FFCP PHASE1:Hg19::chr17:579589..579596,-
From FANTOM5_SSTAR
| Short description: | p9@VPS53 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_9_at_VPS53_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | 50bp_to_uc002frk.2_5end |
| EntrezGene: | VPS53 |
| HGNC: | 25608 |
| UniProt: | B1AA16 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@VPS53 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cerebellum | 4.27e-34 | 6 |
| rhombic lip | 4.27e-34 | 6 |
| regional part of metencephalon | 2.62e-23 | 9 |
| metencephalon | 2.62e-23 | 9 |
| future metencephalon | 2.62e-23 | 9 |
| segmental subdivision of hindbrain | 6.76e-18 | 12 |
| hindbrain | 6.76e-18 | 12 |
| presumptive hindbrain | 6.76e-18 | 12 |
| segmental subdivision of nervous system | 1.21e-16 | 13 |
| posterior neural tube | 1.22e-14 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
