FFCP PHASE1:Mm9::chrX:147955529..147955540,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:147955529..147955540,-|id=chrX:147955529..147955540,-|ontology_enrichment_celltype=CL:0000034!1.79e-10!97;CL:0000144!8.14e-10!121;CL:0000012!8.14e-10!121;CL:0000063!6.12e-09!66;CL:0000723!3.29e-08!91;CL:0000048!3.29e-08!91;CL:0002320!1.47e-07!46;CL:0000134!1.47e-07!46;CL:0002371!2.36e-07!118;CL:0000084!3.06e-07!11;CL:0000827!3.06e-07!11;CL:0000988!4.11e-07!32;CL:0002032!4.11e-07!32;CL:0000037!4.11e-07!32;CL:0000566!4.11e-07!32;CL:0000837!4.11e-07!32|ontology_enrichment_celltype_v019_2=CL:0000057,4.80e-08,1;CL:0000632,4.80e-08,1;CL:0000213,6.57e-08,1;CL:0002078,6.57e-08,1;CL:0000115,6.57e-08,1;CL:0002262,6.57e-08,1;CL:1000398,6.57e-08,1;CL:0000815,8.96e-08,1;CL:0000792,8.96e-08,1;CL:0000355,1.38e-07,9|ontology_enrichment_disease=DOID:0060100!5.06e-09!3;DOID:4045!5.06e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.30e-21,3;DOID:4045,1.30e-21,3;DOID:0050686,4.04e-11,6|ontology_enrichment_uberon=UBERON:0002384!1.47e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002394,6.57e-08,1;UBERON:0001281,6.57e-08,1;UBERON:0000353,6.57e-08,1;UBERON:0003497,6.57e-08,1;UBERON:0003909,6.57e-08,1;UBERON:0003928,6.57e-08,1;UBERON:0003835,6.57e-08,1;UBERON:0003513,6.57e-08,1;UBERON:0001280,6.57e-08,1;UBERON:0004647,6.57e-08,1;UBERON:0002294,6.57e-08,1;UBERON:0001173,6.57e-08,1;UBERON:0004912,6.57e-08,1;UBERON:0005171,6.57e-08,1;UBERON:0001134,1.38e-07,9;UBERON:0002036,1.38e-07,9;UBERON:0002385,1.38e-07,9;UBERON:0000486,1.38e-07,9;UBERON:0007503,1.38e-07,9;UBERON:0001015,1.38e-07,9;UBERON:0002329,1.38e-07,9;UBERON:0003082,1.38e-07,9;UBERON:0003059,1.38e-07,9;UBERON:0007282,1.38e-07,9;UBERON:0004290,1.38e-07,9;UBERON:0009618,1.38e-07,9;UBERON:0000383,7.08e-07,10|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0,0,0,0,0.513602189793617,0.699363219351979,0,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0,0.408338712524738,7.11503772252743,6.2506827561904,8.37637990358077,29.4115744015507,11.6117732442936,4.85510353031154,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0.257259436035947,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,1.73918693221007,2.58127163094416,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838705871541442,4.19931911695385,1.01656181658452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,2.37917468950219,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:147955529..147955540,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:147955529..147955540,- | |||
|description=CAGE_peak_at_chrX:147955529..147955540,- | |||
|id=chrX:147955529..147955540,- | |||
|ontology_enrichment_celltype=CL:0000034!1.79e-10!97;CL:0000144!8.14e-10!121;CL:0000012!8.14e-10!121;CL:0000063!6.12e-09!66;CL:0000723!3.29e-08!91;CL:0000048!3.29e-08!91;CL:0002320!1.47e-07!46;CL:0000134!1.47e-07!46;CL:0002371!2.36e-07!118;CL:0000084!3.06e-07!11;CL:0000827!3.06e-07!11;CL:0000988!4.11e-07!32;CL:0002032!4.11e-07!32;CL:0000037!4.11e-07!32;CL:0000566!4.11e-07!32;CL:0000837!4.11e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.80e-08,1;CL:0000632,4.80e-08,1;CL:0000213,6.57e-08,1;CL:0002078,6.57e-08,1;CL:0000115,6.57e-08,1;CL:0002262,6.57e-08,1;CL:1000398,6.57e-08,1;CL:0000815,8.96e-08,1;CL:0000792,8.96e-08,1;CL:0000355,1.38e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