FFCP PHASE1:Hg19::chr6:159420667..159420681,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=83861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=21054 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 13:16, 16 September 2015
| Short description: | p5@RSPH3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_RSPH3_5end |
| Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
| Association with transcript: | 131bp_to_ENST00000449822_5end |
| EntrezGene: | RSPH3 |
| HGNC: | 21054 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@RSPH3 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatopancreatic ampulla | 1.41e-14 | 1 |
| extrahepatic bile duct | 1.41e-14 | 1 |
| common bile duct | 1.41e-14 | 1 |
| duodenal papilla | 1.41e-14 | 1 |
| heart left ventricle | 2.11e-14 | 1 |
| cardiac ventricle | 2.11e-14 | 1 |
| future cardiac ventricle | 2.11e-14 | 1 |
| dorsal plus ventral thalamus | 4.38e-08 | 2 |
| thalamic complex | 4.38e-08 | 2 |
| amygdala | 5.02e-08 | 2 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| non-Hodgkin lymphoma | 5.42e-15 | 1 |
| cutaneous T cell lymphoma | 5.42e-15 | 1 |
| mycosis fungoides | 5.42e-15 | 1 |
| chondrosarcoma | 6.22e-15 | 1 |
| extraosseous chondrosarcoma | 6.22e-15 | 1 |
| myxoid chondrosarcoma | 6.22e-15 | 1 |
| extraskeletal myxoid chondrosarcoma | 6.22e-15 | 1 |
| tubular adenocarcinoma | 6.15e-08 | 2 |
| pancreas adenocarcinoma | 6.58e-08 | 2 |
| pancreatic carcinoma | 6.58e-08 | 2 |
Showing 1 to 10 of 12 entries
