FFCP PHASE1:Mm9::chrX:7455424..7455440,+: Difference between revisions
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{{FFCP|EntrezGene=18715|HGNC=|MCL_coexpression_id=974|UniProt=F6WGR1,Q62070,Q8R1Z0|association_with_transcript=0bp_to_ENSMUST00000033495,NM_138606,uc009smz.1_5end|description=CAGE_peak_1_at_Pim2_5end|id=chrX:7455424..7455440,+|ontology_enrichment_celltype=CL:0002031!2.49e-10!25;CL:0000838!9.33e-09!12;CL:0000738!1.42e-08!17;CL:0002087!1.42e-08!17;CL:0000084!4.22e-08!11;CL:0000827!4.22e-08!11;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000988!1.53e-07!32;CL:0002032!1.53e-07!32;CL:0000037!1.53e-07!32;CL:0000566!1.53e-07!32;CL:0000837!1.53e-07!32|ontology_enrichment_celltype_v019_2=CL:0002031,2.14e-10,25;CL:0000838,9.24e-09,12;CL:0000738,1.41e-08,17;CL:0002087,1.41e-08,17;CL:0000084,4.18e-08,11;CL:0000827,4.18e-08,11;CL:0000542,1.26e-07,13;CL:0000051,1.26e-07,13;CL:0000988,1.37e-07,32;CL:0002032,1.37e-07,32;CL:0000037,1.37e-07,32;CL:0000837,1.37e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.40e-17!73;UBERON:0005743!9.40e-17!73;UBERON:0001049!5.76e-16!52;UBERON:0005068!5.76e-16!52;UBERON:0006241!5.76e-16!52;UBERON:0007135!5.76e-16!52;UBERON:0000073!1.24e-15!75;UBERON:0001016!1.24e-15!75;UBERON:0000955!1.32e-15!50;UBERON:0006238!1.32e-15!50;UBERON:0002616!4.18e-15!49;UBERON:0007811!1.78e-13!86;UBERON:0002346!4.50e-13!71;UBERON:0003075!4.50e-13!71;UBERON:0007284!4.50e-13!71;UBERON:0003080!9.65e-12!40;UBERON:0000033!1.69e-11!63;UBERON:0002780!2.68e-11!39;UBERON:0001890!2.68e-11!39;UBERON:0006240!2.68e-11!39;UBERON:0002020!3.16e-11!34;UBERON:0003056!2.74e-10!49;UBERON:0000153!2.94e-10!94;UBERON:0002791!2.11e-09!29;UBERON:0003528!2.11e-09!29;UBERON:0001893!2.11e-09!29;UBERON:0004121!3.37e-09!102;UBERON:0000924!3.37e-09!102;UBERON:0006601!3.37e-09!102;UBERON:0000064!3.71e-08!99;UBERON:0002619!2.45e-07!17;UBERON:0002021!3.98e-07!10;UBERON:0000411!3.98e-07!10;UBERON:0001950!3.98e-07!10;UBERON:0000956!6.31e-07!21;UBERON:0001869!6.31e-07!21;UBERON:0000203!6.31e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.16e-17,54;UBERON:0001017,9.21e-17,73;UBERON:0001049,5.65e-16,52;UBERON:0005068,5.65e-16,52;UBERON:0006241,5.65e-16,52;UBERON:0007135,5.65e-16,52;UBERON:0001016,1.21e-15,75;UBERON:0000955,4.18e-14,47;UBERON:0006238,4.18e-14,47;UBERON:0002346,5.26e-14,64;UBERON:0003075,5.26e-14,64;UBERON:0007284,5.26e-14,64;UBERON:0002616,1.29e-13,46;UBERON:0003080,9.52e-12,40;UBERON:0002780,2.65e-11,39;UBERON:0001890,2.65e-11,39;UBERON:0006240,2.65e-11,39;UBERON:0002020,3.12e-11,34;UBERON:0003056,2.71e-10,49;UBERON:0010371,1.33e-09,73;UBERON:0004121,1.88e-09,95;UBERON:0000924,1.88e-09,95;UBERON:0006601,1.88e-09,95;UBERON:0003528,2.08e-09,29;UBERON:0002791,2.08e-09,29;UBERON:0001893,2.08e-09,29;UBERON:0011216,1.52e-08,194;UBERON:0002619,2.43e-07,17;UBERON:0002021,3.95e-07,10;UBERON:0000411,3.95e-07,10;UBERON:0001950,3.95e-07,10;UBERON:0000956,6.26e-07,21;UBERON:0001869,6.26e-07,21;UBERON:0000203,6.26e-07,21|phase1_expression=2.24208385946712,2.09385244583617,2.72999543633722,