FFCP PHASE1:Mm9::chrX:147604216..147604232,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=3736|UniProt=|association_with_transcript=-10bp_to_ENSMUST00000151778_5end|description=CAGE_peak_3_at_ENSMUST00000151778_5end|id=chrX:147604216..147604232,+|ontology_enrichment_celltype=CL:0000117!6.14e-12!23;CL:0000337!6.14e-12!23;CL:0000540!2.47e-08!33;CL:0000047!2.47e-08!33;CL:0000031!2.47e-08!33;CL:0000404!2.47e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.35e-16,23;CL:0000337,6.35e-16,23;CL:0000540,6.55e-10,33;CL:0000047,6.55e-10,33;CL:0000031,6.55e-10,33;CL:0000404,6.55e-10,33;CL:0000393,8.20e-08,39;CL:0000211,8.20e-08,39;CL:0002612,3.67e-07,3;CL:0002613,8.53e-07,3;CL:0002319,9.43e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.92e-10!71;UBERON:0003075!1.92e-10!71;UBERON:0007284!1.92e-10!71;UBERON:0000033!2.49e-10!63;UBERON:0001049!7.87e-10!52;UBERON:0005068!7.87e-10!52;UBERON:0006241!7.87e-10!52;UBERON:0007135!7.87e-10!52;UBERON:0001017!8.11e-10!73;UBERON:0005743!8.11e-10!73;UBERON:0000073!4.09e-09!75;UBERON:0001016!4.09e-09!75;UBERON:0003056!4.64e-09!49;UBERON:0000955!8.30e-09!50;UBERON:0006238!8.30e-09!50;UBERON:0002020!9.94e-09!34;UBERON:0004121!1.73e-08!102;UBERON:0000924!1.73e-08!102;UBERON:0006601!1.73e-08!102;UBERON:0002616!1.78e-08!49;UBERON:0003080!4.41e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.91e-11,34;UBERON:0000073,2.46e-08,54;UBERON:0001017,2.05e-07,73;UBERON:0003528,3.25e-07,29;UBERON:0002791,3.25e-07,29;UBERON:0001893,3.25e-07,29;UBERON:0002257,3.67e-07,3;UBERON:0002346,4.11e-07,64;UBERON:0003075,4.11e-07,64;UBERON:0007284,4.11e-07,64;UBERON:0001016,4.48e-07,75;UBERON:0000369,5.88e-07,5;UBERON:0002435,5.88e-07,5;UBERON:0000204,5.88e-07,5;UBERON:0010082,5.88e-07,5;UBERON:0001049,6.59e-07,52;UBERON:0005068,6.59e-07,52;UBERON:0006241,6.59e-07,52;UBERON:0007135,6.59e-07,52;UBERON:0001948,7.48e-07,5;UBERON:0002315,7.48e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,1.21389876515759,3.1739458756322,2.53532561402472,0,0,0,0,0,0,0,1.76272340924412,0.810035629990144,0.210324961351382,1.42825492201902,0.441737081903227,2.20483438586917,0.958454710182364,3.67687514644008,1.10115880999389,1.27687338085188,0.614426133024974,1.58263545276233,2.28719109006024,5.2091337055676,0,0,0.916789486660861,2.94628585473668,3.98640706237488,3.91438836233131,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.898743836428936,0.915001205637253,5.27748278874031,0.521472960576829,1.02286182932132,1.45451631191692,0.486723789203273,0.305518091550949,0,0,0,0.260240885925407,0.229902104433473,0.720248519221397,1.50704817835715,1.08858398642125,1.0249097622788,0.281105173679186,0.517406741478031,0,0.756424320671277,0.527853372491847,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01327988279209,0,0,0.213288250535234,0.464473343720877,0.77320476793256,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.561086559122548,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,0.642642632843614,0,0.35613120733451,0.162886959353576,0,0,0.971122544619926,0,0.565815239267694,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.643011105094777,0,0.535106452806212,0.493647061806363,0,0.469343416127421,0.63549621259146,0,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.813277868507395,0,0.209088296014469,0,0.134864346384821,0,0,0,0,1.12738587736838,1.49516546043979,0.496375471371293,0.194451188344048,0.904118764344118,0.506868376472335,0.117357238645754,3.3853140059427,6.39642000996836,2.65742532908607,2.30424005006292,0,0.405450430580328,