FFCP PHASE1:Mm9::chr13:29045321..29045337,-: Difference between revisions
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{{FFCP|EntrezGene=20677|HGNC=|MCL_coexpression_id=76|UniProt=Q06831|association_with_transcript=213bp_to_NM_009238,uc007pyk.1_5end|description=CAGE_peak_2_at_Sox4_5end|id=chr13:29045321..29045337,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,3.05e-10,6;CL:0000117,1.59e-07,23;CL:0000337,1.59e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0.467225281191051,0.258246646883153,0.563154888606667,0,0,0.159544317990673,0.342401459862411,0.262261207256992,0,0,0,0,0,0,0.0850432901510698,0.198581902401771,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.881277725829041,1.21652317463417,2.0190142737785,0,1.74420125104357,1.09843091367236,0.388859798148567,0.55994568650145,0,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,2.63011399117477,3.1739458756322,3.80298842103708,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,29.3441602832992,40.5017814995072,31.9693941254101,0,0.441737081903227,11.8816075238505,10.2554653989513,16.5459381589804,0,0,0,2.50583946687368,2.37867873366265,1.56274011167028,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0.931997229126503,1.06016670666458,1.5870027622425,0.869593466105033,0,0,0,0,0,0.140444420131752,0.511290967734173,0.779358013808606,0.35333957451034,0.563373679106722,0,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0,0,0.599075622529601,1.19980546198682,2.03312363316904,0.149790639404823,0,8.29318723944905,0,0.255715457330331,0,0.324482526135515,0.81471491080253,0.248813941220186,0,0,0.650602214813519,0.229902104433473,0.180062129805349,0.753524089178575,0.748401490664606,1.15302348256365,0.937017245597288,0.517406741478031,0.215567992932842,1.13463648100692,0.879755620819744,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,1.19420560091096,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0.703578179943289,0.180062061461015,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0,0.700592054203017,0.329119699826961,0.820837320395476,0.324275238183423,0.146199987425332,0.439100230582101,0.268412837520744,0.210289948564127,26.5493899938554,0,0,0.639864751605702,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0,1.89667900953082,0.228497025219458,1.1270773567308,0.610953983535943,0.775809948670503,1.05203729835478,0.632365371242573,0.295220295959204,0.31399745568275,0.616985819609003,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0.488894929326078,0.509235257325564,0.704070744865506,0.502518772325447,0.476087281772027,0.780534591431195,0.788175720530955,0.664394068946325,0.637819074629948,0,0.518054945597687,0.723245292907558,0,0,0.983528546038072,0,0,0,1.80328439914343,0.252470927204373,0,0.390438744296638,0.861693590931196,0.716906393857656,0.222798674082394,0.283076530788832,0,0.584511715822624,1.58115111178609,0.642642632843614,0.425820255624806,0.712262414669021,1.30309567482861,0.494910368917606,0,0,0.302323556964751,0.565815239267694,0.590603785761546,0.614870295887855,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,2.04263763452273,0.720244376125241,0.776152102696527,1.07168517515796,2.6601035046341,1.24858172321449,0,0.608929898229199,0,0,0,0.32977250588296,1.29171541356724,0.72375509913787,0.954978752025092,0.820704498725306,0.291480836629851,0,0,0.619160603889667,0.370389054739423,0,0.136694227721025,0.228778173206523,1.5298058699447,2.37917468950219,0.829199842826543,0,0.474503990371703,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.41326727862668,0.785267825952089,0,0,0,0.747582730219894,0.496375471371293,0.194451188344048,0.516639293910924,0.337912250981556,0.469428954583016,0.781226309063701,1.25831213310853,0.241584120826006,0,0,0,0.308132871494482,0.51968329191118,0.895133478337407,0.79472541912506,0.360586348559907,0.738447635872886,0.706765149637033,0.914481679859998,0.604957110821043,0.682205165178267,0.288635524920988,1.05189211963412,0.680191150845634,0,0,0.167884616364078,0.386379188064381,0,0.549454872801795,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.62272408550506,1.19707462020309,0.512200817262403,0.972426868273176,0.838452650511929,2.38996560985018,1.77797382241292,1.85431551515005,0.962757628775446,0.758091635291392,2.28131369901216,1.69763707247469,2.34103768674706,0.89635213366817,1.66562859971278,1.90517476513229,1.0429589335037,1.54327376370964,1.23625770240992,1.91358596174717,2.40008476669791,1.06485483695602,1.90748951957857,2.61623549938191,1.59985946706062,1.52306294205018,1.28049581010941,1.8414879800649,1.49384525230448,1.12228454331548,1.30498519936592,1.57607171800902,0.818462086339379,1.54936841185966,0.771626443924566,6.49507502638659,0.935726433781634,1.07435527024149,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p2@Sox4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20677 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q06831 | |||
|association_with_transcript=213bp_to_NM_009238,uc007pyk.1_5end | |||
|cluster_id=chr13:29045321..29045337,- | |||
|description=CAGE_peak_2_at_Sox4_5end | |||
