FFCP PHASE2:Hg19::chr6:17706978..17707056,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9972 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:8062 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8062 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P49790,Q4LE47 | ||
|association_with_transcript=-160bp_to_ENST00000430136,NM_005124,uc003ncd.1,uc010jpl.1,uc011dje.1_5end | |association_with_transcript=-160bp_to_ENST00000430136,NM_005124,uc003ncd.1,uc010jpl.1,uc011dje.1_5end | ||
|cluster_id=chr6:17706978..17707056,- | |cluster_id=chr6:17706978..17707056,- | ||
Latest revision as of 00:59, 17 September 2015
| Short description: | p2@NUP153 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_NUP153_5end |
| Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
| Association with transcript: | -160bp_to_ENST00000430136, NM_005124, uc003ncd.1, uc010jpl.1, uc011dje.1_5end |
| EntrezGene: | NUP153 |
| HGNC: | 8062 |
| UniProt: | P49790Q4LE47 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@NUP153 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 2.26e-45 | 168 |
| hematopoietic cell | 4.39e-42 | 177 |
| hematopoietic oligopotent progenitor cell | 2.10e-41 | 161 |
| hematopoietic multipotent progenitor cell | 2.10e-41 | 161 |
| leukocyte | 5.99e-37 | 136 |
| hematopoietic lineage restricted progenitor cell | 7.87e-29 | 120 |
| nongranular leukocyte | 1.14e-28 | 115 |
| myeloid cell | 3.98e-23 | 108 |
| common myeloid progenitor | 3.98e-23 | 108 |
| lymphocyte | 6.86e-17 | 53 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 5.77e-15 | 98 |
| blood island | 5.77e-15 | 98 |
| hemolymphoid system | 9.53e-12 | 108 |
| bone marrow | 1.13e-08 | 76 |
| bone element | 2.49e-08 | 82 |
| immune system | 1.74e-07 | 93 |
| blood | 4.15e-07 | 15 |
| haemolymphatic fluid | 4.15e-07 | 15 |
| organism substance | 4.15e-07 | 15 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 6.47e-09 | 51 |
| immune system cancer | 6.47e-09 | 51 |
| leukemia | 3.14e-07 | 39 |
Showing 1 to 3 of 3 entries
