FFCP PHASE2:Hg19::chr9:20622478..20622525,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4300 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7136 |TSSclass...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4300 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7136 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B1APT6,P42568,Q6MZE2,Q8IVB0,Q6LEQ8 | ||
|association_with_transcript=0bp_to_ENST00000355930,NM_004529,uc003zoe.2,uc003zof.2_5end | |association_with_transcript=0bp_to_ENST00000355930,NM_004529,uc003zoe.2,uc003zof.2_5end | ||
|cluster_id=chr9:20622478..20622525,- | |cluster_id=chr9:20622478..20622525,- | ||
Latest revision as of 22:04, 16 September 2015
| Short description: | p1@MLLT3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_MLLT3_5end |
| Coexpression cluster: | C4812_occipital_parietal_rectal_duodenum_temporal_neuroectodermal_CD4 |
| Association with transcript: | 0bp_to_ENST00000355930, NM_004529, uc003zoe.2, uc003zof.2_5end |
| EntrezGene: | MLLT3 |
| HGNC: | 7136 |
| UniProt: | B1APT6P42568Q6MZE2Q8IVB0Q6LEQ8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@MLLT3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mature alpha-beta T cell | 6.74e-09 | 18 |
| alpha-beta T cell | 6.74e-09 | 18 |
| immature T cell | 6.74e-09 | 18 |
| mature T cell | 6.74e-09 | 18 |
| immature alpha-beta T cell | 6.74e-09 | 18 |
| T cell | 2.03e-08 | 25 |
| pro-T cell | 2.03e-08 | 25 |
| lymphoid lineage restricted progenitor cell | 8.00e-08 | 52 |
| lymphocyte | 3.28e-07 | 53 |
| common lymphoid progenitor | 3.28e-07 | 53 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 7.50e-22 | 56 |
| neural rod | 7.50e-22 | 56 |
| future spinal cord | 7.50e-22 | 56 |
| neural keel | 7.50e-22 | 56 |
| adult organism | 7.70e-21 | 114 |
| regional part of nervous system | 8.91e-21 | 53 |
| regional part of brain | 8.91e-21 | 53 |
| regional part of forebrain | 7.06e-19 | 41 |
| forebrain | 7.06e-19 | 41 |
| anterior neural tube | 7.06e-19 | 41 |
Showing 1 to 10 of 34 entries