|id=chr13:29045321..29045337,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.05e-10,6;CL:0000117,1.59e-07,23;CL:0000337,1.59e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0.467225281191051,0.258246646883153,0.563154888606667,0,0,0.159544317990673,0.342401459862411,0.262261207256992,0,0,0,0,0,0,0.0850432901510698,0.198581902401771,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.881277725829041,1.21652317463417,2.0190142737785,0,1.74420125104357,1.09843091367236,0.388859798148567,0.55994568650145,0,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,2.63011399117477,3.1739458756322,3.80298842103708,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,29.3441602832992,40.5017814995072,31.9693941254101,0,0.441737081903227,11.8816075238505,10.2554653989513,16.5459381589804,0,0,0,2.50583946687368,2.37867873366265,1.56274011167028,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0.931997229126503,1.06016670666458,1.5870027622425,0.869593466105033,0,0,0,0,0,0.140444420131752,0.511290967734173,0.779358013808606,0.35333957451034,0.563373679106722,0,0,0,0.865964164044856,1.01343946190039,0.505524445014783,0,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0,0,0.323533699894818,0,0.484875253135222,0,0,0,0,0.599075622529601,1.19980546198682,2.03312363316904,0.149790639404823,0,8.29318723944905,0,0.255715457330331,0,0.324482526135515,0.81471491080253,0.248813941220186,0,0,0.650602214813519,0.229902104433473,0.180062129805349,0.753524089178575,0.748401490664606,1.15302348256365,0.937017245597288,0.517406741478031,0.215567992932842,1.13463648100692,0.879755620819744,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,1.19420560091096,0.702213187313235,0.51469581422943,0.284163499395593,0.207125772535502,0.703578179943289,0.180062061461015,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0,0.700592054203017,0.329119699826961,0.820837320395476,0.324275238183423,0.146199987425332,0.439100230582101,0.268412837520744,0.210289948564127,26.5493899938554,0,0,0.639864751605702,0.232236671860439,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0,1.89667900953082,0.228497025219458,1.1270773567308,0.610953983535943,0.775809948670503,1.05203729835478,0.632365371242573,0.295220295959204,0.31399745568275,0.616985819609003,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0.488894929326078,0.509235257325564,0.704070744865506,0.502518772325447,0.476087281772027,0.780534591431195,0.788175720530955,0.664394068946325,0.637819074629948,0,0.518054945597687,0.723245292907558,0,0,0.983528546038072,0,0,0,1.80328439914343,0.252470927204373,0,0.390438744296638,0.861693590931196,0.716906393857656,0.222798674082394,0.283076530788832,0,0.584511715822624,1.58115111178609,0.642642632843614,0.425820255624806,0.712262414669021,1.30309567482861,0.494910368917606,0,0,0.302323556964751,0.565815239267694,0.590603785761546,0.614870295887855,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,2.04263763452273,0.720244376125241,0.776152102696527,1.07168517515796,2.6601035046341,1.24858172321449,0,0.608929898229199,0,0,0,0.32977250588296,1.29171541356724,0.72375509913787,0.954978752025092,0.820704498725306,0.291480836629851,0,0,0.619160603889667,0.370389054739423,0,0.136694227721025,0.228778173206523,1.5298058699447,2.37917468950219,0.829199842826543,0,0.474503990371703,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.41326727862668,0.785267825952089,0,0,0,0.747582730219894,0.496375471371293,0.194451188344048,0.516639293910924,0.337912250981556,0.469428954583016,0.781226309063701,1.25831213310853,0.241584120826006,0,0,0,0.308132871494482,0.51968329191118,0.895133478337407,0.79472541912506,0.360586348559907,0.738447635872886,0.706765149637033,0.914481679859998,0.604957110821043,0.682205165178267,0.288635524920988,1.05189211963412,0.680191150845634,0,0,0.167884616364078,0.386379188064381,0,0.549454872801795,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.62272408550506,1.19707462020309,0.512200817262403,0.972426868273176,0.838452650511929,2.38996560985018,1.77797382241292,1.85431551515005,0.962757628775446,0.758091635291392,2.28131369901216,1.69763707247469,2.34103768674706,0.89635213366817,1.66562859971278,1.90517476513229,1.0429589335037,1.54327376370964,1.23625770240992,1.91358596174717,2.40008476669791,1.06485483695602,1.90748951957857,2.61623549938191,1.59985946706062,1.52306294205018,1.28049581010941,1.8414879800649,1.49384525230448,1.12228454331548,1.30498519936592,1.57607171800902,0.818462086339379,1.54936841185966,0.771626443924566,6.49507502638659,0.935726433781634,1.07435527024149,0.57386499620653,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Sox4 | |||
}} |
Revision as of 21:07, 5 August 2015
Short description: | p2@Sox4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sox4_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 213bp_to_NM_009238, uc007pyk.1_5end |
EntrezGene: | 20677 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.05e-10 | 6 |
CNS neuron (sensu Vertebrata) | 1.59e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-07 | 23 |