FFCP PHASE1:Mm9::chrX:138740713..138740730,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=66240|HGNC=|MCL_coexpression_id=176|UniProt=Q9QZ26|association_with_transcript=10bp_to_NM_021487,uc009ult.1_5end|description=CAGE_peak_1_at_Kcne1l_5end|id=chrX:138740713..138740730,-|ontology_enrichment_celltype=CL:0002319!9.96e-11!43;CL:0000221!2.31e-10!44;CL:0000133!2.31e-10!44;CL:0000117!8.72e-09!23;CL:0000337!8.72e-09!23;CL:0000540!5.13e-08!33;CL:0000047!5.13e-08!33;CL:0000031!5.13e-08!33;CL:0000404!5.13e-08!33;CL:0000055!7.24e-07!50|ontology_enrichment_celltype_v019_2=CL:0002319,5.45e-11,43;CL:0000221,2.60e-10,44;CL:0000133,2.60e-10,44;CL:0000117,3.62e-09,23;CL:0000337,3.62e-09,23;CL:0000540,2.34e-08,33;CL:0000047,2.34e-08,33;CL:0000031,2.34e-08,33;CL:0000404,2.34e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.41e-11!73;UBERON:0005743!3.41e-11!73;UBERON:0000073!2.17e-10!75;UBERON:0001016!2.17e-10!75;UBERON:0004121!7.29e-10!102;UBERON:0000924!7.29e-10!102;UBERON:0006601!7.29e-10!102;UBERON:0002346!2.73e-08!71;UBERON:0003075!2.73e-08!71;UBERON:0007284!2.73e-08!71;UBERON:0001049!2.08e-07!52;UBERON:0005068!2.08e-07!52;UBERON:0006241!2.08e-07!52;UBERON:0007135!2.08e-07!52;UBERON:0000468!2.17e-07!333;UBERON:0000033!7.09e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-11,73;UBERON:0001016,1.35e-10,75;UBERON:0004121,1.53e-10,95;UBERON:0000924,1.53e-10,95;UBERON:0006601,1.53e-10,95;UBERON:0002346,1.65e-09,64;UBERON:0003075,1.65e-09,64;UBERON:0007284,1.65e-09,64;UBERON:0000073,4.45e-08,54;UBERON:0010371,4.62e-08,73;UBERON:0001049,1.23e-07,52;UBERON:0005068,1.23e-07,52;UBERON:0006241,1.23e-07,52;UBERON:0007135,1.23e-07,52;UBERON:0010314,3.49e-07,92;UBERON:0002020,6.34e-07,34|phase1_expression=1.28119077683835,0.348975407639361,0,0.30246421130683,0,0.503637815735669,0.467225281191051,0,0.422366166455,0.936258105287974,0.856089841127525,0.159544317990673,0.513602189793617,0.0874204024189974,0,0,0.699561878128147,0,0.137114433605739,0.42438965179803,1.36069264241712,0,0.261199789138935,0.159992422793407,0.91763712426868,1.72269589234506,1.7230479846363,0.430942465371778,0.190023419456374,0.504060259519861,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,8.60630478782843,179.434703701107,27.2410866590745,23.1371579898397,20.5780039789283,63.2511283205875,0.335565212115473,1.45072428402269,1.00828139742739,0.257259436035947,1.14613375975503,1.03134418455488,16.589949790487,15.340738398889,15.8457850876545,5.42151251310611,3.55717918444456,0,0,0,70.4060259718251,137.550153305117,8.08778976006126,7.1553147315796,8.83364837675805,104.833911276196,93.8691299044358,14.2089327089347,17.1563393122643,22.0612508786405,13.2139057199266,12.1302971180928,15.2070467923681,12.0016521834476,12.6252948171325,15.6274011167028,25.1264699101243,17.4456409109821,16.8078072554491,50.6761167014708,67.6265483795739,22.1815340532108,0.37863096666592,0.302286240427142,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,1.40444420131752,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0.506719730950197,0,0.79928715803342,0.258937883647172,0.445326417194474,6.41895709034703,4.26251669636998,3.22861696158482,1.65794904607885,3.76283862834255,0.125666591329675,0,0,1.76922110389975,75.8686526