FFCP PHASE1:Mm9::chr19:11560491..11560507,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=450|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:11560491..11560507,+|id=chr19:11560491..11560507,+|ontology_enrichment_celltype=CL:0000791!2.94e-11!9;CL:0000789!2.94e-11!9;CL:0002420!2.94e-11!9;CL:0002419!2.94e-11!9;CL:0000790!2.94e-11!9;CL:0000624!3.36e-10!8;CL:0000838!9.45e-10!12;CL:0002031!1.05e-09!25;CL:0000542!9.85e-09!13;CL:0000051!9.85e-09!13;CL:0000084!1.19e-08!11;CL:0000827!1.19e-08!11;CL:0000893!4.82e-08!6;CL:0002489!4.82e-08!6;CL:0000898!4.82e-08!6;CL:0000809!4.82e-08!6;CL:0000810!4.82e-08!6;CL:0000895!4.82e-08!6;CL:0000808!4.82e-08!6;CL:0000894!4.82e-08!6;CL:0000806!4.82e-08!6;CL:0000807!4.82e-08!6;CL:0000805!4.82e-08!6;CL:0002425!4.82e-08!6;CL:0002436!4.82e-08!6;CL:0002427!4.82e-08!6;CL:0002428!4.82e-08!6;CL:0002429!4.82e-08!6;CL:0002433!4.82e-08!6;CL:0002431!4.82e-08!6;CL:0002432!4.82e-08!6;CL:0000553!1.19e-07!6;CL:0000556!1.19e-07!6|ontology_enrichment_celltype_v019_2=CL:0002031,1.21e-25,25;CL:0000791,1.39e-24,9;CL:0000789,1.39e-24,9;CL:0002420,1.39e-24,9;CL:0002419,1.39e-24,9;CL:0000790,1.39e-24,9;CL:0000838,1.91e-22,12;CL:0000624,4.59e-22,8;CL:0000542,1.49e-20,13;CL:0000051,1.49e-20,13;CL:0000084,8.64e-20,11;CL:0000827,8.64e-20,11;CL:0000988,3.36e-19,32;CL:0002032,3.36e-19,32;CL:0000037,3.36e-19,32;CL:0000837,3.36e-19,32;CL:0000893,6.03e-17,6;CL:0002489,6.03e-17,6;CL:0000898,6.03e-17,6;CL:0000809,6.03e-17,6;CL:0000810,6.03e-17,6;CL:0000895,6.03e-17,6;CL:0000808,6.03e-17,6;CL:0000894,6.03e-17,6;CL:0000806,6.03e-17,6;CL:0000807,6.03e-17,6;CL:0000805,6.03e-17,6;CL:0002425,6.03e-17,6;CL:0002436,6.03e-17,6;CL:0002427,6.03e-17,6;CL:0002428,6.03e-17,6;CL:0002429,6.03e-17,6;CL:0002433,6.03e-17,6;CL:0002431,6.03e-17,6;CL:0002432,6.03e-17,6;CL:0000553,5.09e-16,6;CL:0000556,5.09e-16,6;CL:0000738,3.23e-15,17;CL:0002087,3.23e-15,17;CL:0002320,3.30e-12,46;CL:0000134,3.30e-12,46;CL:0000050,1.92e-10,9;CL:0000219,7.49e-10,54;CL:0002027,2.88e-08,3;CL:0002006,2.88e-08,3;CL:0002024,2.88e-08,3;CL:0000839,5.23e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.84e-11!48;UBERON:0002390!6.96e-09!45;UBERON:0003061!6.96e-09!45;UBERON:0002405!9.89e-09!70;UBERON:0004177!1.02e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.36e-18,48;UBERON:0002405,3.36e-18,48;UBERON:0002390,1.06e-13,45;UBERON:0003061,1.06e-13,45;UBERON:0002384,3.30e-12,46;UBERON:0004177,3.78e-09,29;UBERON:0005057,3.78e-09,29;UBERON:0003081,9.10e-09,87;UBERON:0002465,1.34e-08,3;UBERON:0000077,3.34e-07,35;UBERON:0002106,5.01e-07,6;UBERON:0004457,5.01e-07,6;UBERON:0000042,5.01e-07,6;UBERON:0004854,5.01e-07,6;UBERON:0009034,5.01e-07,6;UBERON:0002095,5.01e-07,6;UBERON:0004782,5.01e-07,6;UBERON:0003281,5.01e-07,6;UBERON:0009664,5.01e-07,6;UBERON:0002296,5.01e-07,6;UBERON:0005602,5.01e-07,6;UBERON:0001179,5.01e-07,6;UBERON:0006293,5.01e-07,6;UBERON:0000065,7.52e-07,41|phase1_expression=0,0,0,0,0,0,0,68.1771147771523,129.666413101685,107.201553055473,23.7992975833452,15.4757988450953,86.7987700751213,38.9894994788728,3.99731714178795,12.9584171129489,6.29605690315332,77.9191548434847,67.186072466812,70.873071850271,0.510259740906419,0,0,6.87967418011649,8.94696196161963,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,204.359214178323,63.106506354987,43.0200062902354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.37020655662872,15.5362730188303,0.29688427812965,0,0,0,0,0.117