FFCP PHASE1:Mm9::chr13:41582510..41582539,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=177|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:41582510..41582539,+|id=chr13:41582510..41582539,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,7.31e-10,25;CL:0000553,1.51e-08,6;CL:0000556,1.51e-08,6;CL:0000838,2.81e-08,12;CL:0000988,3.69e-08,32;CL:0002032,3.69e-08,32;CL:0000037,3.69e-08,32;CL:0000837,3.69e-08,32;CL:0000542,1.58e-07,13;CL:0000051,1.58e-07,13;CL:0000084,6.93e-07,11;CL:0000827,6.93e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.73e-07,3;DOID:4045,4.73e-07,3|ontology_enrichment_uberon=UBERON:0003081!2.47e-10!88;UBERON:0000926!3.43e-10!193;UBERON:0004120!3.43e-10!193;UBERON:0006603!3.43e-10!193;UBERON:0002193!3.81e-10!48;UBERON:0002390!5.48e-09!45;UBERON:0003061!5.48e-09!45;UBERON:0003104!2.68e-07!131;UBERON:0009142!2.68e-07!131;UBERON:0004177!4.00e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.74e-08,32;UBERON:0003081,2.85e-08,87;UBERON:0002193,4.89e-08,48;UBERON:0002405,4.89e-08,48;UBERON:0000926,1.28e-07,120;UBERON:0004120,1.28e-07,120;UBERON:0006603,1.28e-07,120|phase1_expression=0.320297694209588,0,0,0,0,0,0,2.06597317506522,1.12630977721333,0.936258105287974,1.19852577757853,0.638177271962691,2.56801094896809,1.48614684112296,4.66353666541928,2.83465374345756,0.699561878128147,16.2463015159492,16.8650753335059,14.004858509335,0.255129870453209,0.695036658406197,1.82839852397255,0.47997726838022,1.14704640533585,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0,19.2524550138978,10.9386948233332,11.5175223674236,34.7056577938298,22.5405010036287,17.9638830621527,0,0,0,0,0,0,0,0,0,5.70460860596304,0,1.68046899571232,1.28629718017973,0.85960031981627,1.54701627683233,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0,0.142371680799103,0,0,0,1.73918693221007,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,17.3488382043605,1.1875371125186,0.173485326766136,0.304465478312141,0,0.60289056221049,0.587943535678524,0.502666365318702,0.247194967734374,1.3013942122792,6.19227386364912,0.161766849947409,1.98757366614354,0.484875253135222,0,0,0,1.02182822083437,0.479260498023681,0.599902730993408,0.381210681219194,0.898743836428936,0.457500602818626,0,0.173824320192276,1.02286182932132,0.41557608911912,0,0.203678727700633,1.24406970610093,0.505445516867349,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0,0,1.0447564995665,0.411564272815887,0.199034266818493,0.702213187313235,0.772043721344145,1.13665399758237,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.350296027101508,0.493679549740441,0.164167464079095,0.891756905004413,1.60819986167866,1.75640092232841,0.671032093801859,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,0.407302655690628,0,0.280543279561274,0.569128834118316,0.738050739898011,0.941992367048249,0.863780147452604,0,0,0,0,0,0.241177159752417,0.50925170356284,1.15078454980324,0.648540907100142,0.549122826376163,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,2.21703828199926,0,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,1.10344600874334,0.44292937929755,0.956728611944923,1.3109065177259,1.55416483679306,1.3018415272336,0,0,0,0.551873492609465,0.80275294993896,0.35163505977661,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0,0.329940245945071,0,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,0,0.516856586336442,0.727067458955011,0.712994756769443,0.948110273807448,0,3.09406629744561,0.680879211507576,0.18006109403131,0,0.214337035031592,0,0,0.658196082408484,0.304464949114599,0.469343416127421,0,0.441056796109924,0.49465875882444,0.484393280087717,0.361877549568935,0.358117032009409,0.164140899745061,0,0.556275906031529,5.80960994712699,0.412773735926445,0.925972636848558,2.26042148405629,4.51090951479383,4.11800711771741,0.339956859987711,1.25956307091292,1.24379976423981,0,0,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0,0.41326727862668,0.523511883968059,0,0,0,0.149516546043979,0,0.388902376688095,0.516639293910924,0,0.234714477291508,0.39061315453185,0,0,0,0.316011120628178,0.405450430580328,1.02710957164827,0.51968329191118,0.716106782669926,0.596044064343795,0.480781798079875,0.443068581523732,0.302899349844443,0.381034033274999,0.705783295957884,1.46186821109629,0.769694733122636,0.701261413089414,0,0,0,0,0.386379188064381,0.187682475451182,1.64836461840539,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:41582510..41582539,+ | |||
|description=CAGE_peak_at_chr13:41582510..41582539,+ | |||