253349,32.6845447321382,16.4857586065976,1.86391761218122,6.73395833126558,5.65506108396329,0.255457055208591,0.11981512450592,0,0,10.0359728401231,4.11750542536764,19.9790419859454,2.60736480288415,3.3243009452943,9.3504620051802,6.32740925964255,18.6366035846079,2.11491850037158,0.252722758433675,1.47309299120532,7.54698569183682,14.2539304748753,13.8647839950119,12.6592046982001,19.7986212530364,27.1601087003882,33.7326208415024,9.05461797586555,7.11374376678379,17.5868654556072,15.1317966780996,29.8106196101502,15.2925987074079,18.4573648256748,15.0220959577799,13.733364410476,0,0,0,19.8840741634082,13.8370375388847,10.4435995647389,11.6004920436753,7.47704080640135,6.63348585415727,3.0229412817553,3.48755421819505,2.56883753207773,3.29119699826961,1.31333971263276,1.86458261955468,1.16959989940266,1.53685080703735,0.671032093801859,2.52347938276953,12.8630765474106,0,0.528901133327089,8.95810652247983,11.8440702648824,11.9846739029547,8.47070803418039,7.33847544688072,9.3210556795154,0,3.62337700392824,2.5133520880027,1.98956472041151,1.75467678407208,0,0.432276099749388,0.398282546508734,10.0523987505133,5.59817711787671,9.01661885384643,4.48032921259691,5.81857461502877,5.40045813155453,6.70307293517127,1.62371162777562,1.41298855057237,0.863780147452604,0,1.50160595144485,1.37591296579242,1.34917267430912,0,0.964708639009667,1.52775511068852,0.287696137450811,0.162135226775035,0,0,0.744281895337007,1.5601883655728,0.252578877947112,0.358794827043824,0,0.184753190166605,7.20067364727842,10.7556884451737,6.62005834523234,5.63256595892405,5.69521275302174,2.85652369063216,0.975668239288994,2.52216230569906,2.6575762757853,1.2756381492599,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,1.65562047782839,8.50918126935297,11.3695335994437,0,34.5885170269991,4.41711507182759,2.73307121007647,1.29254038639679,4.30143836314594,4.01037613348309,3.96307143104365,12.9539424535966,14.3205370376543,8.69633111482352,9.96096080907602,0.567760340833074,17.2723635557238,18.0804524882469,1.15479086080775,0,6.5550771761845,5.74414758233027,4.52652191414155,5.61073596473468,5.53383266299069,4.13485269069154,3.27180356529755,9.26893183800275,0.316036757935816,0,0,0.340439605753788,3.78128297465751,3.75140182969988,1.92903331528433,3.19212420556092,3.38900753443934,3.45552943264454,2.74018454203139,0,0.21183207086382,0,0,5.8127193610526,9.71038091343309,3.70054266409723,4.26766339337159,0.874442509889552,15.2048747648618,0.341741761595705,14.2406938894624,12.222838806401,0.376736914009382,0.410082683163076,0,0.169978429993855,0.279902904647316,0.276399947608848,0.954670618015114,23.5670315217946,13.6224042974989,8.8564379473877,7.3180903605064,3.49380101993884,6.87808166562586,4.1326727862668,0.785267825952089,0.129614973291793,0.621339313086926,0.56369293868419,24.9692631893445,18.696809421652,14.1949367491155,13.0451421712508,11.1511042823914,8.44972118249428,6.2498104725096,0.734015410979976,0,1.72818003754719,0,2.8381530140623,2.2596410576262,0.649604114888975,1.79026695667481,1.39076948346885,0.961563596159751,0.738447635872886,0.504832249740738,0.0762068066549998,0.302478555410522,0,0.0962118416403295,0,1.13365191807606,0.221985953374065,0.269141569828427,1.17519231454855,