588707135705,0,1.73036477414062,0.86759614151947,0.884610551949874,0,1.98757366614354,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0,0.324482526135515,0,1.61729061793121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0.402619256281115,0.630869845692382,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.763877555344259,0.863088412352432,0.648540907100142,0,0,0,0,0,0.358794827043824,0.482443521363367,6.46636165583116,0,0,0,0,0,0,0,1.26108115284953,0.8858587585951,0.478364305972461,3.27726629431476,5.00786447411097,4.19482269886384,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0.304464949114599,0.704015124191131,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,0.18542530201051,4.27177201994632,0,0.185194527369712,4.52084296811258,8.20165366326151,9.60868327467395,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0,0.504832249740738,0.228620419965,0.806609481094724,0.682205165178267,0.288635524920988,1.5193997283604,0,0,0,0,0,0,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,1.15933917810211|short_description=p@chr19:11560491..11560507,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=450 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:11560491..11560507,+ | |||
|description=CAGE_peak_at_chr19:11560491..11560507,+ | |||
|id=chr19:11560491..11560507,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.94e-11!9;CL:0000789!2.94e-11!9;CL:0002420!2.94e-11!9;CL:0002419!2.94e-11!9;CL:0000790!2.94e-11!9;CL:0000624!3.36e-10!8;CL:0000838!9.45e-10!12;CL:0002031!1.05e-09!25;CL:0000542!9.85e-09!13;CL:0000051!9.85e-09!13;CL:0000084!1.19e-08!11;CL:0000827!1.19e-08!11;CL:0000893!4.82e-08!6;CL:0002489!4.82e-08!6;CL:0000898!4.82e-08!6;CL:0000809!4.82e-08!6;CL:0000810!4.82e-08!6;CL:0000895!4.82e-08!6;CL:0000808!4.82e-08!6;CL:0000894!4.82e-08!6;CL:0000806!4.82e-08!6;CL:0000807!4.82e-08!6;CL:0000805!4.82e-08!6;CL:0002425!4.82e-08!6;CL:0002436!4.82e-08!6;CL:0002427!4.82e-08!6;CL:0002428!4.82e-08!6;CL:0002429!4.82e-08!6;CL:0002433!4.82e-08!6;CL:0002431!4.82e-08!6;CL:0002432!4.82e-08!6;CL:0000553!1.19e-07!6;CL:0000556!1.19e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.21e-25,25;CL:0000791,1.39e-24,9;CL:0000789,1.39e-24,9;CL:0002420,1.39e-24,9;CL:0002419,1.39e-24,9;CL:0000790,1.39e-24,9;CL:0000838,1.91e-22,12;CL:0000624,4.59e-22,8;CL:0000542,1.49e-20,13;CL:0000051,1.49e-20,13;CL:0000084,8.64e-20,11;CL:0000827,8.64e-20,11;CL:0000988,3.36e-19,32;CL:0002032,3.36e-19,32;CL:0000037,3.36e-19,32;CL:0000837,3.36e-19,32;CL:0000893,6.03e-17,6;CL:0002489,6.03e-17,6;CL:0000898,6.03e-17,6;CL:0000809,6.03e-17,6;CL:0000810,6.03e-17,6;CL:0000895,6.03e-17,6;CL:0000808,6.03e-17,6;CL:0000894,6.03e-17,6;CL:0000806,6.03e-17,6;CL:0000807,6.03e-17,6;CL:0000805,6.03e-17,6;CL:0002425,6.03e-17,6;CL:0002436,6.03e-17,6;CL:0002427,6.03e-17,6;CL:0002428,6.03e-17,6;CL:0002429,6.03e-17,6;CL:0002433,6.03e-17,6;CL:0002431,6.03e-17,6;CL:0002432,6.03e-17,6;CL:0000553,5.09e-16,6;CL:0000556,5.09e-16,6;CL:0000738,3.23e-15,17;CL:0002087,3.23e-15,17;CL:0002320,3.30e-12,46;CL:0000134,3.30e-12,46;CL:0000050,1.92e-10,9;CL:0000219,7.49e-10,54;CL:0002027,2.88e-08,3;CL:0002006,2.88e-08,3;CL:0002024,2.88e-08,3;CL:0000839,5.23e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.84e-11!48;UBERON:0002390!6.96e-09!45;UBERON:0003061!6.96e-09!45;UBERON:0002405!9.89e-09!70;UBERON:0004177!1.02e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.36e-18,48;UBERON:0002405,