FFCP PHASE2:Hg19::chr4:159443024..159443056,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:59350 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:19718 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=59350 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=19718 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DHD1 | ||
|association_with_transcript=0bp_to_ENST00000448688,uc003ipz.2,uc010iqj.1,uc010iqk.2,uc010iql.2,uc010iqm.2,uc010iqn.2,uc010iqo.2,uc011cja.1,uc011cjb.1,uc011cjc.1,uc011cjd.1,uc011cje.1,uc011cjf.1_5end | |association_with_transcript=0bp_to_ENST00000448688,uc003ipz.2,uc010iqj.1,uc010iqk.2,uc010iql.2,uc010iqm.2,uc010iqn.2,uc010iqo.2,uc011cja.1,uc011cjb.1,uc011cjc.1,uc011cjd.1,uc011cje.1,uc011cjf.1_5end | ||
|cluster_id=chr4:159443024..159443056,+ | |cluster_id=chr4:159443024..159443056,+ | ||
Latest revision as of 10:54, 16 September 2015
| Short description: | p1@RXFP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_RXFP1_5end |
| Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
| Association with transcript: | 0bp_to_ENST00000448688, uc003ipz.2, uc010iqj.1, uc010iqk.2, uc010iql.2, uc010iqm.2, uc010iqn.2, uc010iqo.2, uc011cja.1, uc011cjb.1, uc011cjc.1, uc011cjd.1, uc011cje.1, uc011cjf.1_5end |
| EntrezGene: | RXFP1 |
| HGNC: | 19718 |
| UniProt: | B4DHD1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@RXFP1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cerebral hemisphere | 3.80e-40 | 32 |
| telencephalon | 2.52e-37 | 34 |
| regional part of cerebral cortex | 3.01e-37 | 22 |
| regional part of telencephalon | 6.92e-37 | 32 |
| regional part of forebrain | 2.75e-34 | 41 |
| forebrain | 2.75e-34 | 41 |
| anterior neural tube | 2.75e-34 | 41 |
| future forebrain | 2.75e-34 | 41 |
| brain grey matter | 2.84e-34 | 34 |
| gray matter | 2.84e-34 | 34 |
Showing 1 to 10 of 59 entries
| Ontology term | p-value | n |
|---|---|---|
| ovarian cancer | 1.27e-13 | 14 |
| female reproductive organ cancer | 8.85e-09 | 27 |
| reproductive organ cancer | 5.83e-08 | 29 |
Showing 1 to 3 of 3 entries