!5.06e-09!3;DOID:4045!5.06e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.30e-21,3;DOID:4045,1.30e-21,3;DOID:0050686,4.04e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.47e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,6.57e-08,1;UBERON:0001281,6.57e-08,1;UBERON:0000353,6.57e-08,1;UBERON:0003497,6.57e-08,1;UBERON:0003909,6.57e-08,1;UBERON:0003928,6.57e-08,1;UBERON:0003835,6.57e-08,1;UBERON:0003513,6.57e-08,1;UBERON:0001280,6.57e-08,1;UBERON:0004647,6.57e-08,1;UBERON:0002294,6.57e-08,1;UBERON:0001173,6.57e-08,1;UBERON:0004912,6.57e-08,1;UBERON:0005171,6.57e-08,1;UBERON:0001134,1.38e-07,9;UBERON:0002036,1.38e-07,9;UBERON:0002385,1.38e-07,9;UBERON:0000486,1.38e-07,9;UBERON:0007503,1.38e-07,9;UBERON:0001015,1.38e-07,9;UBERON:0002329,1.38e-07,9;UBERON:0003082,1.38e-07,9;UBERON:0003059,1.38e-07,9;UBERON:0007282,1.38e-07,9;UBERON:0004290,1.38e-07,9;UBERON:0009618,1.38e-07,9;UBERON:0000383,7.08e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0,0,0,0,0.513602189793617,0.699363219351979,0,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0,0.408338712524738,7.11503772252743,6.2506827561904,8.37637990358077,29.4115744015507,11.6117732442936,4.85510353031154,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0.257259436035947,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,1.73918693221007,2.58127163094416,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838705871541442,4.19931911695385,1.01656181658452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,2.37917468950219,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:147955529..147955540,- | |||
}} |
Latest revision as of 02:19, 6 August 2015
Short description: | p@chrX:147955529..147955540, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:147955529..147955540, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.80e-08 | 1 |
hepatic stellate cell | 4.80e-08 | 1 |
lining cell | 6.57e-08 | 1 |
meso-epithelial cell | 6.57e-08 | 1 |
endothelial cell | 6.57e-08 | 1 |
endothelial cell of sinusoid | 6.57e-08 | 1 |
endothelial cell of hepatic sinusoid | 6.57e-08 | 1 |
regulatory T cell | 8.96e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.96e-08 | 1 |
multi-potent skeletal muscle stem cell | 1.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 6.57e-08 | 1 |
hepatic sinusoid | 6.57e-08 | 1 |
parenchyma | 6.57e-08 | 1 |
abdomen blood vessel | 6.57e-08 | 1 |
sinusoid | 6.57e-08 | 1 |
digestive system duct | 6.57e-08 | 1 |
abdominal segment blood vessel | 6.57e-08 | 1 |
trunk blood vessel | 6.57e-08 | 1 |
liver parenchyma | 6.57e-08 | 1 |
liver lobule | 6.57e-08 | 1 |
biliary system | 6.57e-08 | 1 |
biliary tree | 6.57e-08 | 1 |
biliary bud | 6.57e-08 | 1 |
hepatic duct | 6.57e-08 | 1 |
skeletal muscle tissue | 1.38e-07 | 9 |
striated muscle tissue | 1.38e-07 | 9 |
muscle tissue | 1.38e-07 | 9 |
multilaminar epithelium | 1.38e-07 | 9 |
epithelial vesicle | 1.38e-07 | 9 |
musculature | 1.38e-07 | 9 |
somite | 1.38e-07 | 9 |
myotome | 1.38e-07 | 9 |
presomitic mesoderm | 1.38e-07 | 9 |
presumptive segmental plate | 1.38e-07 | 9 |
dermomyotome | 1.38e-07 | 9 |
trunk paraxial mesoderm | 1.38e-07 | 9 |
musculature of body | 7.08e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.30e-21 | 3 |
muscle cancer | 1.30e-21 | 3 |
organ system cancer | 4.04e-11 | 6 |