1.51232105653415,4.00716583957078,7.89032577985882,7.94282978024787,24.2751848070163,77.0114310169617,75.3687774756819,13.0125655851384,17.2307863429927,42.2865802930078,52.7145026586554,8.99396356902289,8.30148596298286,2.79824751251259,38.3286530910259,37.9806981087896,30.1316652776601,7.99406927420056,167.702416578295,213.661427515649,8.95957567643077,9.86459908588831,1.72269589234506,1.29228598847722,3.23206849028834,2.28028103347649,4.78857246543868,3.10422714917427,12.065582795733,9.22597181376855,0,4.91047753577167,3.65716219788683,5.71674197534634,2.09265815368454,2.3440060335714,2.09409497589519,2.35292595212406,2.04913645487534,0.971020706062307,0.377690453926732,0.608261587317087,0.183546752161682,3.12956537739216,15.4797861030117,8.78744730937887,8.55491555926847,3.91961980551015,7.18762821824858,51.1736948476096,79.7898356212479,136.45408245184,0.514518872071894,0.85960031981627,0.515672092277442,4.65327859977075,8.99284664762456,5.70448263155561,0.677689064138264,3.55717918444456,6.29929802096979,10.8775299882367,6.3943210345149,18.8748069626595,43.8008868066572,2.69592992002042,3.78016627328734,4.41682418837902,17.424710048632,16.565140571371,3.91970557487853,2.97120960156533,8.27296907949019,19.82085857989,20.8130361078856,21.9657342556428,8.83638127792299,8.32537556781928,4.68822033501084,24.5681039121215,24.1987922313622,25.9757021220577,10.9012576625257,9.39653093274079,13.7935589910722,2.65041676666144,1.51143120213571,4.34796733052517,4.30211938490693,7.47968467078526,2.69851595818909,3.89865850468601,7.6164570806547,4.63466586434781,0,0,0,2.25349471642689,0,0,0,2.81438353314578,2.02687892380079,4.54972000513305,5.48082622651488,26.4116641320115,8.60964406575984,3.12273588179045,3.34912026143355,2.99800146432876,4.52167921657868,2.3517741427141,4.02133092254962,0.988779870937496,2.60278842455841,5.30766331169925,0.808834249737046,4.41683036920787,4.363877278217,3.72783522436244,18.737971008739,19.0596503200244,7.15279754584056,4.55297473122497,2.99951365496704,5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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18715 | |||
|HGNC= | |||
|MCL_coexpression_id=974 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6WGR1,uniprot:Q62070,uniprot:Q8R1Z0 | |||
|association_with_transcript=0bp_to_ENSMUST00000033495,NM_138606,uc009smz.1_5end | |||
|cluster_id=chrX:7455424..7455440,+ | |||
|description=CAGE_peak_1_at_Pim2_5end | |||
|id=chrX:7455424..7455440,+ | |||
|ontology_enrichment_celltype=CL:0002031!2.49e-10!25;CL:0000838!9.33e-09!12;CL:0000738!1.42e-08!17;CL:0002087!1.42e-08!17;CL:0000084!4.22e-08!11;CL:0000827!4.22e-08!11;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000988!1.53e-07!32;CL:0002032!1.53e-07!32;CL:0000037!1.53e-07!32;CL:0000566!1.53e-07!32;CL:0000837!1.53e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.14e-10,25;CL:0000838,9.24e-09,12;CL:0000738,1.41e-08,17;CL:0002087,1.41e-08,17;CL:0000084,4.18e-08,11;CL:0000827,4.18e-08,11;CL:0000542,1.26e-07,13;CL:0000051,1.26e-07,13;CL:0000988,1.37e-07