FFCP PHASE1:Mm9::chrX:96331285..96331289,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=451|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:96331285..96331289,-|id=chrX:96331285..96331289,-|ontology_enrichment_celltype=CL:0002563!8.76e-09!9;CL:0002251!8.76e-09!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.86e-44,9;CL:0002251,1.86e-44,9;CL:0002076,1.89e-26,15;CL:0000239,2.82e-26,6;CL:0000677,2.82e-26,6;CL:0000584,2.82e-26,6;CL:0000223,4.67e-25,20;CL:0000075,1.55e-22,7;CL:0002250,4.63e-20,3;CL:0000066,7.03e-20,25;CL:0002321,6.06e-14,70;CL:0002609,8.35e-10,6;CL:0000213,4.65e-08,1;CL:0002078,4.65e-08,1;CL:0000115,4.65e-08,1;CL:0002262,4.65e-08,1;CL:1000398,4.65e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!8.76e-09!9;UBERON:0004808!8.76e-09!9;UBERON:0001277!8.76e-09!9;UBERON:0000485!8.08e-08!11;UBERON:0005157!3.23e-07!27;UBERON:0002048!3.65e-07!14;UBERON:0000117!3.65e-07!14;UBERON:0000171!3.65e-07!14;UBERON:0000170!3.65e-07!14;UBERON:0005597!3.65e-07!14;UBERON:0000118!3.65e-07!14;UBERON:0001242!6.25e-07!13;UBERON:0000060!6.25e-07!13;UBERON:0001262!6.25e-07!13;UBERON:0004786!6.25e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.86e-44,9;UBERON:0004808,1.86e-44,9;UBERON:0001277,1.86e-44,9;UBERON:0000485,2.80e-36,11;UBERON:0001242,1.30e-30,13;UBERON:0001262,1.30e-30,13;UBERON:0004786,1.30e-30,13;UBERON:0000344,1.89e-26,15;UBERON:0004923,2.77e-16,24;UBERON:0000160,9.81e-16,31;UBERON:0005409,4.67e-10,47;UBERON:0003929,1.61e-08,55;UBERON:0002394,4.65e-08,1;UBERON:0001281,4.65e-08,1;UBERON:0000353,4.65e-08,1;UBERON:0003497,4.65e-08,1;UBERON:0003909,4.65e-08,1;UBERON:0003928,4.65e-08,1;UBERON:0003835,4.65e-08,1;UBERON:0003513,4.65e-08,1;UBERON:0001280,4.65e-08,1;UBERON:0004647,4.65e-08,1;UBERON:0002294,4.65e-08,1;UBERON:0001173,4.65e-08,1;UBERON:0004912,4.65e-08,1;UBERON:0005171,4.65e-08,1;UBERON:0001153,1.33e-07,1;UBERON:0001045,1.33e-07,1;UBERON:0000490,6.31e-07,66|phase1_expression=0.320297694209588,2.44282785347553,0.454999239389536,2.72217790176147,4.50806156951712,1.17515490338323,1.40167584357315,0,0.563154888606667,0.70219357896598,0,0.159544317990673,0.171200729931206,0.34968160967599,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0.430761996159075,0.646413698057667,0,0.252030129759931,0.221730510655305,0,0,0,2.88851619751275,1.82858109894342,5.9209113316087,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0.336093799142464,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.933206510776299,1.08004750665353,1.05162480675691,0,0.220868540951614,0.367472397644862,0.479227355091182,2.75765635983006,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0.226714680320357,6.66688324013859,0,0,0,0,0,0,0.681721290312231,0.259786004602869,0.70667914902068,0,0,0,0,0,0.760079596425296,0,0.22836775943812,0.258937883647172,0,0.520455980298408,0.304465478312141,0,0.150722640552623,0.352766121407114,0.251333182659351,0.494389935468748,0,0,0,0,0.484875253135222,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0.260240885925407,0,0.360124259610698,0.60281927134286,0,0.12811372028485,0,0,0,0,0.527853372491847,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.380451252225118,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.280543279561274,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,0.81931657357869,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,0,0,0,0,1.26203287766503,0,0.430846795465598,0.238968797952552,0,0,0.809621403349789,0.584511715822624,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