0.386379188064381,0.375364950902364,0,0.857473516316263,1.00314420807073,3.3885110557024,5.52390283808612,5.15605962095457,4.81188910562325,2.05524755931193,2.2661816921691,2.02506750069542,1.35096360967266,2.71885445390523,2.07104124700728,8.09541311156578,13.9658705690361,14.5123564891014,15.3157231753025,10.2710449687711,7.35374033800057,17.335244768526,19.9854005521727,19.2551525755089,17.9415020352296,23.0666162900118,20.9375238938545,22.0993957628923,23.4332057801822,24.1228969613576,28.1013277857013,22.8292122111365,21.9916511328624,21.0163809409686,25.1710153429819,18.172070376427,22.1844757699172,21.4592570952589,18.0229556624087,19.2924229851428,17.7690676572521,19.0245091787683,15.5211129748327,19.0125759384206,26.3736867679137,21.828843334848,20.981454745995,22.0984763311632,24.6349577485686,21.2197272079256,20.9840885467875,26.6682033627766,32.445529161293,60.6384012658234,120.442914839255,120.571274522619|short_description=p1@Kcne1l}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66240 | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QZ26 | |||
|association_with_transcript=10bp_to_NM_021487,uc009ult.1_5end | |||
|cluster_id=chrX:138740713..138740730,- | |||
|description=CAGE_peak_1_at_Kcne1l_5end | |||
|id=chrX:138740713..138740730,- | |||
|ontology_enrichment_celltype=CL:0002319!9.96e-11!43;CL:0000221!2.31e-10!44;CL:0000133!2.31e-10!44;CL:0000117!8.72e-09!23;CL:0000337!8.72e-09!23;CL:0000540!5.13e-08!33;CL:0000047!5.13e-08!33;CL:0000031!5.13e-08!33;CL:0000404!5.13e-08!33;CL:0000055!7.24e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.45e-11,43;CL:0000221,2.60e-10,44;CL:0000133,2.60e-10,44;CL:0000117,3.62e-09,23;CL:0000337,3.62e-09,23;CL:0000540,2.34e-08,33;CL:0000047,2.34e-08,33;CL:0000031,2.34e-08,33;CL:0000404,2.34e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.41e-11!73;UBERON:0005743!3.41e-11!73;UBERON:0000073!2.17e-10!75;UBERON:0001016!2.17e-10!75;UBERON:0004121!7.29e-10!102;UBERON:0000924!7.29e-10!102;UBERON:0006601!7.29e-10!102;UBERON:0002346!2.73e-08!71;UBERON:0003075!2.73e-08!71;UBERON:0007284!2.73e-08!71;UBERON:0001049!2.08e-07!52;UBERON:0005068!2.08e-07!52;UBERON:0006241!2.08e-07!52;UBERON:0007135!2.08e-07!52;UBERON:0000468!2.17e-07!333;UBERON:0000033!7.09e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-11,73;UBERON:0001016,1.35e-10,75;UBERON:0004121,1.53e-10,95;UBERON:0000924,1.53e-10,95;UBERON:0006601,1.53e-10,95;UBERON:0002346,1.65e-09,64;UBERON:0003075,1.65e-09,64;UBERON:0007284,1.65e-09,64;UBERON:0000073,4.45e-08,54;UBERON:0010371,4.62e-08,73;UBERON:0001049,1.23e-07,52;UBERON:0005068,1.23e-07,52;UBERON:0006241,1.23e-07,52;UBERON:0007135,1.23e-07,52;UBERON:0010314,3.49e-07,92;UBERON:0002020,6.34e-07,34 | |||
|phase1_expression=1.28119077683835,0.348975407639361,0,0.30246421130683,0,0.503637815735669,0.467225281191051,0,0.422366166455,0.936258105287974,0.856089841127525,0.159544317990673,0.513602189793617,0.0874204024189974,0,0,0.699561878128147,0,0.137114433605739,0.42438965179803,1.36069264241712,0,0.261199789138935,0.159992422793407,0.91763712426868,1.72269589234506,1.7230479846363,0.430942465371778,0.190023419456374,0.504060259519861,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,8.60630478782843,179.434