FFCP PHASE1:Mm9::chr5:24104722..24104736,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p9@Smarcd3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_9_at_Smarcd3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:100 |
| Association with transcript: | 19bp_to_ENSMUST00000145565_5end |
| EntrezGene: | Smarcd3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@Smarcd3 |
|---|
0
1
2
3
4
5
6
7
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 8.09e-49 | 23 |
| neuroblast (sensu Vertebrata) | 8.09e-49 | 23 |
| neuron | 1.29e-33 | 33 |
| neuronal stem cell | 1.29e-33 | 33 |
| neuroblast | 1.29e-33 | 33 |
| electrically signaling cell | 1.29e-33 | 33 |
| electrically responsive cell | 3.15e-28 | 39 |
| electrically active cell | 3.15e-28 | 39 |
| neural cell | 1.81e-25 | 43 |
| ectodermal cell | 7.42e-25 | 44 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| gray matter | 7.63e-28 | 34 |
| corpus striatum | 1.94e-19 | 5 |
| striatum | 1.94e-19 | 5 |
| ventral part of telencephalon | 1.94e-19 | 5 |
| future corpus striatum | 1.94e-19 | 5 |
| regional part of spinal cord | 1.08e-18 | 5 |
| gray matter of spinal cord | 1.08e-18 | 5 |
| ventral horn of spinal cord | 6.86e-18 | 3 |
| neural tube | 1.04e-17 | 52 |
| neural rod | 1.04e-17 | 52 |
Showing 1 to 10 of 48 entries