0.36012218806262,0.646793418913773,0.428674070063185,0.354680467284547,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.482503399425247,0.238744688006273,0.820704498725306,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0.655087691238533,0,0,0,0,0,0,0.747582730219894,0,0.194451188344048,0.516639293910924,0.675824501963113,0.234714477291508,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.830298780673413,0.399024873401031,0.341467211508268,0.729320151204882,0,0,0,0,0,0.505394423527595,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421|short_description=p@chrX:96331285..96331289,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=451 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:96331285..96331289,- | |||
|description=CAGE_peak_at_chrX:96331285..96331289,- | |||
|id=chrX:96331285..96331289,- | |||
|ontology_enrichment_celltype=CL:0002563!8.76e-09!9;CL:0002251!8.76e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.86e-44,9;CL:0002251,1.86e-44,9;CL:0002076,1.89e-26,15;CL:0000239,2.82e-26,6;CL:0000677,2.82e-26,6;CL:0000584,2.82e-26,6;CL:0000223,4.67e-25,20;CL:0000075,1.55e-22,7;CL:0002250,4.63e-20,3;CL:0000066,7.03e-20,25;CL:0002321,6.06e-14,70;CL:0002609,8.35e-10,6;CL:0000213,4.65e-08,1;CL:0002078,4.65e-08,1;CL:0000115,4.65e-08,1;CL:0002262,4.65e-08,1;CL:1000398,4.65e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!8.76e-09!9;UBERON:0004808!8.76e-09!9;UBERON:0001277!8.76e-09!9;UBERON:0000485!8.08e-08!11;UBERON:0005157!3.23e-07!27;UBERON:0002048!3.65e-07!14;UBERON:0000117!3.65e-07!14;UBERON:0000171!3.65e-07!14;UBERON:0000170!3.65e-07!14;UBERON:0005597!3.65e-07!14;UBERON:0000118!3.65e-07!14;UBERON:0001242!6.25e-07!13;UBERON:0000060!6.25e-07!13;UBERON:0001262!6.25e-07!13;UBERON:0004786!6.25e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.86e-44,9;UBERON:0004808,1.86e-44,9;UBERON:0001277,1.86e-44,9;UBERON:0000485,2.80e-36,11;UBERON:0001242,1.30e-30,13;UBERON:0001262,1.30e-30,13;UBERON:0004786,1.30e-30,13;UBERON:0000344,1.89e-26,15;UBERON:0004923,2.77e-16,24;UBERON:0000160,9.81e-16,31;UBERON:0005409,4.67e-10,47;UBERON:0003929,1.61e-08,55;UBERON:0002394,4.65e-08,1;UBERON:0001281,4.65e-08,1;UBERON:0000353,4.65e-08,1;UBERON:0003497,4.65e-08,1;UBERON:0003909,4.65e-08,1;UBERON:0003928,4.65e-08,1;UBERON:0003835,4.65e-08,1;UBERON:0003513,4.65e-08,1;UBERON:0001280,4.65e-08,1;UBERON:0004647,4.65e-08,1;UBERON:0002294,4.65e-08,1;UBERON:0001173,4.65e-08,1;UBERON:0004912,4.65e-08,1;UBERON:0005171,4.65e-08,1;UBERON:0001153,1.33e-07,1;UBERON:0001045,1.33e-07,1;UBERON:0000490,6.31e-07,66 | |||
|phase1_expression=0.320297694209588,2.44282785347553,0.454999239389536,2.72217790176147,4.50806156951712,1.17515490338323,1.40167584357315,0,0.563154888606667,0.70219357896598,0,0.159544317990673,0.171200729931206,0.34968160967599,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0.430761996159075,0.646413698057667,0,0.252030129759931,0.221730510655305,0,0,0,2.88851619751275,1.82858109894342,5.9209113316087,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,0,0,0.336093799142464,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.933206510776299,1.08004750665353,1.05162480675691,0,0.220868540951614,0.367472397644862,0.479227355091182,2.75765635983006,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0.226714680320357,6.66688324013859,0,0,0,0,0,0,0.681721290312231,0.259786004602869,0.70667914902068,0,0,0,0,0,0.760079596425296,0,0.22836775943812,0.258937883647172,0,0.520455980298408,0.