703701107,27.2410866590745,23.1371579898397,20.5780039789283,63.2511283205875,0.335565212115473,1.45072428402269,1.00828139742739,0.257259436035947,1.14613375975503,1.03134418455488,16.589949790487,15.340738398889,15.8457850876545,5.42151251310611,3.55717918444456,0,0,0,70.4060259718251,137.550153305117,8.08778976006126,7.1553147315796,8.83364837675805,104.833911276196,93.8691299044358,14.2089327089347,17.1563393122643,22.0612508786405,13.2139057199266,12.1302971180928,15.2070467923681,12.0016521834476,12.6252948171325,15.6274011167028,25.1264699101243,17.4456409109821,16.8078072554491,50.6761167014708,67.6265483795739,22.1815340532108,0.37863096666592,0.302286240427142,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,1.40444420131752,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0.506719730950197,0,0.79928715803342,0.258937883647172,0.445326417194474,6.41895709034703,4.26251669636998,3.22861696158482,1.65794904607885,3.76283862834255,0.125666591329675,0,0,1.76922110389975,75.8686526253349,32.6845447321382,16.4857586065976,1.86391761218122,6.73395833126558,5.65506108396329,0.255457055208591,0.11981512450592,0,0,10.0359728401231,4.11750542536764,19.9790419859454,2.60736480288415,3.3243009452943,9.3504620051802,6.32740925964255,18.6366035846079,2.11491850037158,0.252722758433675,1.47309299120532,7.54698569183682,14.2539304748753,13.8647839950119,12.6592046982001,19.7986212530364,27.1601087003882,33.7326208415024,9.05461797586555,7.11374376678379,17.5868654556072,15.1317966780996,29.8106196101502,15.2925987074079,18.4573648256748,15.0220959577799,13.733364410476,0,0,0,19.8840741634082,13.8370375388847,10.4435995647389,11.6004920436753,7.47704080640135,6.63348585415727,3.0229412817553,3.48755421819505,2.56883753207773,3.29119699826961,1.31333971263276,1.86458261955468,1.16959989940266,1.53685080703735,0.671032093801859,2.52347938276953,12.8630765474106,0,0.528901133327089,8.95810652247983,11.8440702648824,11.9846739029547,8.47070803418039,7.33847544688072,9.3210556795154,0,3.62337700392824,2.5133520880027,1.98956472041151,1.75467678407208,0,0.432276099749388,0.398282546508734,10.0523987505133,5.59817711787671,9.01661885384643,4.48032921259691,5.81857461502877,5.40045813155453,6.70307293517127,1.62371162777562,1.41298855057237,0.863780147452604,0,1.50160595144485,1.37591296579242,1.34917267430912,0,0.964708639009667,1.52775511068852,0.287696137450811,0.162135226775035,0,0,0.744281895337007,1.5601883655728,0.252578877947112,0.358794827043824,0,0.184753190166605,7.20067364727842,10.7556884451737,6.62005834523234,5.63256595892405,5.69521275302174,2.85652369063216,0.975668239288994,2.52216230569906,2.6575762757853,1.2756381492599,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,1.65562047782839,8.50918126935297,11.3695335994437,0,34.5885170269991,4.41711507182759,2.73307121007647,1.29254038639679,4.30143836314594,4.01037613348309,3.96307143104365,12.9539424535966,14.3205370376543,8.69633111482352,9.96096080907602,0.567760340833074,17.2723635557238,18.0804524882469,1.15479086080775,0,6.5550771761845,5.74414758233027,4.52652191414155,5.61073596473468,5.53383266299069,4.13485269069154,3.27180356529755,9.26893183800275,0.316036757935816,0,0,0.340439605753788,3.78128