FFCP PHASE1:Hg19::chr12:7848364..7848378,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@GDF3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_GDF3_5end |
| Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
| Association with transcript: | 0bp_to_ENST00000329913_5end |
| EntrezGene: | GDF3 |
| HGNC: | 4218 |
| UniProt: | Q9NR23 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@GDF3 |
|---|
0
250
500
750
1000
1250
1500
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic stem cell | 2.80e-29 | 5 |
| vein endothelial cell | 5.24e-23 | 6 |
| endothelial cell | 1.02e-19 | 36 |
| endothelial cell of umbilical vein | 1.91e-17 | 3 |
| meso-epithelial cell | 2.63e-15 | 45 |
| blood vessel endothelial cell | 3.29e-14 | 18 |
| embryonic blood vessel endothelial progenitor cell | 3.29e-14 | 18 |
| germ line cell | 5.90e-14 | 7 |
| germ cell | 5.90e-14 | 7 |
| endothelial cell of sinusoid | 3.70e-12 | 2 |
Showing 1 to 10 of 21 entries
| Ontology term | p-value | n |
|---|---|---|
| vein | 2.75e-15 | 9 |
| venous blood vessel | 2.75e-15 | 9 |
| venous system | 2.75e-15 | 9 |
| blood vessel endothelium | 3.29e-14 | 18 |
| endothelium | 3.29e-14 | 18 |
| cardiovascular system endothelium | 3.29e-14 | 18 |
| testis | 3.19e-12 | 8 |
| hepatic sinusoid | 3.70e-12 | 2 |
| abdomen blood vessel | 3.70e-12 | 2 |
| sinusoid | 3.70e-12 | 2 |
Showing 1 to 10 of 53 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 5.76e-12 | 22 |
| germ cell cancer | 5.76e-12 | 22 |
| acute myeloid leukemia | 5.37e-07 | 1 |
Showing 1 to 3 of 3 entries
