FFCP PHASE1:Mm9::chr11:44431115..44431132,+: Difference between revisions
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{{FFCP|EntrezGene=13591|HGNC=|MCL_coexpression_id=1565|UniProt=Q07802,Q5SWK4,Q5SWK8|association_with_transcript=296bp_to_ENSMUST00000081265,ENSMUST00000101326,ENSMUST00000109268_5end|description=CAGE_peak_9_at_Ebf1_5end|id=chr11:44431115..44431132,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,6.99e-07,23;CL:0000337,6.99e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000026!8.41e-08!13;UBERON:0004708!8.41e-08!13;UBERON:0002101!8.41e-08!13;UBERON:0004357!8.41e-08!13;UBERON:0009872!8.41e-08!13;UBERON:0004347!8.41e-08!13;UBERON:0005732!8.41e-08!13;UBERON:0005733!8.41e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.10e-10,6;UBERON:0005174,4.10e-10,6;UBERON:0001137,4.10e-10,6;UBERON:0003076,2.76e-09,12;UBERON:0003057,2.76e-09,12;UBERON:0010707,3.99e-09,13;UBERON:0001948,1.36e-08,5;UBERON:0002315,1.36e-08,5;UBERON:0000026,2.34e-08,12;UBERON:0004708,2.34e-08,12;UBERON:0002101,2.34e-08,12;UBERON:0004357,2.34e-08,12;UBERON:0004347,2.34e-08,12;UBERON:0005732,2.34e-08,12;UBERON:0005733,2.34e-08,12;UBERON:0010708,6.71e-08,8;UBERON:0002102,3.98e-07,7;UBERON:0004710,3.98e-07,7;UBERON:0005419,3.98e-07,7;UBERON:0005417,3.98e-07,7;UBERON:0005729,3.98e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809901069559304,0,1.89277299214943,2.05671650408608,0.84877930359606,0.0850432901510698,0.397163804803541,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,2.18117387875057,0.725362142011344,0,0.257259436035947,0.573066879877513,0,2.63011399117477,6.87688273053643,3.80298842103708,0,0,0,0,0,0,0,0.103689612308478,0,0,1.42825492201902,4.41737081903227,4.28717797252339,3.92966431174769,7.35375029288017,0,0.383062014255563,0.153606533256243,0.923204014111357,0.548925861614458,0.52091337055676,0,0,0.15279824777681,2.35702868378934,8.39992916714707,4.28718725398191,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0.852151612890289,0.519572009205738,0.35333957451034,0,0,2.54805239706646,0,0,0,0,0,1.03575153458869,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.722996784599558,1.76922110389975,1.29413479957927,2.20841518460394,0.969750506270444,0,1.75668478206928,0.83778682725382,0,0,0,0,0.149790639404823,0,4.39790232395025,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.746441823660558,0,0.210441855886474,0.520481771850815,0.689706313300419,2.34080768746954,3.31550599238573,0.612328492361951,0.12811372028485,0.187403449119458,0.517406741478031,1.5089759505299,3.40390944302075,4.04687585577082,1.09597866213787,2.50242524303038,0.696504333044333,1.23469281844766,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.0632365371242573,0.295220295959204,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,1.76605648986571,1.05490517932983,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.32977250588296,0.645857706783622,0.422190474497091,0.238744688006273,0.328281799490123,0.291480836629851,4.26478194624172,1.02522528478712,0,0.185194527369712,0,0.683471138605126,1.14389086603261,0,0,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,3.19219898720825,1.87806966329548,0.729320151204882,2.72497111416377,0.367687016900028,1.33348036680969,3.29656091582231,1.60459604795908,2.77966932940177,2.02783439912192,1.13175804831646,1.21733959710847,1.28050304809739,1.14870937911227,1.42888107384922,1.62238056322798,1.35036454324594,2.06042950401653,1.32479028120958,1.71434626192708,0.532427418478012,0.715308569841963,2.76158191601424,2.82328141245992,1.18460451048347,0.73171189149109,1.31534855718921,1.35804113845862,1.12228454331548,0.237270036248348,0.591026894253381,1.22769312950907,0.309873682371932,1.35034627686799,1.49886346762768,0.701794825336225,1.71896843238639,1.72159498861959,0.882365676478062,1.62307484934295|short_description=p9@Ebf1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13591 | |||
|HGNC= | |||
|MCL_coexpression_id=1565 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q07802,uniprot:Q5SWK4,uniprot:Q5SWK8 | |||
|association_with_transcript=296bp_to_ENSMUST00000081265,ENSMUST00000101326,ENSMUST00000109268_5end | |||
|cluster_id=chr11:44431115..44431132,+ | |||
|description=CAGE_peak_9_at_Ebf1_5end | |||
