FFCP PHASE1:Mm9::chr7:90893343..90893363,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=230|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:90893343..90893363,-|id=chr7:90893343..90893363,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,2.22e-18,3;CL:0000359,2.22e-18,3;CL:0002539,2.22e-18,3;CL:0000514,2.22e-18,3;CL:0000222,2.07e-13,7;CL:0000680,1.85e-09,6;CL:0000187,1.85e-09,6;CL:0000056,1.85e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!6.74e-07!5;UBERON:0001981!6.74e-07!5;UBERON:0002049!6.74e-07!5;UBERON:0007500!6.74e-07!5;UBERON:0007798!6.74e-07!5;UBERON:0004537!6.74e-07!5;UBERON:0006965!6.74e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.46e-28,5;UBERON:0007500,2.46e-28,5;UBERON:0001981,2.46e-28,5;UBERON:0002049,2.46e-28,5;UBERON:0007798,2.46e-28,5;UBERON:0004537,2.46e-28,5;UBERON:0006965,2.46e-28,5;UBERON:0000947,1.97e-23,4;UBERON:0001637,1.97e-23,4;UBERON:0004573,1.97e-23,4;UBERON:0003509,1.97e-23,4;UBERON:0004571,1.97e-23,4;UBERON:0010191,1.97e-23,4;UBERON:0004572,1.97e-23,4;UBERON:0001135,2.22e-18,3;UBERON:0004237,2.22e-18,3;UBERON:0004695,2.22e-18,3;UBERON:0002111,2.22e-18,3;UBERON:0004178,2.22e-18,3;UBERON:0000474,1.28e-15,9;UBERON:0003100,9.06e-13,11;UBERON:0003134,1.53e-11,8;UBERON:0003975,1.02e-10,5;UBERON:0004535,1.86e-08,23;UBERON:0001009,1.86e-08,23;UBERON:0000993,6.09e-07,1;UBERON:0006834,6.93e-07,1;UBERON:0000996,7.89e-07,1;UBERON:0001723,8.98e-07,1;UBERON:0001033,8.98e-07,1;UBERON:0010056,8.98e-07,1|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.7729749659703,18.8561092068297,23.6775310288569,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0,1.15945795480671,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,1.44599356919912,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0.187403449119458,0.517406741478031,0,0,0,0.43839146485515,0.278047249225598,1.0447564995665,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.730999937126662,1.3173006917463,0.268412837520744,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,2.95605104266567,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,1.3109065177259,0.518054945597687,0.723245292907558,0,0,0,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,2.6968616189571,0.178065603667255,0.162886959353576,2.47455184458803,0,0,0.302323556964751,0,0.295301892880773,0,0,0,1.06949213515416,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.161464426695906,0.120625849856312,0.358117032009409,0.656563598980245,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,1.81384306892169,0,0,0,0.579568782096571,2.064507229963,2.74727436400898,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0,0,0.342869252385415,0,0,0,0.376437521661322,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p@chr7:90893343..90893363,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=230 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:90893343..90893363,- | |||
|description=CAGE_peak_at_chr7:90893343..90893363,- | |||
|id=chr7:90893343..90893363,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.22e-18,3;CL:0000359,2.22e-18,3;CL:0002539,2.22e-18,3;CL:0000514,2.22e-18,3;CL:0000222,2.07e-13,7;CL:0000680,1.85e-09,6;CL:0000187,1.85e-09,6;CL:0000056,1.85e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.74e-07!5;UBERON:0001981!6.74e-07!5;UBERON:0002049!6.74e-07!5;UBERON:0007500!6.74e-07!5;UBERON:0007798!6.74e-07!5;UBERON:0004537!6.74e-07!5;UBERON:0006965!6.74e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.46e-28,5;UBERON:0007500,2.46e-28,5;UBERON:0001981,2.46e-28,5;UBERON:0002049,2.46e-28,5;UBERON:0007798,2.46e-28,5;UBERON:0004537,2.46e-28,5;UBERON:0006965,2.46e-28,5;UBERON:0000947,1.97e-23,4;UBERON:0001637,1.97e-23,4;UBERON:0004573,1.97e-23,4;UBERON:0003509,1.97e-23,4;UBERON:0004571,1.97e-23,4;UBERON:0010191,1.97e-23,4;UBERON:0004572,1.97e-23,4;UBERON:0001135,2.22e-18,3;UBERON:0004237,2.22e-18,3;UBERON:0004695,2.22e-18,3;UBERON:0002111,2.22e-18,3;UBERON:0004178,2.22e-18,3;UBERON:0000474,1.28e-15,9;UBERON:0003100,9.06e-13,11;UBERON:0003134,1.53e-11,8;UBERON:0003975,1.02e-10,5;UBERON:0004535,1.86e-08,23;UBERON:0001009,1.86e-08,23;UBERON:0000993,6.09e-07,1;UBERON:0006834,6.93e-07,1;UBERON:0000996,7.89e-07,1;UBERON:0001723,8.98e-07,1;UBERON:0001033,8.98e-07,1;UBERON:0010056,8.98e-07,1 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.7729749659703,18.8561092068297,23.6775310288569,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0,1.15945795480671,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,1.44599356919912,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0.187403449119458,0.517406741478031,0,0,0,0.43839146485515,0.278047249225598,1.0447564995665,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.730999937126662,1.3173006917463,0.268412837520744,0.210289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,2.95605104266567,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.159454768657487,1.3109065177259,0.518054945597687,0.723245292907558,0,0,0,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,2.6968616189571,0.178065603667255,0.162886959353576,2.47455184458803,0,0,0.302323556964751,0,0.295301892880773,0,0,0,1.06949213515416,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.161464426695906,0.120625849856312,0.358117032009409,0.656563598980245,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0.241584120826006,0.288030006257865,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,1.81384306892169,0,0,0,0.579568782096571,2.064507229963,2.74727436400898,1.92931541171159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.231768651889711,0,0,0,0.342869252385415,0,0,0,0.376437521661322,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr7:90893343..90893363,- | |||
}} |
Latest revision as of 16:55, 5 August 2015
Short description: | p@chr7:90893343..90893363, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:90893343..90893363, - |
Coexpression cluster: | MCL_coexpression_mm9:230 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.22e-18 | 3 |
vascular associated smooth muscle cell | 2.22e-18 | 3 |
aortic smooth muscle cell | 2.22e-18 | 3 |
smooth muscle myoblast | 2.22e-18 | 3 |
mesodermal cell | 2.07e-13 | 7 |
muscle precursor cell | 1.85e-09 | 6 |
muscle cell | 1.85e-09 | 6 |
myoblast | 1.85e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.46e-28 | 5 |
epithelial tube open at both ends | 2.46e-28 | 5 |
blood vessel | 2.46e-28 | 5 |
vasculature | 2.46e-28 | 5 |
vascular system | 2.46e-28 | 5 |
blood vasculature | 2.46e-28 | 5 |
vascular cord | 2.46e-28 | 5 |
aorta | 1.97e-23 | 4 |
artery | 1.97e-23 | 4 |
systemic artery | 1.97e-23 | 4 |
arterial blood vessel | 1.97e-23 | 4 |
systemic arterial system | 1.97e-23 | 4 |
aortic system | 1.97e-23 | 4 |
arterial system | 1.97e-23 | 4 |
smooth muscle tissue | 2.22e-18 | 3 |
blood vessel smooth muscle | 2.22e-18 | 3 |
arterial system smooth muscle | 2.22e-18 | 3 |
artery smooth muscle tissue | 2.22e-18 | 3 |
aorta smooth muscle tissue | 2.22e-18 | 3 |
female reproductive system | 1.28e-15 | 9 |
female organism | 9.06e-13 | 11 |
female reproductive organ | 1.53e-11 | 8 |
internal female genitalia | 1.02e-10 | 5 |
cardiovascular system | 1.86e-08 | 23 |
circulatory system | 1.86e-08 | 23 |
oviduct | 6.09e-07 | 1 |
uterus or analog | 6.93e-07 | 1 |
vagina | 7.89e-07 | 1 |
tongue | 8.98e-07 | 1 |
gustatory system | 8.98e-07 | 1 |
future tongue | 8.98e-07 | 1 |