304465478312141,0,0.150722640552623,0.352766121407114,0.251333182659351,0.494389935468748,0,0,0,0,0.484875253135222,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0.260240885925407,0,0.360124259610698,0.60281927134286,0,0.12811372028485,0,0,0,0,0.527853372491847,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.162137619091711,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0.380451252225118,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0.387904974335251,0.280543279561274,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.554259570499814,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,0.81931657357869,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,0,0,0,0,1.26203287766503,0,0.430846795465598,0.238968797952552,0,0,0.809621403349789,0.584511715822624,0,0.321321316421807,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0.36012218806262,0.646793418913773,0.428674070063185,0.354680467284547,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.482503399425247,0.238744688006273,0.820704498725306,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0.655087691238533,0,0,0,0,0,0,0.747582730219894,0,0.194451188344048,0.516639293910924,0.675824501963113,0.234714477291508,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.221985953374065,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.830298780673413,0.399024873401031,0.341467211508268,0.729320151204882,0,0,0,0,0,0.505394423527595,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chrX:96331285..96331289,- | |||
}} |
Latest revision as of 11:04, 6 August 2015
Short description: | p@chrX:96331285..96331289, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:96331285..96331289, - |
Coexpression cluster: | MCL_coexpression_mm9:451 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.86e-44 | 9 |
epithelial cell of alimentary canal | 1.86e-44 | 9 |
endo-epithelial cell | 1.89e-26 | 15 |
brush border epithelial cell | 2.82e-26 | 6 |
gut absorptive cell | 2.82e-26 | 6 |
enterocyte | 2.82e-26 | 6 |
endodermal cell | 4.67e-25 | 20 |
columnar/cuboidal epithelial cell | 1.55e-22 | 7 |
intestinal crypt stem cell | 4.63e-20 | 3 |
epithelial cell | 7.03e-20 | 25 |
embryonic cell | 6.06e-14 | 70 |
neuron of cerebral cortex | 8.35e-10 | 6 |
lining cell | 4.65e-08 | 1 |
meso-epithelial cell | 4.65e-08 | 1 |
endothelial cell | 4.65e-08 | 1 |
endothelial cell of sinusoid | 4.65e-08 | 1 |
endothelial cell of hepatic sinusoid | 4.65e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.86e-44 | 9 |
gastrointestinal system epithelium | 1.86e-44 | 9 |
intestinal epithelium | 1.86e-44 | 9 |
simple columnar epithelium | 2.80e-36 | 11 |
intestinal mucosa | 1.30e-30 | 13 |
wall of intestine | 1.30e-30 | 13 |
gastrointestinal system mucosa | 1.30e-30 | 13 |
mucosa | 1.89e-26 | 15 |
organ component layer | 2.77e-16 | 24 |
intestine | 9.81e-16 | 31 |
gastrointestinal system | 4.67e-10 | 47 |
gut epithelium | 1.61e-08 | 55 |
bile duct | 4.65e-08 | 1 |
hepatic sinusoid | 4.65e-08 | 1 |
parenchyma | 4.65e-08 | 1 |
abdomen blood vessel | 4.65e-08 | 1 |
sinusoid | 4.65e-08 | 1 |
digestive system duct | 4.65e-08 | 1 |
abdominal segment blood vessel | 4.65e-08 | 1 |
trunk blood vessel | 4.65e-08 | 1 |
liver parenchyma | 4.65e-08 | 1 |
liver lobule | 4.65e-08 | 1 |
biliary system | 4.65e-08 | 1 |
biliary tree | 4.65e-08 | 1 |
biliary bud | 4.65e-08 | 1 |
hepatic duct | 4.65e-08 | 1 |
caecum | 1.33e-07 | 1 |
midgut | 1.33e-07 | 1 |
unilaminar epithelium | 6.31e-07 | 66 |