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FFCP PHASE1:Mm9::chr13:29043389..29043410,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=667|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:29043389..29043410,+|id=chr13:29043389..29043410,+|ontology_enrichment_celltype=CL:0000393!3.19e-09!39;CL:0000211!3.19e-09!39;CL:0000221!1.11e-08!44;CL:0000133!1.11e-08!44;CL:0000055!1.51e-08!50;CL:0000540!2.58e-08!33;CL:0000047!2.58e-08!33;CL:0000031!2.58e-08!33;CL:0000404!2.58e-08!33;CL:0002319!3.57e-08!43;CL:0000117!1.14e-07!23;CL:0000337!1.14e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.32e-13,23;CL:0000337,3.32e-13,23;CL:0000393,2.01e-11,39;CL:0000211,2.01e-11,39;CL:0000221,2.29e-11,44;CL:0000133,2.29e-11,44;CL:0000540,8.96e-11,33;CL:0000047,8.96e-11,33;CL:0000031,8.96e-11,33;CL:0000404,8.96e-11,33;CL:0002319,1.58e-10,43;CL:0002321,4.87e-10,70;CL:0002609,6.88e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.96e-08,73;UBERON:0002020,3.12e-08,34;UBERON:0001016,8.37e-08,75;UBERON:0002346,3.22e-07,64;UBERON:0003075,3.22e-07,64;UBERON:0007284,3.22e-07,64;UBERON:0001049,6.10e-07,52;UBERON:0005068,6.10e-07,52;UBERON:0006241,6.10e-07,52;UBERON:0007135,6.10e-07,52;UBERON:0004121,7.11e-07,95;UBERON:0000924,7.11e-07,95;UBERON:0006601,7.11e-07,95|phase1_expression=0.640595388419176,0,0,0,0,0,0.467225281191051,0.129123323441576,0.563154888606667,0,0.34243593645101,0.159544317990673,0,0,0,0.202475267389826,0,0.157731082679119,0,0.42438965179803,0.0850432901510698,1.09220046320974,1.30599894569468,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0.755380907853464,1.11514624341466,6.9747765821439,0,1.09012578190223,0.219686182734472,1.1665793944457,0.419959264876088,0,0,1.45072428402269,0.336093799142464,1.54355661621568,0.85960031981627,0,2.83243045203437,6.87688273053643,6.97214543856797,0.338844532069132,1.77858959222228,0.899899717281399,0,0,3.89480143673926,1.53687322128622,6.947204024668,19.9808788730902,9.46462326081219,0.571301968807607,2.20868540951614,4.89963196859816,3.54628242767475,13.7882817991503,0,0.127687338085188,0.307213066512487,3.29715719325485,2.47016637726506,5.2091337055676,0.279182999001381,1.12552522006336,0.15279824777681,3.24091444021034,1.85083185038834,2.23679334990361,0.757261933331841,0.529000920747499,0.289864488701678,0,0,0,0,0,0.280888840263504,0.511290967734173,1.81850203222008,1.41335829804136,4.22530259330042,0,0,7.11066703153331,14.2884087067401,12.6679932737549,17.1878311305026,0.34255163915718,0,0,0.867426633830679,0.304465478312141,0.461230994512117,0.452167921657868,0.587943535678524,0.502666365318702,0,0,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,0.239630249011841,0,0.508280908292259,0,0,2.1361239859187,0,0.511430914660661,0,0.324482526135515,1.2220723662038,0.497627882440372,0,0,0.780722657776222,0.229902104433473,0.360124259610698,2.71268672104287,1.97305847538851,0.896796041993948,3.65436725782942,0.258703370739016,0.646703978798527,1.32374256117473,0.527853372491847,1.09597866213787,1.11218899690239,0,0.61734640922383,5.37392520409932,0,0,0,0.621377317606506,0.469052119962192,1.80062061461015,0.710234206755631,0.590292695242212,0.462801338662135,0.930135779001631,2.68273401399619,1.40118410840603,1.6455984991348,0.656669856316381,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0,1.02904612379284,0,0,0.853153002140936,0.928946687441754,0.515469845288373,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0.398282546508734,1.70701110857774,0.913988100877831,0,0.407302655690628,0.775809948670503,0.420814919341911,0.632365371242573,0,0.31399745568275,0.246794327843601,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,2.87536413054709,0,0.312037673114561,0,0,0,0.554259570499814,0.947457058852424,0.651859905768103,2.37643120085263,1.40814148973101,0.670025029767263,0.714130922658041,0.195133647857799,0.630540576424764,0.221464689648775,0.478364305972461,0.327726629431476,0.863424909329478,0.433947175744535,0,0,0,0.551873492609465,0.321101179975584,0.234423373184406,0.655739781506702,0.504941854408746,0,0.390438744296638,1.50796378412959,0.955875191810208,0.891194696329576,0.849229592366497,2.02405350837447,1.16902343164525,0.395287777946524,0,0.425820255624806,2.84904965867608,2.28041743095006,0.329940245945071,1.32745138339963,2.91336763385978,1.81394134178851,1.50884063804718,0.295301892880