|id=chr11:44431115..44431132,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.99e-07,23;CL:0000337,6.99e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000026!8.41e-08!13;UBERON:0004708!8.41e-08!13;UBERON:0002101!8.41e-08!13;UBERON:0004357!8.41e-08!13;UBERON:0009872!8.41e-08!13;UBERON:0004347!8.41e-08!13;UBERON:0005732!8.41e-08!13;UBERON:0005733!8.41e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.10e-10,6;UBERON:0005174,4.10e-10,6;UBERON:0001137,4.10e-10,6;UBERON:0003076,2.76e-09,12;UBERON:0003057,2.76e-09,12;UBERON:0010707,3.99e-09,13;UBERON:0001948,1.36e-08,5;UBERON:0002315,1.36e-08,5;UBERON:0000026,2.34e-08,12;UBERON:0004708,2.34e-08,12;UBERON:0002101,2.34e-08,12;UBERON:0004357,2.34e-08,12;UBERON:0004347,2.34e-08,12;UBERON:0005732,2.34e-08,12;UBERON:0005733,2.34e-08,12;UBERON:0010708,6.71e-08,8;UBERON:0002102,3.98e-07,7;UBERON:0004710,3.98e-07,7;UBERON:0005419,3.98e-07,7;UBERON:0005417,3.98e-07,7;UBERON:0005729,3.98e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809901069559304,0,1.89277299214943,2.05671650408608,0.84877930359606,0.0850432901510698,0.397163804803541,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,2.18117387875057,0.725362142011344,0,0.257259436035947,0.573066879877513,0,2.63011399117477,6.87688273053643,3.80298842103708,0,0,0,0,0,0,0,0.103689612308478,0,0,1.42825492201902,4.41737081903227,4.28717797252339,3.92966431174769,7.35375029288017,0,0.383062014255563,0.153606533256243,0.923204014111357,0.548925861614458,0.52091337055676,0,0,0.15279824777681,2.35702868378934,8.39992916714707,4.28718725398191,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0.852151612890289,0.519572009205738,0.35333957451034,0,0,2.54805239706646,0,0,0,0,0,1.03575153458869,0,0.173485326766136,0.608930956624282,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.722996784599558,1.76922110389975,1.29413479957927,2.20841518460394,0.969750506270444,0,1.75668478206928,0.83778682725382,0,0,0,0,0.149790639404823,0,4.39790232395025,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.746441823660558,0,0.210441855886474,0.520481771850815,0.689706313300419,2.34080768746954,3.31550599238573,0.612328492361951,0.12811372028485,0.187403449119458,0.517406741478031,1.5089759505299,3.40390944302075,4.04687585577082,1.09597866213787,2.50242524303038,0.696504333044333,1.23469281844766,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.0632365371242573,0.295220295959204,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,1.76605648986571,1.05490517932983,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0.32977250588296,0.645857706783622,0.422190474497091,0.238744688006273,0.328281799490123,0.291480836629851,4.26478194624172,1.02522528478712,0,0.185194527369712,0,0.683471138605126,1.14389086603261,0,0,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.337912250981556,0,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,3.19219898720825,1.87806966329548,0.729320151204882,2.72497111416377,0.367687016900028,1.33348036680969,3.29656091582231,1.60459604795908,2.77966932940177,2.02783439912192,1.13175804831646,1.21733959710847,1.28050304809739,1.14870937911227,1.42888107384922,1.62238056322798,1.35036454324594,2.06042950401653,1.32479028120958,1.71434626192708,0.532427418478012,0.715308569841963,2.76158191601424,2.82328141245992,1.18460451048347,0.73171189149109,1.31534855718921,1.35804113845862,1.12228454331548,0.237270036248348,0.591026894253381,1.22769312950907,0.309873682371932,1.35034627686799,1.49886346762768,0.701794825336225,1.71896843238639,1.72159498861959,0.882365676478062,1.62307484934295 | |||
|short_description=p9@Ebf1 | |||
}} |
Revision as of 22:25, 5 August 2015
Short description: | p9@Ebf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Ebf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1565 |
Association with transcript: | 296bp_to_ENSMUST00000081265, ENSMUST00000101326, ENSMUST00000109268_5end |
EntrezGene: | 13591 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.99e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.99e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.10e-10 | 6 |
dorsal region element | 4.10e-10 | 6 |
dorsum | 4.10e-10 | 6 |
posterior neural tube | 2.76e-09 | 12 |
chordal neural plate | 2.76e-09 | 12 |
appendage girdle complex | 3.99e-09 | 13 |
regional part of spinal cord | 1.36e-08 | 5 |
gray matter of spinal cord | 1.36e-08 | 5 |
appendage | 2.34e-08 | 12 |
paired limb/fin | 2.34e-08 | 12 |
limb | 2.34e-08 | 12 |
paired limb/fin bud | 2.34e-08 | 12 |
limb bud | 2.34e-08 | 12 |
limb/fin field | 2.34e-08 | 12 |
limb field | 2.34e-08 | 12 |
pectoral complex | 6.71e-08 | 8 |
forelimb | 3.98e-07 | 7 |
pectoral appendage | 3.98e-07 | 7 |
pectoral appendage bud | 3.98e-07 | 7 |
forelimb bud | 3.98e-07 | 7 |
forelimb/pectoral fin field | 3.98e-07 | 7 |