,32;CL:0002032,1.37e-07,32;CL:0000037,1.37e-07,32;CL:0000837,1.37e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.40e-17!73;UBERON:0005743!9.40e-17!73;UBERON:0001049!5.76e-16!52;UBERON:0005068!5.76e-16!52;UBERON:0006241!5.76e-16!52;UBERON:0007135!5.76e-16!52;UBERON:0000073!1.24e-15!75;UBERON:0001016!1.24e-15!75;UBERON:0000955!1.32e-15!50;UBERON:0006238!1.32e-15!50;UBERON:0002616!4.18e-15!49;UBERON:0007811!1.78e-13!86;UBERON:0002346!4.50e-13!71;UBERON:0003075!4.50e-13!71;UBERON:0007284!4.50e-13!71;UBERON:0003080!9.65e-12!40;UBERON:0000033!1.69e-11!63;UBERON:0002780!2.68e-11!39;UBERON:0001890!2.68e-11!39;UBERON:0006240!2.68e-11!39;UBERON:0002020!3.16e-11!34;UBERON:0003056!2.74e-10!49;UBERON:0000153!2.94e-10!94;UBERON:0002791!2.11e-09!29;UBERON:0003528!2.11e-09!29;UBERON:0001893!2.11e-09!29;UBERON:0004121!3.37e-09!102;UBERON:0000924!3.37e-09!102;UBERON:0006601!3.37e-09!102;UBERON:0000064!3.71e-08!99;UBERON:0002619!2.45e-07!17;UBERON:0002021!3.98e-07!10;UBERON:0000411!3.98e-07!10;UBERON:0001950!3.98e-07!10;UBERON:0000956!6.31e-07!21;UBERON:0001869!6.31e-07!21;UBERON:0000203!6.31e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.16e-17,54;UBERON:0001017,9.21e-17,73;UBERON:0001049,5.65e-16,52;UBERON:0005068,5.65e-16,52;UBERON:0006241,5.65e-16,52;UBERON:0007135,5.65e-16,52;UBERON:0001016,1.21e-15,75;UBERON:0000955,4.18e-14,47;UBERON:0006238,4.18e-14,47;UBERON:0002346,5.26e-14,64;UBERON:0003075,5.26e-14,64;UBERON:0007284,5.26e-14,64;UBERON:0002616,1.29e-13,46;UBERON:0003080,9.52e-12,40;UBERON:0002780,2.65e-11,39;UBERON:0001890,2.65e-11,39;UBERON:0006240,2.65e-11,39;UBERON:0002020,3.12e-11,34;UBERON:0003056,2.71e-10,49;UBERON:0010371,1.33e-09,73;UBERON:0004121,1.88e-09,95;UBERON:0000924,1.88e-09,95;UBERON:0006601,1.88e-09,95;UBERON:0003528,2.08e-09,29;UBERON:0002791,2.08e-09,29;UBERON:0001893,2.08e-09,29;UBERON:0011216,1.52e-08,194;UBERON:0002619,2.43e-07,17;UBERON:0002021,3.95e-07,10;UBERON:0000411,3.95e-07,10;UBERON:0001950,3.95e-07,10;UBERON:0000956,6.26e-07,21;UBERON:0001869,6.26e-07,21;UBERON:0000203,6.26e-07,21 | |||
|phase1_expression=2.24208385946712,2.09385244583617,2.72999543633722,1.51232105653415,4.00716583957078,7.89032577985882,7.94282978024787,24.2751848070163,77.0114310169617,75.3687774756819,13.0125655851384,17.2307863429927,42.2865802930078,52.7145026586554,8.99396356902289,8.30148596298286,2.79824751251259,38.3286530910259,37.9806981087896,30.1316652776601,7.99406927420056,167.702416578295,213.661427515649,8.95957567643077,9.86459908588831,1.72269589234506,1.29228598847722,3.23206849028834,2.28028103347649,4.78857246543868,3.10422714917427,12.065582795733,9.22597181376855,0,4.91047753577167,3.65716219788683,5.71674197534634,2.09265815368454,2.3440060335714,2.09409497589519,2.35292595212406,2.04913645487534,0.971020706062307,0.377690453926732,0.608261587317087,0.183546752161682,3.12956537739216,15.4797861030117,8.78744730937887,8.55491555926847,3.91961980551015,7.18762821824858,51.1736948476096,79.7898356212479,136.45408245184,0.514518872071894,0.85960031981627,0.515672