FFCP PHASE2:Hg19::chr10:52385140..52385179,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p12@SGMS1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_12_at_SGMS1_5end |
| Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
| Association with transcript: | -217bp_to_uc010qhk.1_5end |
| EntrezGene: | SGMS1 |
| HGNC: | 29799 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p12@SGMS1 |
|---|
0
1
2
3
4
5
6
7
8
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphoid lineage restricted progenitor cell | 1.11e-34 | 52 |
| lymphocyte | 6.24e-34 | 53 |
| common lymphoid progenitor | 6.24e-34 | 53 |
| mature alpha-beta T cell | 2.81e-29 | 18 |
| alpha-beta T cell | 2.81e-29 | 18 |
| immature T cell | 2.81e-29 | 18 |
| mature T cell | 2.81e-29 | 18 |
| immature alpha-beta T cell | 2.81e-29 | 18 |
| leukocyte | 2.07e-27 | 136 |
| nongranular leukocyte | 9.16e-25 | 115 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 5.31e-07 | 371 |
Showing 1 to 1 of 1 entries