|id=chr13:41582510..41582539,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,7.31e-10,25;CL:0000553,1.51e-08,6;CL:0000556,1.51e-08,6;CL:0000838,2.81e-08,12;CL:0000988,3.69e-08,32;CL:0002032,3.69e-08,32;CL:0000037,3.69e-08,32;CL:0000837,3.69e-08,32;CL:0000542,1.58e-07,13;CL:0000051,1.58e-07,13;CL:0000084,6.93e-07,11;CL:0000827,6.93e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.73e-07,3;DOID:4045,4.73e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003081!2.47e-10!88;UBERON:0000926!3.43e-10!193;UBERON:0004120!3.43e-10!193;UBERON:0006603!3.43e-10!193;UBERON:0002193!3.81e-10!48;UBERON:0002390!5.48e-09!45;UBERON:0003061!5.48e-09!45;UBERON:0003104!2.68e-07!131;UBERON:0009142!2.68e-07!131;UBERON:0004177!4.00e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.74e-08,32;UBERON:0003081,2.85e-08,87;UBERON:0002193,4.89e-08,48;UBERON:0002405,4.89e-08,48;UBERON:0000926,1.28e-07,120;UBERON:0004120,1.28e-07,120;UBERON:0006603,1.28e-07,120 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,2.06597317506522,1.12630977721333,0.936258105287974,1.19852577757853,0.638177271962691,2.56801094896809,1.48614684112296,4.66353666541928,2.83465374345756,0.699561878128147,16.2463015159492,16.8650753335059,14.004858509335,0.255129870453209,0.695036658406197,1.82839852397255,0.47997726838022,1.14704640533585,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0,19.2524550138978,10.9386948233332,11.5175223674236,34.7056577938298,22.5405010036287,17.9638830621527,0,0,0,0,0,0,0,0,0,5.70460860596304,0,1.68046899571232,1.28629718017973,0.85960031981627,1.54701627683233,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0,0.142371680799103,0,0,0,1.73918693221007,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,17.3488382043605,1.1875371125186,0.173485326766136,0.304465478312141,0,0.60289056221049,0.587943535678524,0.502666365318702,0.247194967734374,1.3013942122792,6.19227386364912,0.161766849947409,1.98757366614354,0.484875253135222,0,0,0,1.02182822083437,0.479260498023681,0.599902730993408,0.381210681219194,0.898743836428936,0.457500602818626,0,0.173824320192276,1.02286182932132,0.41557608911912,0,0.203678727700633,1.24406970610093,0.505445516867349,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0,0,1.0447564995665,0.411564272815887,0.199034266818493,0.702213187313235,0.772043721344145,1.13665399758237,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.350296027101508,0.493679549740441,0.164167464079095,0.891756905004413,1.60819986167866,1.75640092232841,0.671032093801859,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,0.407302655690628,0,0.280543279561274,0.569128834118316,0.738050739898011,0.941992367048249,0.863780147452604,0,0,0,0,0,0.241177159752417,0.50925170356284,1.15078454980324,0.648540907100142,0.549122826376163,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,2.21703828199926,0,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,1.10344600874334,0.44292937929755,0.956728611944923,1.3109065177259,1.55416483679306,1.3018415272336,0,0,0,0.551873492609465,0.80275294993896,0.35163505977661,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0,0.329940245945071,0,0.242780636154981,0.302323556964751,0.565815239267694,0.295301892880773,0,0.516856586336442,0.727067458955011,0.712994756769443,0.948110273807448,0,3.09406629744561,0.680879211507576,0.18006109403131,0,0.214337035031592,0,0,0.658196082408484,0.304464949114599,0.469343416127421,0,0.441056796109924,0.49465875882444,0.484393280087717,0.361877549568935,0.358117032009409,0.164140899745061,0,0.556275906031529,5.80960994712699,0.412773735926445,0.925972636848558,2.26042148405629,4.51090951479383,4.11800711771741,0.339956859987711,1.25956307091292,1.24379976423981,0,0,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0,0.41326727862668,0.523511883968059,0,0,0,0.149516546043979,0,0.388902376688095,0.516639293910924,0,0.234714477291508,0.39061315453185,0,0,0,0.316011120628178,0.405450430580328,1.02710957164827,0.51968329191118,0.716106782669926,0.596044064343795,0.480781798079875,0.443068581523732,0.302899349844443,0.381034033274999,0.705783295957884,1.46186821109629,0.769694733122636,0.701261413089414,0,0,0,0,0.386379188064381,0.187682475451182,1.64836461840539,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0,0,0,0.50695859978048,0.377252682772152,0.187283014939765,0.512201219238954,0.459483751644906,0.476293691283074,0.347652977834566,0.38581844092741,0,0.147198920134397,0.685738504770831,0.70990322463735,0.238436189947321,0.145346416632329,0.564656282491984,0.25384382367503,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0.578719832943424,0,0.701794825336225,0,0,0.661774257358546,0.927471342481686 | |||
|short_description=p@chr13:41582510..41582539,+ | |||
}} |
Latest revision as of 23:41, 5 August 2015
Short description: | p@chr13:41582510..41582539, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:41582510..41582539, + |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 7.31e-10 | 25 |
megakaryocyte progenitor cell | 1.51e-08 | 6 |
megakaryocyte | 1.51e-08 | 6 |
lymphoid lineage restricted progenitor cell | 2.81e-08 | 12 |
hematopoietic cell | 3.69e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.69e-08 | 32 |
hematopoietic stem cell | 3.69e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.69e-08 | 32 |
lymphocyte | 1.58e-07 | 13 |
common lymphoid progenitor | 1.58e-07 | 13 |
T cell | 6.93e-07 | 11 |
pro-T cell | 6.93e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.74e-08 | 32 |
lateral plate mesoderm | 2.85e-08 | 87 |
hemolymphoid system | 4.89e-08 | 48 |
immune system | 4.89e-08 | 48 |
mesoderm | 1.28e-07 | 120 |
mesoderm-derived structure | 1.28e-07 | 120 |
presumptive mesoderm | 1.28e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.73e-07 | 3 |
muscle cancer | 4.73e-07 | 3 |