092277442,4.65327859977075,8.99284664762456,5.70448263155561,0.677689064138264,3.55717918444456,6.29929802096979,10.8775299882367,6.3943210345149,18.8748069626595,43.8008868066572,2.69592992002042,3.78016627328734,4.41682418837902,17.424710048632,16.565140571371,3.91970557487853,2.97120960156533,8.27296907949019,19.82085857989,20.8130361078856,21.9657342556428,8.83638127792299,8.32537556781928,4.68822033501084,24.5681039121215,24.1987922313622,25.9757021220577,10.9012576625257,9.39653093274079,13.7935589910722,2.65041676666144,1.51143120213571,4.34796733052517,4.30211938490693,7.47968467078526,2.69851595818909,3.89865850468601,7.6164570806547,4.63466586434781,0,0,0,2.25349471642689,0,0,0,2.81438353314578,2.02687892380079,4.54972000513305,5.48082622651488,26.4116641320115,8.60964406575984,3.12273588179045,3.34912026143355,2.99800146432876,4.52167921657868,2.3517741427141,4.02133092254962,0.988779870937496,2.60278842455841,5.30766331169925,0.808834249737046,4.41683036920787,4.363877278217,3.72783522436244,18.737971008739,19.0596503200244,7.15279754584056,4.55297473122497,2.99951365496704,5.20987930999565,18.7238299256028,16.4700217014706,7.66491547888473,24.6830534673033,29.6629930503183,23.2722609906707,22.8760180925538,0.81471491080253,6.34475550111474,14.1524744722858,6.10281382070775,3.12289063110489,3.90833577536904,4.50155324513373,3.61691562805716,2.99360596265843,2.43416068541215,3.65436725782942,6.20888089773638,2.58681591519411,0.756424320671277,0.879755620819744,0.43839146485515,0.278047249225598,2.089512999133,2.05782136407943,1.99034266818493,2.1066395619397,3.08817488537658,2.27330799516474,1.86413195281952,2.34526059981096,1.08037236876609,1.89395788468168,2.36117078096885,2.1597395804233,2.55787339225449,1.87791380979733,0.700592054203017,1.15191894939436,2.13417703302824,0.56748166682099,0.730999937126662,1.09775057645525,1.8788898626452,25.2347938276953,7.40913209130848,5.28670052774077,3.17340679996253,2.13288250535234,2.09013004674395,2.70621668776396,5.24377164020691,12.4531704553127,11.6037631928661,3.79623249235609,8.72904460037258,5.27803938480566,2.78539060857611,5.06906626509712,0.898819408654221,4.32276099749388,3.58454291857861,2.84501851429623,3.08470984046268,2.25415471346161,1.62921062276251,1.74557238450863,1.96380295692892,3.41477300470989,4.87113488332687,3.92496819603437,4.56569506510662,2.96452627087149,3.00321190288969,1.76903095601883,2.24862112384854,1.82574109249653,1.68824011826692,1.2731292589071,1.72617682470486,1.29708181420028,2.19649130550465,0,2.60498663367952,2.80833905803104,3.03094653536534,2.33216637578486,7.23665282045051,6.46636165583116,1.13694847062291,2.44447464663039,2.03694102930226,3.98973422090454,3.85264392116176,4.76087281772027,2.53673742215138,3.31033802623001,2.43611158613652,2.87018583583477,5.40748938561935,4.66249451037918,3.47157740595628,3.01582567878545,18.4927932498361,1.96705709207614,1.93155722413313,14.2890025089135,15.589154316763,0,2.01976741763498,2.52406575533005,3.90438744296638,6.67812532971677,3.82350076724083,