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FFCP PHASE1:Mm9::chr15:81230210..81230221,-: Difference between revisions

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{{FFCP|EntrezGene=70356|HGNC=|MCL_coexpression_id=376|UniProt=Q99L47|association_with_transcript=-86bp_to_NM_133726,uc007wwl.1_5end|description=CAGE_peak_5_at_St13_5end|id=chr15:81230210..81230221,-|ontology_enrichment_celltype=CL:0000117!2.05e-13!23;CL:0000337!2.05e-13!23;CL:0000540!9.34e-09!33;CL:0000047!9.34e-09!33;CL:0000031!9.34e-09!33;CL:0000404!9.34e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-14,23;CL:0000337,1.35e-14,23;CL:0000540,3.43e-09,33;CL:0000047,3.43e-09,33;CL:0000031,3.43e-09,33;CL:0000404,3.43e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.57e-20!94;UBERON:0007811!3.80e-18!86;UBERON:0000033!9.48e-18!63;UBERON:0001049!4.30e-16!52;UBERON:0005068!4.30e-16!52;UBERON:0006241!4.30e-16!52;UBERON:0007135!4.30e-16!52;UBERON:0002346!5.98e-15!71;UBERON:0003075!5.98e-15!71;UBERON:0007284!5.98e-15!71;UBERON:0000955!5.98e-15!50;UBERON:0006238!5.98e-15!50;UBERON:0003056!8.48e-15!49;UBERON:0001017!1.64e-14!73;UBERON:0005743!1.64e-14!73;UBERON:0002616!2.21e-14!49;UBERON:0000073!4.65e-14!75;UBERON:0001016!4.65e-14!75;UBERON:0004121!8.87e-14!102;UBERON:0000924!8.87e-14!102;UBERON:0006601!8.87e-14!102;UBERON:0003080!9.22e-12!40;UBERON:0002020!1.69e-11!34;UBERON:0002780!2.30e-11!39;UBERON:0001890!2.30e-11!39;UBERON:0006240!2.30e-11!39;UBERON:0002791!7.06e-09!29;UBERON:0003528!7.06e-09!29;UBERON:0001893!7.06e-09!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.42e-18,54;UBERON:0002346,4.36e-18,64;UBERON:0003075,4.36e-18,64;UBERON:0007284,4.36e-18,64;UBERON:0001049,3.83e-17,52;UBERON:0005068,3.83e-17,52;UBERON:0006241,3.83e-17,52;UBERON:0007135,3.83e-17,52;UBERON:0010371,1.45e-16,73;UBERON:0004121,4.21e-16,95;UBERON:0000924,4.21e-16,95;UBERON:0006601,4.21e-16,95;UBERON:0001017,7.73e-16,73;UBERON:0003056,1.00e-15,49;UBERON:0001016,3.37e-15,75;UBERON:0000955,4.43e-14,47;UBERON:0006238,4.43e-14,47;UBERON:0002616,1.76e-13,46;UBERON:0010314,2.71e-13,92;UBERON:0002020,8.02e-13,34;UBERON:0003080,1.00e-12,40;UBERON:0002780,2.73e-12,39;UBERON:0001890,2.73e-12,39;UBERON:0006240,2.73e-12,39;UBERON:0003528,6.44e-10,29;UBERON:0002791,6.44e-10,29;UBERON:0001893,6.44e-10,29|phase1_expression=2.24208385946712,0,0,0,0,0.33575854382378,0,2.06597317506522,0.422366166455,0.70219357896598,2.05461561870606,1.27635454392538,1.71200729931206,1.66098764596095,0,0.404950534779652,0,0.473193248037357,0.411343300817216,0.84877930359606,3.48677489619386,0.397163804803541,0.261199789138935,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,1.32987716286794,0.816677425049476,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0.251793635951155,0.304130793658544,0.917733760808408,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0.279972843250725,2.87505128729943,0.335565212115473,1.45072428402269,0.336093799142464,0.257259436035947,0,0,4.04632921719196,3.70293685490423,3.1691570175309,0.338844532069132,0,0.449949858640699,0,0.7104801149461,0,0,7.36196247390191,6.34527910158946,8.41299845405528,4.85606673486466,4.8591079009355,6.49201235839256,5.55903731905771,1.83843757322004,3.30347642998166,5.36286819957788,5.83704826373725,5.40733779693795,5.12330804173494,5.2091337055676,4.18774498502071,2.25105044012672,3.51435969886663,5.00868595305235,3.84403538157578,3.91438836233131,0.605809546665472,1.28471652181535,0,0.860423876981386,0,0,0,0,0.983110940922263,0.511290967734173,1.03914401841148,1.06001872353102,2.67602497575693,0,2.54805239706646,0,0.649473123033642,0,0,0.45673551887624,0.517875767294343,0.890652834388949,1.21439728736295,1.21786191324856,1.15307748628029