3.36e-18,48;UBERON:0002390,1.06e-13,45;UBERON:0003061,1.06e-13,45;UBERON:0002384,3.30e-12,46;UBERON:0004177,3.78e-09,29;UBERON:0005057,3.78e-09,29;UBERON:0003081,9.10e-09,87;UBERON:0002465,1.34e-08,3;UBERON:0000077,3.34e-07,35;UBERON:0002106,5.01e-07,6;UBERON:0004457,5.01e-07,6;UBERON:0000042,5.01e-07,6;UBERON:0004854,5.01e-07,6;UBERON:0009034,5.01e-07,6;UBERON:0002095,5.01e-07,6;UBERON:0004782,5.01e-07,6;UBERON:0003281,5.01e-07,6;UBERON:0009664,5.01e-07,6;UBERON:0002296,5.01e-07,6;UBERON:0005602,5.01e-07,6;UBERON:0001179,5.01e-07,6;UBERON:0006293,5.01e-07,6;UBERON:0000065,7.52e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,68.1771147771523,129.666413101685,107.201553055473,23.7992975833452,15.4757988450953,86.7987700751213,38.9894994788728,3.99731714178795,12.9584171129489,6.29605690315332,77.9191548434847,67.186072466812,70.873071850271,0.510259740906419,0,0,6.87967418011649,8.94696196161963,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,204.359214178323,63.106506354987,43.0200062902354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.37020655662872,15.5362730188303,0.29688427812965,0,0,0,0,0.117588707135705,0,1.73036477414062,0.86759614151947,0.884610551949874,0,1.98757366614354,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0,0.324482526135515,0,1.61729061793121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.439100230582101,0.402619256281115,0.630869845692382,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.763877555344259,0.863088412352432,0.648540907100142,0,0,0,0,0,0.358794827043824,0.482443521363367,6.46636165583116,0,0,0,0,0,0,0,1.26108115284953,0.8858587585951,0.478364305972461,3.27726629431476,5.00786447411097,4.19482269886384,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0.304464949114599,0.704015124191131,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,0.18542530201051,4.27177201994632,0,0.185194527369712,4.52084296811258,8.20165366326151,9.60868327467395,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0.120195449519969,0,0.504832249740738,0.228620419965,0.806609481094724,0.682205165178267,0.288635524920988,1.5193997283604,0,0,0,0,0,0,0.183151624267265,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,1.15933917810211 | |||
|short_description=p@chr19:11560491..11560507,+ | |||
}} |
Latest revision as of 07:44, 6 August 2015
Short description: | p@chr19:11560491..11560507, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:11560491..11560507, + |
Coexpression cluster: | MCL_coexpression_mm9:450 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.36e-18 | 48 |
immune system | 3.36e-18 | 48 |
hematopoietic system | 1.06e-13 | 45 |
blood island | 1.06e-13 | 45 |
connective tissue | 3.30e-12 | 46 |
hemopoietic organ | 3.78e-09 | 29 |
immune organ | 3.78e-09 | 29 |
lateral plate mesoderm | 9.10e-09 | 87 |
lymphoid system | 1.34e-08 | 3 |
mixed endoderm/mesoderm-derived structure | 3.34e-07 | 35 |
spleen | 5.01e-07 | 6 |
cavity lining | 5.01e-07 | 6 |
serous membrane | 5.01e-07 | 6 |
gastrointestinal system mesentery | 5.01e-07 | 6 |
stomach region | 5.01e-07 | 6 |
mesentery | 5.01e-07 | 6 |
gastrointestinal system serosa | 5.01e-07 | 6 |
mesentery of stomach | 5.01e-07 | 6 |
gut mesentery | 5.01e-07 | 6 |
dorsal mesentery | 5.01e-07 | 6 |
dorsal mesogastrium | 5.01e-07 | 6 |
peritoneal cavity | 5.01e-07 | 6 |
spleen primordium | 5.01e-07 | 6 |
respiratory tract | 7.52e-07 | 41 |