773,0.614870295887855,0.775284879504663,1.09060118843252,1.42598951353889,0.316036757935816,0,0,0.340439605753788,1.62054984628179,2.8458910432206,2.14337035031592,0,1.60531935841864,0.658196082408484,0.913394847343798,0,0.21183207086382,0,0,0,0.241251699712623,0.358117032009409,0.164140899745061,0,0.18542530201051,0.170870880797853,1.44470807574256,0.370389054739423,0,0,0,0,0,0.414599921413271,0,0.790839983952838,0.203319467126849,0.972048067396211,0.627264888043406,0.218362563746178,0.539457385539283,0.165306911450672,0.26175594198403,0.388844919875379,0,0,1.49516546043979,0.827292452285488,0.583353565032143,2.45403664607689,1.01373675294467,1.05621514781179,0.651021924219751,0.524296722128554,0.241584120826006,0,0.632022241256357,2.63542779877213,1.23253148597793,0.649604114888975,0.358053391334963,0.79472541912506,0.600977247599844,1.18151621739662,0.605798699688886,0.838274873204998,0.403304740547362,0.682205165178267,1.34696578296461,0.935015217452552,0.226730383615211,0,0,0.167884616364078,0,0.187682475451182,0.915758121336325,0,0,0.564751842617067,0,0,1.03111909406213,0,1.5107877947794,0,0,0.453142408984205,0,1.764384908931,0.399024873401031,1.19513524027894,0.243106717068294,0.838452650511929,0.367687016900028,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.384150914429216,0.287177344778066,0.476293691283074,0.463537303779422,0,1.23625770240992,0.588795680537589,0.685738504770831,0.532427418478012,0.476872379894642,0.726732083161643,0.376437521661322,0.338458431566706,1.09756783723664,1.05227884575137,0.814824683075171,0.561142271657738,0.474540072496697,0.591026894253381,0.409231043169689,0.929621047115796,0.385813221962283,0.749431733813838,0,0,0.57386499620653,0.661774257358546,0|short_description=p@chr13:29043389..29043410,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=667
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr13:29043389..29043410,+
|description=CAGE_peak_at_chr13:29043389..29043410,+
|id=chr13:29043389..29043410,+
|ontology_enrichment_celltype=CL:0000393!3.19e-09!39;CL:0000211!3.19e-09!39;CL:0000221!1.11e-08!44;CL:0000133!1.11e-08!44;CL:0000055!1.51e-08!50;CL:0000540!2.58e-08!33;CL:0000047!2.58e-08!33;CL:0000031!2.58e-08!33;CL:0000404!2.58e-08!33;CL:0002319!3.57e-08!43;CL:0000117!1.14e-07!23;CL:0000337!1.14e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.32e-13,23;CL:0000337,3.32e-13,23;CL:0000393,2.01e-11,39;CL:0000211,2.01e-11,39;CL:0000221,2.29e-11,44;CL:0000133,2.29e-11,44;CL:0000540,8.96e-11,33;CL:0000047,8.96e-11,33;CL:0000031,8.96e-11,33;CL:0000404,8.96e-11,33;CL:0002319,1.58e-10,43;CL:0002321,4.87e-10,70;CL:0002609,6.88e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.96e-08,73;UBERON:0002020,3.12e-08,34;UBERON:0001016,8.37e-08,75;UBERON:0002346,3.22e-07,64;UBERON:0003075,3.22e-07,64;UBERON:0007284,3.22e-07,64;UBERON:0001049,6.10e-07,52;UBERON:0005068,6.10e-07,52;UBERON:0006241,6.10e-07,52;UBERON:0007135,6.10e-07,52;UBERON:0004121,7.11e-07,95;UBERON:0000924,7.11e-07,95;UBERON:0006601,7.11e-07,95
|phase1_expression=0.640595388419176,0,0,0,0,0,0.467225281191051,0.129123323441576,0.563154888606667,0,0.34243593645101,0.159544317990673,0,0,0,0.202475267389826,0,0.157731082679119,0,0.42438965179803,0.0850432901510698,1.09220046320974,1.30599894569468,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0.755380907853464,1.11514624341466,6.9747765821439,0,1.09012578190223,0.219686182734472,1.1665793944457,0.419959264876088,0,0,1.45072428402269,0.336093799142464,1.54355661621568,0.85960031981627,0,2.83243045203437,6.87688273053643,6.97214543856797,0.338844532069132,1.77858959222228,0.899899717281399,0,0,3.89480143673926,1.53687322128622,6.947204024668,19.9808788730902,9.46462326081219,0.571301968807607,2.20868540951614,4.89963196859816,3.54628242767475,13.7882817991503,0,0.127687338085188,0.307213066512487,3.29715719325485,2.47016637726506,5.2091337055676,0.279182999001381,1.12552522006336,0.15279824777681,3.24091444021034,1.85083185038834,2.23679334990361,0.757261933331841,0.529000920747499,0.289864488701678,0,0,0,0,0,0.280888840263504,0.511290967734173,1.81850203222008,1.41335829804136,4.22530259330042,0,0,7.11066703153331,14.2884087067401,12.6679932737549,17.1878311305026,0.34255163915718,0,0,0.867426633830679,0.304465478312141,0.461230994512117,0.452167921657868,0.587943535678524,0.502666365318702,0,0,