FFCP PHASE1:Mm9::chr13:24821510..24821514,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=202|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:24821510..24821514,+|id=chr13:24821510..24821514,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,2.26e-14,25;CL:0000838,5.03e-14,12;CL:0000791,3.20e-13,9;CL:0000789,3.20e-13,9;CL:0002420,3.20e-13,9;CL:0002419,3.20e-13,9;CL:0000790,3.20e-13,9;CL:0000542,6.52e-13,13;CL:0000051,6.52e-13,13;CL:0000988,5.90e-11,32;CL:0002032,5.90e-11,32;CL:0000037,5.90e-11,32;CL:0000837,5.90e-11,32;CL:0000084,8.62e-11,11;CL:0000827,8.62e-11,11;CL:0000624,6.75e-10,8;CL:0000738,9.15e-10,17;CL:0002087,9.15e-10,17;CL:0000553,8.85e-08,6;CL:0000556,8.85e-08,6;CL:0002320,3.11e-07,46;CL:0000134,3.11e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,8.97e-07,3;DOID:4045,8.97e-07,3|ontology_enrichment_uberon=UBERON:0002390!9.78e-07!45;UBERON:0003061!9.78e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.13e-10,48;UBERON:0002405,2.13e-10,48;UBERON:0002390,3.43e-09,45;UBERON:0003061,3.43e-09,45;UBERON:0002106,8.85e-08,6;UBERON:0004457,8.85e-08,6;UBERON:0000042,8.85e-08,6;UBERON:0004854,8.85e-08,6;UBERON:0009034,8.85e-08,6;UBERON:0002095,8.85e-08,6;UBERON:0004782,8.85e-08,6;UBERON:0003281,8.85e-08,6;UBERON:0009664,8.85e-08,6;UBERON:0002296,8.85e-08,6;UBERON:0005602,8.85e-08,6;UBERON:0001179,8.85e-08,6;UBERON:0006293,8.85e-08,6;UBERON:0004177,2.33e-07,29;UBERON:0005057,2.33e-07,29;UBERON:0002384,3.11e-07,46|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0,0,0,0.0797721589953364,2.73921167889929,2.09808965805594,0.333109761815663,0.809901069559304,0.699561878128147,1.26184866143295,3.97631857456642,1.69755860719212,0.17008658030214,0.893618560807968,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,1.25559489221072,0.7813353445238,1.0470474879476,1.76469446409304,0.683045484958446,0.971020706062307,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0.194429899074283,0,0,2.01339127269284,2.17608642603403,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0.919218786610021,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,0.11981512450592,0,0.254140454146129,0.149790639404823,0,0.628271760564322,0.173824320192276,0.255715457330331,0,0.162241263067758,0.203678727700633,0.373220911830279,0.252722758433675,0,0,0,0,0.452114453507145,0.272145996605311,0.512454881139399,0.562210347358373,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.329119699826961,0.32833492815819,0.324275238183423,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.81931657357869,1.20879487306127,0.578596234326046,0,0,0.491764273019036,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0.680879211507576,0,0,0.428674070063185,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0.322928853391811,0.180938774784468,0,0,0,0.18542530201051,1.53783792718067,0,0.185194527369712,0.565105371014073,2.46049609897845,1.60144721244566,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0,0.58678619322877,0.13020438484395,0.104859344425711,0,0.288030006257865,0.632022241256357,0.608175645870493,0.308132871494482,0.51968329191118,0,0.198681354781265,0.841368146639782,0.443068581523732,0.302899349844443,0.457240839929999,1.20991422164209,0.682205165178267,0.769694733122636,1.28564592399726,0,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0.214368379079066,0,0.564751842617067,0,0,0.859265911718438,0,0,0,0,0,0.51776031175182,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0,0.25384382367503,0.182927972872773,0,0,0,0,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.429742108096597,0.191288332068843,0,0|short_description=p@chr13:24821510..24821514,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=202 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:24821510..24821514,+ | |||
|description=CAGE_peak_at_chr13:24821510..24821514,+ | |||
|id=chr13:24821510..24821514,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.26e-14,25;CL:0000838,5.03e-14,12;CL:0000791,3.20e-13,9;CL:0000789,3.20e-13,9;CL:0002420,3.20e-13,9;CL:0002419,3.20e-13,9;CL:0000790,3.20e-13,9;CL:0000542,6.52e-13,13;CL:0000051,6.52e-13,13;CL:0000988,5.90e-11,32;CL:0002032,5.90e-11,32;CL:0000037,5.90e-11,32;CL:0000837,5.90e-11,32;CL:0000084,8.62e-11,11;CL:0000827,8.62e-11,11;CL:0000624,6.75e-10,8;CL:0000738,9.15e-10,17;CL:0002087,9.15e-10,17;CL:0000553,8.85e-08,6;CL:0000556,8.85e-08,6;CL:0002320,3.11e-07,46;CL:0000134,3.11e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.97e-07,3;DOID:4045,8.97e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.78e-07!45;UBERON:0003061!9.78e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.13e-10,48;UBERON:0002405,2.13e-10,48;UBERON:0002390,3.43e-09,45;UBERON:0003061,3.43e-09,45