,0.301445281105245,0.470354828542819,0.502666365318702,0.741584903203122,0.433798070759735,1.76922110389975,1.61766849947409,1.98757366614354,0.969750506270444,0,3.22058876712702,4.81727425670947,0.510914110417183,0.599075622529601,0,0.508280908292259,3.14560342750128,2.28750301409313,5.78010019719176,1.91206752211504,2.04572365864264,4.1557608911912,4.54275536589721,1.42575109390443,0.622034853050465,0.758168275301024,0.841767423545896,3.12289063110489,3.44853156650209,5.04173963454978,3.31550599238573,2.99360596265843,2.8185018462667,4.68508622798644,2.32833033665114,4.74249584452253,4.72765200419548,2.81521798662318,3.06874025398605,2.22437799380478,1.74126083261083,1.85203922767149,2.18937693500343,0,0.772043721344145,0.284163499395593,2.27838349789052,1.17263029990548,1.2604344302271,1.42046841351126,0.787056926989615,1.07986979021165,0.930135779001631,1.3413670069981,1.86824547787471,1.48103864922132,1.31333971263276,1.70244500046297,1.46199987425332,0.878200461164203,2.41571553768669,3.15434922846191,6.5858951922742,0.330418782983798,0.264450566663544,3.62590025909898,2.55460339046482,1.80414445850931,0.201683524623343,1.11189021922435,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0,0.94833950476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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:70356
|HGNC=
|MCL_coexpression_id=376
|TSSclassifier=NA
|UniProt=uniprot:Q99L47
|association_with_transcript=-86bp_to_NM_133726,uc007wwl.1_5end
|cluster_id=chr15:81230210..81230221,-
|description=CAGE_peak_5_at_St13_5end
|id=chr15:81230210..81230221,-
|ontology_enrichment_celltype=CL:0000117!2.05e-13!23;CL:0000337!2.05e-13!23;CL:0000540!9.34e-09!33;CL:0000047!9.34e-09!33;CL:0000031!9.34e-09!33;CL:0000404!9.34e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.35e-14,23;CL:0000337,1.35e-14,23;CL:0000540,3.43e-09,33;CL:0000047,3.43e-09,33;CL:0000031,3.43e-09,33;CL:0000404,3.43e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!3.57e-20!94;UBERON:0007811!3.80e-18!86;UBERON:0000033!9.48e-18!63;UBERON:0001049!4.30e-16!52;UBERON:0005068!4.30e-16!52;UBERON:0006241!4.30e-16!52;UBERON:0007135!4.30e-16!52;UBERON:0002346!5.98e-15!71;UBERON:0003075!5.98e-15!71;UBERON:0007284!5.98e-15!71;UBERON:0000955!5.98e-15!50;UBERON:0006238!5.98e-15!50;UBERON:0003056!8.48e-15!49;UBERON:0001017!1.64e-14!73;UBERON:0005743!1.64e-14!73;UBERON:0002616!2.21e-14!49;UBERON:0000073!4.65e-14!75;UBERON:0001016!4.65e-14!75;UBERON:0004121!8.87e-14!102;UBERON:0000924!8.87e-14!102;UBERON:0006601!8.87e-14!102;UBERON:0003080!9.22e-12!40;UBERON:0002020!1.69e-11!34;UBERON:0002780!2.30e-11!39;UBERON:0001890!2.30e-11!39;UBERON:0006240!2.30e-11!39;UBERON:0002791!7.06e-09!29;UBERON:0003528!7.06e-09!29;UBERON:0001893!7.06e-09!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.42e-18,54;UBERON:0002346,4.36e-18,64;UBERON:0003075,4.36e-18,64;UBERON:0007284,4.36e-18,64;UBERON:0001049,3.83e-17,52;UBERON:0005068,3.83e-17,52;UBERON:0006241,3.83e-17,52;UBERON:0007135,3.83e-17,52;UBERON:0010371,1.45e-16,73;UBERON:0004121,4.21e-16,95;UBERON:0000924,4.21e-16,95;UBERON:0006601,4.21e-16,95;UBERON:0001017,7.73e-16,73;UBERON:0003056,1.00e-15,49;UBERON:0001016,3.37e-15,75;UBERON:0000955,4.43e-14,47;UBERON:0006238,4.43e-14,47;UBERON:0002616,1.76e-13,46;UBERON:0010314,2.71e-13,92;UBERON:0002020,8.02e-13,34;UBERON:0003080,1.00e-12,40;UBERON:0002780,2.73e-12,39;UBERON:0001890,2.73e-12,39;UBERON:0006240,2.73e-12,39;UBERON:0003528,6.44e-10,29;UBERON:0002791,6.44e-10,29;UBERON:0001893,6.44e-10,29