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,0.239630249011841,0,0.508280908292259,0,0,2.1361239859187,0,0.511430914660661,0,0.324482526135515,1.2220723662038,0.497627882440372,0,0,0.780722657776222,0.229902104433473,0.360124259610698,2.71268672104287,1.97305847538851,0.896796041993948,3.65436725782942,0.258703370739016,0.646703978798527,1.32374256117473,0.527853372491847,1.09597866213787,1.11218899690239,0,0.61734640922383,5.37392520409932,0,0,0,0.621377317606506,0.469052119962192,1.80062061461015,0.710234206755631,0.590292695242212,0.462801338662135,0.930135779001631,2.68273401399619,1.40118410840603,1.6455984991348,0.656669856316381,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0,1.02904612379284,0,0,0.853153002140936,0.928946687441754,0.515469845288373,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0.398282546508734,1.70701110857774,0.913988100877831,0,0.407302655690628,0.775809948670503,0.420814919341911,0.632365371242573,0,0.31399745568275,0.246794327843601,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,2.87536413054709,0,0.312037673114561,0,0,0,0.554259570499814,0.947457058852424,0.651859905768103,2.37643120085263,1.40814148973101,0.670025029767263,0.714130922658041,0.195133647857799,0.630540576424764,0.221464689648775,0.478364305972461,0.327726629431476,0.863424909329478,0.433947175744535,0,0,0,0.551873492609465,0.321101179975584,0.234423373184406,0.655739781506702,0.504941854408746,0,0.390438744296638,1.50796378412959,0.955875191810208,0.891194696329576,0.849229592366497,2.02405350837447,1.16902343164525,0.395287777946524,0,0.425820255624806,2.84904965867608,2.28041743095006,0.329940245945071,1.32745138339963,2.91336763385978,1.81394134178851,1.50884063804718,0.295301892880773,0.614870295887855,0.775284879504663,1.09060118843252,1.42598951353889,0.316036757935816,0,0,0.340439605753788,1.62054984628179,2.8458910432206,2.14337035031592,0,1.60531935841864,0.658196082408484,0.913394847343798,0,0.21183207086382,0,0,0,0.241251699712623,0.358117032009409,0.164140899745061,0,0.18542530201051,0.170870880797853,1.44470807574256,0.370389054739423,0,0,0,0,0,0.414599921413271,0,0.790839983952838,0.203319467126849,0.972048067396211,0.627264888043406,0.218362563746178,0.539457385539283,0.165306911450672,0.26175594198403,0.388844919875379,0,0,1.49516546043979,0.827292452285488,0.583353565032143,2.45403664607689,1.01373675294467,1.05621514781179,0.651021924219751,0.524296722128554,0.241584120826006,0,0.632022241256357,2.63542779877213,1.23253148597793,0.649604114888975,0.358053391334963,0.79472541912506,0.600977247599844,1.18151621739662,0.605798699688886,0.838274873204998,0.403304740547362,0.682205165178267,1.34696578296461,0.935015217452552,0.226730383615211,0,0,0.167884616364078,0,0.187682475451182,0.915758121336325,0,0,0.564751842617067,0,0,1.03111909406213,0,1.5107877947794,0,0,0.453142408984205,0,1.764384908931,0.399024873401031,1.19513524027894,0.243106717068294,0.838452650511929,0.367687016900028,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.384150914429216,0.287177344778066,0.476293691283074,0.463537303779422,0,1.23625770240992,0.588795680537589,0.685738504770831,0.532427418478012,0.476872379894642,0.726732083161643,0.376437521661322,0.338458431566706,1.09756783723664,1.05227884575137,0.814824683075171,0.561142271657738,0.474540072496697,0.591026894253381,0.409231043169689,0.929621047115796,0.385813221962283,0.749431733813838,0,0,0.57386499620653,0.661774257358546,0
|short_description=p@chr13:29043389..29043410,+
}}

Latest revision as of 21:04, 5 August 2015

Short description:p@chr13:29043389..29043410, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr13:29043389..29043410, +
Coexpression cluster:MCL_coexpression_mm9:667
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr13:29043389..29043410+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.98
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.19
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.96e-0873
gray matter3.12e-0834
nervous system8.37e-0875
neurectoderm3.22e-0764
neural plate3.22e-0764
presumptive neural plate3.22e-0764
neural tube6.10e-0752
neural rod6.10e-0752
future spinal cord6.10e-0752
neural keel6.10e-0752
ectoderm-derived structure7.11e-0795
ectoderm7.11e-0795
presumptive ectoderm7.11e-0795
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