;UBERON:0002106,8.85e-08,6;UBERON:0004457,8.85e-08,6;UBERON:0000042,8.85e-08,6;UBERON:0004854,8.85e-08,6;UBERON:0009034,8.85e-08,6;UBERON:0002095,8.85e-08,6;UBERON:0004782,8.85e-08,6;UBERON:0003281,8.85e-08,6;UBERON:0009664,8.85e-08,6;UBERON:0002296,8.85e-08,6;UBERON:0005602,8.85e-08,6;UBERON:0001179,8.85e-08,6;UBERON:0006293,8.85e-08,6;UBERON:0004177,2.33e-07,29;UBERON:0005057,2.33e-07,29;UBERON:0002384,3.11e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0,0,0,0.0797721589953364,2.73921167889929,2.09808965805594,0.333109761815663,0.809901069559304,0.699561878128147,1.26184866143295,3.97631857456642,1.69755860719212,0.17008658030214,0.893618560807968,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,1.25559489221072,0.7813353445238,1.0470474879476,1.76469446409304,0.683045484958446,0.971020706062307,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0.194429899074283,0,0,2.01339127269284,2.17608642603403,1.34437519656986,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0.919218786610021,0,0.127687338085188,0,0.263772575460388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,1.55362730188303,0,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,0.11981512450592,0,0.254140454146129,0.149790639404823,0,0.628271760564322,0.173824320192276,0.255715457330331,0,0.162241263067758,0.203678727700633,0.373220911830279,0.252722758433675,0,0,0,0,0.452114453507145,0.272145996605311,0.512454881139399,0.562210347358373,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.329119699826961,0.32833492815819,0.324275238183423,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0,0.554259570499814,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.81931657357869,1.20879487306127,0.578596234326046,0,0,0.491764273019036,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0.680879211507576,0,0,0.428674070063185,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0.322928853391811,0.180938774784468,0,0,0,0.18542530201051,1.53783792718067,0,0.185194527369712,0.565105371014073,2.46049609897845,1.60144721244566,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0.129159823477731,0,0.58678619322877,0.13020438484395,0.104859344425711,0,0.288030006257865,0.632022241256357,0.608175645870493,0.308132871494482,0.51968329191118,0,0.198681354781265,0.841368146639782,0.443068581523732,0.302899349844443,0.457240839929999,1.20991422164209,0.682205165178267,0.769694733122636,1.28564592399726,0,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0.214368379079066,0,0.564751842617067,0,0,0.859265911718438,0,0,0,0,0,0.51776031175182,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0,0.25384382367503,0.182927972872773,0,0,0,0,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p@chr13:24821510..24821514,+ | |||
}} |
Latest revision as of 20:11, 5 August 2015
Short description: | p@chr13:24821510..24821514, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:24821510..24821514, + |
Coexpression cluster: | MCL_coexpression_mm9:202 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.26e-14 | 25 |
lymphoid lineage restricted progenitor cell | 5.03e-14 | 12 |
mature alpha-beta T cell | 3.20e-13 | 9 |
alpha-beta T cell | 3.20e-13 | 9 |
immature T cell | 3.20e-13 | 9 |
mature T cell | 3.20e-13 | 9 |
immature alpha-beta T cell | 3.20e-13 | 9 |
lymphocyte | 6.52e-13 | 13 |
common lymphoid progenitor | 6.52e-13 | 13 |
hematopoietic cell | 5.90e-11 | 32 |
hematopoietic oligopotent progenitor cell | 5.90e-11 | 32 |
hematopoietic stem cell | 5.90e-11 | 32 |
hematopoietic multipotent progenitor cell | 5.90e-11 | 32 |
T cell | 8.62e-11 | 11 |
pro-T cell | 8.62e-11 | 11 |
CD4-positive, alpha-beta T cell | 6.75e-10 | 8 |
leukocyte | 9.15e-10 | 17 |
nongranular leukocyte | 9.15e-10 | 17 |
megakaryocyte progenitor cell | 8.85e-08 | 6 |
megakaryocyte | 8.85e-08 | 6 |
connective tissue cell | 3.11e-07 | 46 |
mesenchymal cell | 3.11e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.13e-10 | 48 |
immune system | 2.13e-10 | 48 |
hematopoietic system | 3.43e-09 | 45 |
blood island | 3.43e-09 | 45 |
spleen | 8.85e-08 | 6 |
cavity lining | 8.85e-08 | 6 |
serous membrane | 8.85e-08 | 6 |
gastrointestinal system mesentery | 8.85e-08 | 6 |
stomach region | 8.85e-08 | 6 |
mesentery | 8.85e-08 | 6 |
gastrointestinal system serosa | 8.85e-08 | 6 |
mesentery of stomach | 8.85e-08 | 6 |
gut mesentery | 8.85e-08 | 6 |
dorsal mesentery | 8.85e-08 | 6 |
dorsal mesogastrium | 8.85e-08 | 6 |
peritoneal cavity | 8.85e-08 | 6 |
spleen primordium | 8.85e-08 | 6 |
hemopoietic organ | 2.33e-07 | 29 |
immune organ | 2.33e-07 | 29 |
connective tissue | 3.11e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.97e-07 | 3 |
muscle cancer | 8.97e-07 | 3 |