FFCP PHASE2:Hg19::chr21:47518016..47518071,+
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Short description: | p1@COL6A2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | 0bp_to_ENST00000310645, ENST00000357838, NM_001849, NM_058174, NM_058175, uc002zhy.1, uc002zhz.1, uc002zia.1, uc002zib.1_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | P12110Q9BUM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@COL6A2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 4.17e-26 | 76 |
muscle precursor cell | 2.78e-19 | 58 |
myoblast | 2.78e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.78e-19 | 58 |
muscle cell | 6.31e-19 | 55 |
electrically responsive cell | 6.24e-18 | 61 |
electrically active cell | 6.24e-18 | 61 |
smooth muscle cell | 5.68e-14 | 43 |
smooth muscle myoblast | 5.68e-14 | 43 |
skin fibroblast | 4.69e-11 | 23 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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dense mesenchyme tissue | 1.99e-24 | 73 |
somite | 2.09e-24 | 71 |
presomitic mesoderm | 2.09e-24 | 71 |
presumptive segmental plate | 2.09e-24 | 71 |
dermomyotome | 2.09e-24 | 71 |
trunk paraxial mesoderm | 2.09e-24 | 71 |
paraxial mesoderm | 6.13e-24 | 72 |
presumptive paraxial mesoderm | 6.13e-24 | 72 |
epithelial vesicle | 5.49e-23 | 78 |
mesenchyme | 1.66e-21 | 160 |
Showing 1 to 10 of 31 entries