2.22798674082394,2.26461224631066,2.42886421004937,5.84511715822624,5.92931666919785,20.5645642509957,5.39372323791421,1.6025904330053,0.325773918707152,6.26886467295635,10.619611067197,23.7925023431882,21.4649725444973,15.2770114602277,15.0603965369194,13.2197113615889,9.56184684722418,12.7236805317127,8.55593708123331,7.26884543252377,6.32511651449993,6.18813259489121,23.4903327970114,3.96134406868882,6.07985813778946,3.64372959553707,4.78818630834139,9.45354733290974,7.24015690649332,13.3964577610424,1.17335854031855,2.96564899209348,6.3953235435939,1.81374878235628,0.968786560175433,2.23157822234177,1.90995750405018,3.61109979439135,2.62332752966866,14.0923229527987,10.0813819670733,2.27025554759545,2.59272338317596,4.89757988212197,12.3024804948923,12.1252431799457,12.0684685295637,14.4149995893368,8.56839837587428,8.59203556213602,2.05618395827738,5.08298667817122,2.26811215725783,1.67270636811575,1.74690050996942,3.10187996685088,3.30613822901344,4.973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| |||
|short_description=p1@Pim2 | |||
}} |
Revision as of 10:43, 6 August 2015
Short description: | p1@Pim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:974 |
Association with transcript: | 0bp_to_ENSMUST00000033495, NM_138606, uc009smz.1_5end |
EntrezGene: | 18715 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.14e-10 | 25 |
lymphoid lineage restricted progenitor cell | 9.24e-09 | 12 |
leukocyte | 1.41e-08 | 17 |
nongranular leukocyte | 1.41e-08 | 17 |
T cell | 4.18e-08 | 11 |
pro-T cell | 4.18e-08 | 11 |
lymphocyte | 1.26e-07 | 13 |
common lymphoid progenitor | 1.26e-07 | 13 |
hematopoietic cell | 1.37e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.37e-07 | 32 |
hematopoietic stem cell | 1.37e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.37e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.16e-17 | 54 |
central nervous system | 9.21e-17 | 73 |
neural tube | 5.65e-16 | 52 |
neural rod | 5.65e-16 | 52 |
future spinal cord | 5.65e-16 | 52 |
neural keel | 5.65e-16 | 52 |
nervous system | 1.21e-15 | 75 |
brain | 4.18e-14 | 47 |
future brain | 4.18e-14 | 47 |
neurectoderm | 5.26e-14 | 64 |
neural plate | 5.26e-14 | 64 |
presumptive neural plate | 5.26e-14 | 64 |
regional part of brain | 1.29e-13 | 46 |
anterior neural tube | 9.52e-12 | 40 |
regional part of forebrain | 2.65e-11 | 39 |
forebrain | 2.65e-11 | 39 |
future forebrain | 2.65e-11 | 39 |
gray matter | 3.12e-11 | 34 |
pre-chordal neural plate | 2.71e-10 | 49 |
ecto-epithelium | 1.33e-09 | 73 |
ectoderm-derived structure | 1.88e-09 | 95 |
ectoderm | 1.88e-09 | 95 |
presumptive ectoderm | 1.88e-09 | 95 |
brain grey matter | 2.08e-09 | 29 |
regional part of telencephalon | 2.08e-09 | 29 |
telencephalon | 2.08e-09 | 29 |
organ system subdivision | 1.52e-08 | 194 |
regional part of cerebral cortex | 2.43e-07 | 17 |
occipital lobe | 3.95e-07 | 10 |
visual cortex | 3.95e-07 | 10 |
neocortex | 3.95e-07 | 10 |
cerebral cortex | 6.26e-07 | 21 |
cerebral hemisphere | 6.26e-07 | 21 |
pallium | 6.26e-07 | 21 |