673824,1.00812051903972,1.10865255327652,9.52546010189447,9.84103660135312,0,4.04392267651784,1.16364251750945,5.3084032628216,28.0416192593728,14.8453715459522,28.2702821745851,112.352214213924,33.4692287629638,22.3334762394331,1.76255545165808,1.62203089951223,2.56965453026354,0.782391344348039,0.436050312760893,0.878744730937887,1.1665793944457,0.839918529752175,0,8.22134769682908,2.90144856804538,4.7053131879945,0,0.573066879877513,0,0.809265843438391,1.5869729378161,1.90149421051854,0.677689064138264,1.77858959222228,0,2.96659908770092,0,0.299600110518405,0.384218305321555,0.103689612308478,0.810035629990144,0.841299845405528,0.285650984403804,0.883474163806454,0.489963196859816,0.670918297127655,0.919218786610021,2.20231761998777,0.383062014255563,0.46081959976873,1.31886287730194,1.46380229763855,1.56274011167028,1.3959149950069,1.68828783009504,1.5279824777681,0.294628585473668,0.284743361598206,1.1183966749518,0.37863096666592,0.0755715601067855,4.05810284182349,0,4.0798280022465,0,0,0.448026887097336,0.280888840263504,1.36344258062446,1.29893002301434,3.5333957451034,1.54927761754349,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.34255163915718,2.33044095282455,0.593768556259299,0.520455980298408,0.608930956624282,1.15307748628029,0.753613202763113,0.117588707135705,0.628332956648377,0.494389935468748,0.433798070759735,0,0.323533699894818,0.220841518460394,0.484875253135222,3.72783522436244,1.75668478206928,0.83778682725382,0,8.02761334189666,4.19931911695385,8.13249453267614,1.19832511523858,0,2.1361239859187,1.56441888173049,1.53429274398198,1.45451631191692,0.811206315338788,0.203678727700633,1.49288364732112,1.76905930903572,1.47309299120532,0.650602214813519,0.919608417733892,0.360124259610698,1.05493372485001,0.95251098811859,0.896796041993948,1.21812241927647,0.517406741478031,0,0.189106080167819,0.879755620819744,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,0.199034266818493,7.72434506044558,7.72043721344146,5.39910648851626,0,0,0.540186184383045,0.473489471170421,0.590292695242212,0.154267112887378,0.465067889500816,0,0.700592054203017,0.658239399653922,0,0.162137619091711,0.438599962275997,0.219550115291051,0.671032093801859,0.841159794256509,1.3377599609307,0.330418782983798,1.05780226665418,0,0.232236671860439,1.03093969057675,0,0.889512175379481,0.570676878337677,0,0.658795818896044,0.251335208800269,0.198956472041151,0.974820435595601,0.898819408654221,0.432276099749388,0.398282546508734,0.758671603812327,0.456994050438915,0,1.4255592949172,0.387904974335251,0.561086559122548,0.505892296994058,0.885660887877613,0.470996183524124,0.616985819609003,0.296452627087149,1.83529616287703,0.196558995113203,1.34917267430912,1.42002084971952,0.964708639009667,1.01850340712568,1.15078454980324,0.810676133875177,0.823684239564244,2.87536413054709,0,0.936113019343682,0.757736633841335,0.179397413521912,2.8946611281802,0.369506380333209,0,0.162964976442026,0.339490171550376,0,0,0.714130922658041,0.390267295715598,0.315270288212382,0.664394068946325,0.478364305972461,0.491589944147214,1.20879487306127,0.144649058581512,1.50791283939272,0,0.491764273019036,0.551873492609465,0.963303539926752,1.17211686592203,0.655739781506702,0.757412781613119,0.315508219416257,1.952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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:80085393..80085430,- | |||
|description=CAGE_peak_at_chr15:80085393..80085430,- | |||
|id=chr15:80085393..80085430,- | |||
|ontology_enrichment_celltype=CL:0000034!4.89e-08!97;CL:0000144!6.28e-08!121;CL:0000012!6.28e-08!121;CL:0000838!9.11e-08!12;CL:0000723!1.04e-07!91;CL:0000048!1.04e-07!91;CL:0000084!3.73e-07!11;CL:0000827!3.73e-07!11;CL:0002371!7.93e-07!118;CL:0000063!9.88e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,4.64e-13,97;CL:0000723,2.63e-12,91;CL:0000048,2.63e-12,91;CL:0000838,6.35e-10,12;CL:0000988,9.60e-10,32;CL:0002032,9.60e-10,32;CL:0000037,9.60e-10,32;CL:0000837,9.60e-10,32;CL:0002320,2.60e-09,46;CL:0000134,2.60e-09,46;CL:0000084,4.22e-09,11;CL:0000827,4.22e-09,11;CL:0000542,8.69e-09,13;CL:0000051,8.69e-09,13;CL:0000791,4.61e-08,9;CL:0000789,4.61e-08,9;CL:0002420,4.61e-08,9;CL:0002419,4.61e-08,9;CL:0000790,4.61e-08,9;CL:0000624,2.28e-07,8;CL:0002563,6.66e-07,9;CL:0002251,6.66e-07,9;CL:0000219,6.90e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.60e-09,46;UBERON:0000485,8.31e-08,11;UBERON:0003350,6.66e-07,9;UBERON:0004808,6.66e-07,9;UBERON:0001277,6.66e-07,9 | |||
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| |||
|short_description=p@chr15:80085393..80085430,- | |||
}} |
Latest revision as of 16:03, 5 August 2015
Short description: | p@chr15:80085393..80085430, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:80085393..80085430, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 4.64e-13 | 97 |
somatic stem cell | 2.63e-12 | 91 |
multi fate stem cell | 2.63e-12 | 91 |
lymphoid lineage restricted progenitor cell | 6.35e-10 | 12 |
hematopoietic cell | 9.60e-10 | 32 |
hematopoietic oligopotent progenitor cell | 9.60e-10 | 32 |
hematopoietic stem cell | 9.60e-10 | 32 |
hematopoietic multipotent progenitor cell | 9.60e-10 | 32 |
connective tissue cell | 2.60e-09 | 46 |
mesenchymal cell | 2.60e-09 | 46 |
T cell | 4.22e-09 | 11 |
pro-T cell | 4.22e-09 | 11 |
lymphocyte | 8.69e-09 | 13 |
common lymphoid progenitor | 8.69e-09 | 13 |
mature alpha-beta T cell | 4.61e-08 | 9 |
alpha-beta T cell | 4.61e-08 | 9 |
immature T cell | 4.61e-08 | 9 |
mature T cell | 4.61e-08 | 9 |
immature alpha-beta T cell | 4.61e-08 | 9 |
CD4-positive, alpha-beta T cell | 2.28e-07 | 8 |
intestinal epithelial cell | 6.66e-07 | 9 |
epithelial cell of alimentary canal | 6.66e-07 | 9 |
motile cell | 6.90e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.60e-09 | 46 |
simple columnar epithelium | 8.31e-08 | 11 |
epithelium of mucosa | 6.66e-07 | 9 |
gastrointestinal system epithelium | 6.66e-07 | 9 |
intestinal epithelium | 6.66e-07 | 9 |