FFCP PHASE2:Hg19::chr17:2207062..2207116,-
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| Short description: | p1@SMG6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SMG6_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000263073, NM_017575, uc002fub.1_5end |
| EntrezGene: | SMG6 |
| HGNC: | 17809 |
| UniProt: | Q86US8 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p1@SMG6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mature alpha-beta T cell | 1.17e-08 | 18 |
| alpha-beta T cell | 1.17e-08 | 18 |
| immature T cell | 1.17e-08 | 18 |
| mature T cell | 1.17e-08 | 18 |
| immature alpha-beta T cell | 1.17e-08 | 18 |
| lymphoid lineage restricted progenitor cell | 1.88e-08 | 52 |
| lymphocyte | 4.66e-08 | 53 |
| common lymphoid progenitor | 4.66e-08 | 53 |
| T cell | 2.73e-07 | 25 |
| pro-T cell | 2.73e-07 | 25 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 7.96e-28 | 114 |
| neural tube | 6.11e-24 | 56 |
| neural rod | 6.11e-24 | 56 |
| future spinal cord | 6.11e-24 | 56 |
| neural keel | 6.11e-24 | 56 |
| regional part of nervous system | 9.24e-23 | 53 |
| regional part of brain | 9.24e-23 | 53 |
| neural plate | 2.11e-21 | 82 |
| presumptive neural plate | 2.11e-21 | 82 |
| neurectoderm | 2.17e-21 | 86 |
Showing 1 to 10 of 35 entries