297465751,3.75140182969988,1.92903331528433,3.19212420556092,3.38900753443934,3.45552943264454,2.74018454203139,0,0.21183207086382,0,0,5.8127193610526,9.71038091343309,3.70054266409723,4.26766339337159,0.874442509889552,15.2048747648618,0.341741761595705,14.2406938894624,12.222838806401,0.376736914009382,0.410082683163076,0,0.169978429993855,0.279902904647316,0.276399947608848,0.954670618015114,23.5670315217946,13.6224042974989,8.8564379473877,7.3180903605064,3.49380101993884,6.87808166562586,4.1326727862668,0.785267825952089,0.129614973291793,0.621339313086926,0.56369293868419,24.9692631893445,18.696809421652,14.1949367491155,13.0451421712508,11.1511042823914,8.44972118249428,6.2498104725096,0.734015410979976,0,1.72818003754719,0,2.8381530140623,2.2596410576262,0.649604114888975,1.79026695667481,1.39076948346885,0.961563596159751,0.738447635872886,0.504832249740738,0.0762068066549998,0.302478555410522,0,0.0962118416403295,0,1.13365191807606,0.221985953374065,0.269141569828427,1.17519231454855,0.386379188064381,0.375364950902364,0,0.857473516316263,1.00314420807073,3.3885110557024,5.52390283808612,5.15605962095457,4.81188910562325,2.05524755931193,2.2661816921691,2.02506750069542,1.35096360967266,2.71885445390523,2.07104124700728,8.09541311156578,13.9658705690361,14.5123564891014,15.3157231753025,10.2710449687711,7.35374033800057,17.335244768526,19.9854005521727,19.2551525755089,17.9415020352296,23.0666162900118,20.9375238938545,22.0993957628923,23.4332057801822,24.1228969613576,28.1013277857013,22.8292122111365,21.9916511328624,21.0163809409686,25.1710153429819,18.172070376427,22.1844757699172,21.4592570952589,18.0229556624087,19.2924229851428,17.7690676572521,19.0245091787683,15.5211129748327,19.0125759384206,26.3736867679137,21.828843334848,20.981454745995,22.0984763311632,24.6349577485686,21.2197272079256,20.9840885467875,26.6682033627766,32.445529161293,60.6384012658234,120.442914839255,120.571274522619 | |||
|short_description=p1@Kcne1l | |||
}} |
Revision as of 01:28, 6 August 2015
Short description: | p1@Kcne1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcne1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | 10bp_to_NM_021487, uc009ult.1_5end |
EntrezGene: | 66240 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.45e-11 | 43 |
ectodermal cell | 2.60e-10 | 44 |
neurectodermal cell | 2.60e-10 | 44 |
CNS neuron (sensu Vertebrata) | 3.62e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.62e-09 | 23 |
neuron | 2.34e-08 | 33 |
neuronal stem cell | 2.34e-08 | 33 |
neuroblast | 2.34e-08 | 33 |
electrically signaling cell | 2.34e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.30e-11 | 73 |
nervous system | 1.35e-10 | 75 |
ectoderm-derived structure | 1.53e-10 | 95 |
ectoderm | 1.53e-10 | 95 |
presumptive ectoderm | 1.53e-10 | 95 |
neurectoderm | 1.65e-09 | 64 |
neural plate | 1.65e-09 | 64 |
presumptive neural plate | 1.65e-09 | 64 |
regional part of nervous system | 4.45e-08 | 54 |
ecto-epithelium | 4.62e-08 | 73 |
neural tube | 1.23e-07 | 52 |
neural rod | 1.23e-07 | 52 |
future spinal cord | 1.23e-07 | 52 |
neural keel | 1.23e-07 | 52 |
structure with developmental contribution from neural crest | 3.49e-07 | 92 |
gray matter | 6.34e-07 | 34 |