|phase1_expression=2.24208385946712,0,0,0,0,0.33575854382378,0,2.06597317506522,0.422366166455,0.70219357896598,2.05461561870606,1.27635454392538,1.71200729931206,1.66098764596095,0,0.404950534779652,0,0.473193248037357,0.411343300817216,0.84877930359606,3.48677489619386,0.397163804803541,0.261199789138935,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,1.32987716286794,0.816677425049476,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0.251793635951155,0.304130793658544,0.917733760808408,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0.279972843250725,2.87505128729943,0.335565212115473,1.45072428402269,0.336093799142464,0.257259436035947,0,0,4.04632921719196,3.70293685490423,3.1691570175309,0.338844532069132,0,0.449949858640699,0,0.7104801149461,0,0,7.36196247390191,6.34527910158946,8.41299845405528,4.85606673486466,4.8591079009355,6.49201235839256,5.55903731905771,1.83843757322004,3.30347642998166,5.36286819957788,5.83704826373725,5.40733779693795,5.12330804173494,5.2091337055676,4.18774498502071,2.25105044012672,3.51435969886663,5.00868595305235,3.84403538157578,3.91438836233131,0.605809546665472,1.28471652181535,0,0.860423876981386,0,0,0,0,0.983110940922263,0.511290967734173,1.03914401841148,1.06001872353102,2.67602497575693,0,2.54805239706646,0,0.649473123033642,0,0,0.45673551887624,0.517875767294343,0.890652834388949,1.21439728736295,1.21786191324856,1.15307748628029,0.301445281105245,0.470354828542819,0.502666365318702,0.741584903203122,0.433798070759735,1.76922110389975,1.61766849947409,1.98757366614354,0.969750506270444,0,3.22058876712702,4.81727425670947,0.510914110417183,0.599075622529601,0,0.508280908292259,3.14560342750128,2.28750301409313,5.78010019719176,1.91206752211504,2.04572365864264,4.1557608911912,4.54275536589721,1.42575109390443,0.622034853050465,0.758168275301024,0.841767423545896,3.12289063110489,3.44853156650209,5.04173963454978,3.31550599238573,2.99360596265843,2.8185018462667,4.68508622798644,2.32833033665114,4.74249584452253,4.72765200419548,2.81521798662318,3.06874025398605,2.22437799380478,1.74126083261083,1.85203922767149,2.18937693500343,0,0.772043721344145,0.284163499395593,2.27838349789052,1.17263029990548,1.2604344302271,1.42046841351126,0.787056926989615,1.07986979021165,0.930135779001631,1.3413670069981,1.86824547787471,1.48103864922132,1.31333971263276,1.70244500046297,1.46199987425332,0.878200461164203,2.41571553768669,3.15434922846191,6.5858951922742,0.330418782983798,0.264450566663544,3.62590025909898,2.55460339046482,1.80414445850931,0.201683524623343,1.11189021922435,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0,0.948339504765408,2.28497025219458,0,2.44381593414377,2.13347735884388,1.26244475802573,2.21327879934901,1.18088118383682,0.941992367048249,0.987177311374404,0.592905254174298,1.00107063429656,0.393117990226406,0,0.405720242777006,0,0.25462585178142,0.575392274901621,0.162135226775035,0.823684239564244,0,0,0.624075346229121,0.757736633841335,0.538192240565737,0.482443521363367,0.554259570499814,2.08440552947533,1.14075483509418,1.18821560042632,1.64283173801951,1.00503754465089,1.19021820443007,0.975668239288994,1.26108115284953,1.32878813789265,1.43509291791738,0.983179888294428,1.55416483679306,0.723245292907558,0,0,1.47529281905711,0.551873492609465,3.53211297973142,6.09500770279457,1.14754461763673,2.7771801992481,0.94652465824877,0,0.646270193198397,0,1.11399337041197,1.13230612315533,1.21443210502468,0.876767573733936,1.58115111178609,4.81981974632711,0.425820255624806,1.06839362200353,1.30309567482861,0.824850614862677,0,1.94224508923985,0.302323556964751,1.32023555829129,0.590603785761546,0.614870295887855,0.516856586336442,1.09060118843252,1.06949213515416,0,0,2.06271086496374,2.38307724027652,3.24109969256358,1.94038025674132,3.85806663056866,1.77340233642274,2.14042581122485,2.96188237083818,0.913394847343798,0.704015124191131,0.21183207086382,0.661585194164886,1.31909002353184,1.13025098687134,1.68876189798836,0.716234064018819,0.656563598980245,0.291480836629851,5.56275906031529,0.683483523191411,2.47664241555867,0.925972636848558,0.941842285023455,0.410082683163076,1.14389086603261,0.849892149969277,0.559805809294632,1.24379976423981,0,2.37251995185852,1.21991680276109,1.51207477150522,0.627264888043406,0.436725127492355,0.674321731924103,0.661227645802687,0.523511883968059,0.129614973291793,0,18.6018669765783,1.49516546043979,1.98550188548517,0.777804753376191,1.42075805825504,1.01373675294467,0.704143431874524,0.781226309063701,1.25831213310853,5.31485065817213,12.9613502816039,1.89606672376907,3.44632865993279,2.05421914329655,1.29920822977795,1.61124026100733,3.17890167650024,1.80293174279953,1.47689527174577,2.01932899896295,1.905170166375,2.62148081355785,2.33898913775406,2.50150788264857,1.28564592399726,1.58711268530648,0.443971906748129,0.358855426437903,1.34307693091263,1.35232715822533,0.375364950902364,0.915758121336325,0.214368379079066,0.501572104035363,2.82375921308533,4.60325236507177,2.29158205375759,2.23409137046794,3.42541259885321,1.5107877947794,3.37511250115903,1.80128481289688,1.35942722695261,1.03552062350364,4.4628559461196,2.79317411380722,1.53660245178721,1.70174701947806,2.30574478890781,3.30918315210025,2.44471400581777,1.23621034343337,2.24643446714271,3.28506375292937,0.760437899670719,2.82939512079114,2.99652823903624,2.30490548657529,2.75690250986944,2.85776214769844,2.31768651889711,1.92909220463705,2.06042950401653,1.17759136107518,2.40008476669791,2.66213709239006,3.81497903915713,2.76158191601424,2.35273451038327,2.70766745253365,2.37806364734604,2.10455769150274,1.90125759384206,0.561142271657738,1.54225523561426,2.9551344712669,1.22769312950907,1.70430525304563,1.92906610981141,2.24829520144151,1.87145286756327,0.429742108096597,0.765153328275374,1.10295709559758,1.15933917810211
|short_description=p5@St13
}}

Revision as of 16:32, 5 August 2015

Short description:p5@St13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_St13_5end
Coexpression cluster:MCL_coexpression_mm9:376
Association with transcript: -86bp_to_NM_133726, uc007wwl.1_5end
EntrezGene:70356
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@St13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G84.69
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A36.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G518.60
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E212.96
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E42.62
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I84.46
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.35e-1423
neuroblast (sensu Vertebrata)1.35e-1423
neuron3.43e-0933
neuronal stem cell3.43e-0933
neuroblast3.43e-0933
electrically signaling cell3.43e-0933

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.42e-1854
neurectoderm4.36e-1864
neural plate4.36e-1864
presumptive neural plate4.36e-1864
neural tube3.83e-1752
neural rod3.83e-1752
future spinal cord3.83e-1752
neural keel3.83e-1752
ecto-epithelium1.45e-1673
ectoderm-derived structure4.21e-1695
ectoderm4.21e-1695
presumptive ectoderm4.21e-1695
central nervous system7.73e-1673
pre-chordal neural plate1.00e-1549
nervous system3.37e-1575
brain4.43e-1447
future brain4.43e-1447
regional part of brain1.76e-1346
structure with developmental contribution from neural crest2.71e-1392
gray matter8.02e-1334
anterior neural tube1.00e-1240
regional part of forebrain2.73e-1239
forebrain2.73e-1239
future forebrain2.73e-1239
brain grey matter6.44e-1029
regional part of telencephalon6.44e-1029
telencephalon6.44e-1029
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