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,1.10992976687032,0.62799699626633,0.503653849092235,0.19318959403219,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,0,1.37016503954128,0,2.02506750069542,0,1.35942722695261,0,1.14166082342594,2.39414924040619,1.70733605754134,0.972426868273176,0.628839487883947,1.2869045591501,0.44449345560323,0.618105171716683,0.962757628775446,0.758091635291392,0,0.943131706930381,0.655490552289177,1.08842759088278,1.43588672389033,0.476293691283074,1.15884325944855,0.964546102318525,1.23625770240992,1.03039244094078,1.37147700954166,0.887379030796687,0.476872379894642,0.726732083161643,1.12931256498397,0.761531471025089,1.46342378298218,1.8414879800649,0.950628796921032,1.68342681497322,0.593175090620871,0.689531376628944,1.22769312950907,1.23949472948773,0.385813221962283,0.999242311751784,1.16965804222704,1.07435527024149,0.382576664137687,0,0|short_description=p3@ENSMUST00000151778}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=3736 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENSMUST00000151778_5end | |||
|cluster_id=chrX:147604216..147604232,+ | |||
|description=CAGE_peak_3_at_ENSMUST00000151778_5end | |||
|id=chrX:147604216..147604232,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.14e-12!23;CL:0000337!6.14e-12!23;CL:0000540!2.47e-08!33;CL:0000047!2.47e-08!33;CL:0000031!2.47e-08!33;CL:0000404!2.47e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.35e-16,23;CL:0000337,6.35e-16,23;CL:0000540,6.55e-10,33;CL:0000047,6.55e-10,33;CL:0000031,6.55e-10,33;CL:0000404,6.55e-10,33;CL:0000393,8.20e-08,39;CL:0000211,8.20e-08,39;CL:0002612,3.67e-07,3;CL:0002613,8.53e-07,3;CL:0002319,9.43e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.92e-10!71;UBERON:0003075!1.92e-10!71;UBERON:0007284!1.92e-10!71;UBERON:0000033!2.49e-10!63;UBERON:0001049!7.87e-10!52;UBERON:0005068!7.87e-10!52;UBERON:0006241!7.87e-10!52;UBERON:0007135!7.87e-10!52;UBERON:0001017!8.11e-10!73;UBERON:0005743!8.11e-10!73;UBERON:0000073!4.09e-09!75;UBERON:0001016!4.09e-09!75;UBERON:0003056!4.64e-09!49;UBERON:0000955!8.30e-09!50;UBERON:0006238!8.30e-09!50;UBERON:0002020!9.94e-09!34;UBERON:0004121!1.73e-08!102;UBERON:0000924!1.73e-08!102;UBERON:0006601!1.73e-08!102;UBERON:0002616!1.78e-08!49;UBERON:0003080!4.41e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.91e-11,34;UBERON:0000073,2.46e-08,54;UBERON:0001017,2.05e-07,73;UBERON:0003528,3.25e-07,29;UBERON:0002791,3.25e-07,29;UBERON:0001893,3.25e-07,29;UBERON:0002257,3.67e-07,3;UBERON:0002346,4.11e-07,64;UBERON:0003075,4.11e-07,64;UBERON:0007284,4.11e-07,64;UBERON:0001016,4.48e-07,75;UBERON:0000369,5.88e-07,5;UBERON:0002435,5.88e-07,5;UBERON:0000204,5.88e-07,5;UBERON:0010082,5.88e-07,5;UBERON:0001049,6.59e-07,52;UBERON:0005068,6.59e-07,52;UBERON:0006241,6.59e-07,52;UBERON:0007135,6.59e-07,52;UBERON:0001948,7.48e-07,5;UBERON:0002315,7.48e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,1.21389876515759,3.1739458756322,2.53532561402472,0,0,0,0,0,0,0,1.76272340924412,0.810035629990144,0.210324961351382,1.42825492201902,0.441737081903227,2.20483438586917,0.958454710182364,3.67687514644008,1.10115880999389,1.27687338085188,0.614426133024974,1.58263545276233,2.28719109006024,5.2091337055676,0,0,0.916789486660861,2.94628585473668,3.98640706237488,3.91438836233131,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.898743836428936,0.915001205637253,5.27748278874031,0.521472960576829,1.02286182932132,1.45451631191692,0.486723789203273,0.305518091550949,0,0,0,0.260240885925407,0.229902104433