FFCP PHASE1:Mm9::chr18:6136418..6136425,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=366|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:6136418..6136425,+|id=chr18:6136418..6136425,+|ontology_enrichment_celltype=CL:0002563!6.46e-16!9;CL:0002251!6.46e-16!9;CL:0000239!1.33e-13!6;CL:0000677!1.33e-13!6;CL:0000212!1.33e-13!6;CL:0000584!1.33e-13!6;CL:0000075!1.54e-11!7;CL:0000066!2.28e-09!25;CL:0002076!6.44e-09!15;CL:0000223!4.07e-08!20|ontology_enrichment_celltype_v019_2=CL:0002250,4.15e-39,3;CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0000223,4.59e-14,20;CL:0002563,6.62e-14,9;CL:0002251,6.62e-14,9;CL:0000066,1.80e-11,25;CL:0000215,4.56e-11,3;CL:0002076,8.43e-09,15;CL:0000182,3.64e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!6.46e-16!9;UBERON:0004808!6.46e-16!9;UBERON:0001277!6.46e-16!9;UBERON:0000344!1.43e-13!15;UBERON:0001242!3.29e-13!13;UBERON:0000060!3.29e-13!13;UBERON:0001262!3.29e-13!13;UBERON:0004786!3.29e-13!13;UBERON:0000485!9.87e-13!11;UBERON:0004923!1.13e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0003350,6.62e-14,9;UBERON:0004808,6.62e-14,9;UBERON:0001277,6.62e-14,9;UBERON:0000485,1.36e-11,11;UBERON:0001242,5.52e-10,13;UBERON:0001262,5.52e-10,13;UBERON:0004786,5.52e-10,13;UBERON:0000344,8.43e-09,15;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5|phase1_expression=0,0.697950815278722,0.909998478779072,0.60492842261366,0.500895729946347,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0,0,0.221730510655305,0.635030673459631,0,0,4.04392267651784,0,1.63335485009895,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08715426273523,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.404593039154462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p@chr18:6136418..6136425,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=366 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:6136418..6136425,+ | |||
|description=CAGE_peak_at_chr18:6136418..6136425,+ | |||
|id=chr18:6136418..6136425,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.46e-16!9;CL:0002251!6.46e-16!9;CL:0000239!1.33e-13!6;CL:0000677!1.33e-13!6;CL:0000212!1.33e-13!6;CL:0000584!1.33e-13!6;CL:0000075!1.54e-11!7;CL:0000066!2.28e-09!25;CL:0002076!6.44e-09!15;CL:0000223!4.07e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.15e-39,3;CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0000223,4.59e-14,20;CL:0002563,6.62e-14,9;CL:0002251,6.62e-14,9;CL:0000066,1.80e-11,25;CL:0000215,4.56e-11,3;CL:0002076,8.43e-09,15;CL:0000182,3.64e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!6.46e-16!9;UBERON:0004808!6.46e-16!9;UBERON:0001277!6.46e-16!9;UBERON:0000344!1.43e-13!15;UBERON:0001242!3.29e-13!13;UBERON:0000060!3.29e-13!13;UBERON:0001262!3.29e-13!13;UBERON:0004786!3.29e-13!13;UBERON:0000485!9.87e-13!11;UBERON:0004923!1.13e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0003350,6.62e-14,9;UBERON:0004808,6.62e-14,9;UBERON:0001277,6.62e-14,9;UBERON:0000485,1.36e-11,11;UBERON:0001242,5.52e-10,13;UBERON:0001262,5.52e-10,13;UBERON:0004786,5.52e-10,13;UBERON:0000344,8.43e-09,15;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0.60492842261366,0.500895729946347,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0,0,0.221730510655305,0.635030673459631,0,0,4.04392267651784,0,1.63335485009895,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08715426273523,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.404593039154462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr18:6136418..6136425,+ | |||
}} |
Latest revision as of 23:39, 5 August 2015
Short description: | p@chr18:6136418..6136425, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:6136418..6136425, + |
Coexpression cluster: | MCL_coexpression_mm9:366 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.15e-39 | 3 |
lining cell | 2.87e-30 | 1 |
meso-epithelial cell | 2.87e-30 | 1 |
endothelial cell | 2.87e-30 | 1 |
endothelial cell of sinusoid | 2.87e-30 | 1 |
endothelial cell of hepatic sinusoid | 2.87e-30 | 1 |
endodermal cell | 4.59e-14 | 20 |
intestinal epithelial cell | 6.62e-14 | 9 |
epithelial cell of alimentary canal | 6.62e-14 | 9 |
epithelial cell | 1.80e-11 | 25 |
barrier cell | 4.56e-11 | 3 |
endo-epithelial cell | 8.43e-09 | 15 |
hepatocyte | 3.64e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.87e-30 | 1 |
hepatic sinusoid | 2.87e-30 | 1 |
parenchyma | 2.87e-30 | 1 |
abdomen blood vessel | 2.87e-30 | 1 |
sinusoid | 2.87e-30 | 1 |
digestive system duct | 2.87e-30 | 1 |
abdominal segment blood vessel | 2.87e-30 | 1 |
trunk blood vessel | 2.87e-30 | 1 |
liver parenchyma | 2.87e-30 | 1 |
liver lobule | 2.87e-30 | 1 |
biliary system | 2.87e-30 | 1 |
biliary tree | 2.87e-30 | 1 |
biliary bud | 2.87e-30 | 1 |
hepatic duct | 2.87e-30 | 1 |
epithelium of mucosa | 6.62e-14 | 9 |
gastrointestinal system epithelium | 6.62e-14 | 9 |
intestinal epithelium | 6.62e-14 | 9 |
simple columnar epithelium | 1.36e-11 | 11 |
intestinal mucosa | 5.52e-10 | 13 |
wall of intestine | 5.52e-10 | 13 |
gastrointestinal system mucosa | 5.52e-10 | 13 |
mucosa | 8.43e-09 | 15 |
vessel | 3.64e-07 | 5 |
epithelial tube open at both ends | 3.64e-07 | 5 |
blood vessel | 3.64e-07 | 5 |
vasculature | 3.64e-07 | 5 |
vascular system | 3.64e-07 | 5 |
blood vasculature | 3.64e-07 | 5 |
vascular cord | 3.64e-07 | 5 |