473,0.720248519221397,1.50704817835715,1.08858398642125,1.0249097622788,0.281105173679186,0.517406741478031,0,0.756424320671277,0.527853372491847,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01327988279209,0,0,0.213288250535234,0.464473343720877,0.77320476793256,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.561086559122548,0,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0,0.445597348164788,0,0,0.292255857911312,0,0.642642632843614,0,0.35613120733451,0.162886959353576,0,0,0.971122544619926,0,0.565815239267694,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.643011105094777,0,0.535106452806212,0.493647061806363,0,0.469343416127421,0.63549621259146,0,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.813277868507395,0,0.209088296014469,0,0.134864346384821,0,0,0,0,1.12738587736838,1.49516546043979,0.496375471371293,0.194451188344048,0.904118764344118,0.506868376472335,0.117357238645754,3.3853140059427,6.39642000996836,2.65742532908607,2.30424005006292,0,0.405450430580328,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,1.10992976687032,0.62799699626633,0.503653849092235,0.19318959403219,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,0,1.37016503954128,0,2.02506750069542,0,1.35942722695261,0,1.14166082342594,2.39414924040619,1.70733605754134,0.972426868273176,0.628839487883947,1.2869045591501,0.44449345560323,0.618105171716683,0.962757628775446,0.758091635291392,0,0.943131706930381,0.655490552289177,1.08842759088278,1.43588672389033,0.476293691283074,1.15884325944855,0.964546102318525,1.23625770240992,1.03039244094078,1.37147700954166,0.887379030796687,0.476872379894642,0.726732083161643,1.12931256498397,0.761531471025089,1.46342378298218,1.8414879800649,0.950628796921032,1.68342681497322,0.593175090620871,0.689531376628944,1.22769312950907,1.23949472948773,0.385813221962283,0.999242311751784,1.16965804222704,1.07435527024149,0.382576664137687,0,0 | |||
|short_description=p3@ENSMUST00000151778 | |||
}} |
Latest revision as of 02:16, 6 August 2015
Short description: | p3@ENSMUST00000151778 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENSMUST00000151778_5end |
Coexpression cluster: | MCL_coexpression_mm9:3736 |
Association with transcript: | -10bp_to_ENSMUST00000151778_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.35e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.35e-16 | 23 |
neuron | 6.55e-10 | 33 |
neuronal stem cell | 6.55e-10 | 33 |
neuroblast | 6.55e-10 | 33 |
electrically signaling cell | 6.55e-10 | 33 |
electrically responsive cell | 8.20e-08 | 39 |
electrically active cell | 8.20e-08 | 39 |
neuron of the ventral spinal cord | 3.67e-07 | 3 |
striatum neuron | 8.53e-07 | 3 |
neural cell | 9.43e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.91e-11 | 34 |
regional part of nervous system | 2.46e-08 | 54 |
central nervous system | 2.05e-07 | 73 |
brain grey matter | 3.25e-07 | 29 |
regional part of telencephalon | 3.25e-07 | 29 |
telencephalon | 3.25e-07 | 29 |
ventral horn of spinal cord | 3.67e-07 | 3 |
neurectoderm | 4.11e-07 | 64 |
neural plate | 4.11e-07 | 64 |
presumptive neural plate | 4.11e-07 | 64 |
nervous system | 4.48e-07 | 75 |
corpus striatum | 5.88e-07 | 5 |
striatum | 5.88e-07 | 5 |
ventral part of telencephalon | 5.88e-07 | 5 |
future corpus striatum | 5.88e-07 | 5 |
neural tube | 6.59e-07 | 52 |
neural rod | 6.59e-07 | 52 |
future spinal cord | 6.59e-07 | 52 |
neural keel | 6.59e-07 | 52 |
regional part of spinal cord | 7.48e-07 | 5 |
gray matter of spinal cord | 7.48e-07 | 5 |