FFCP PHASE2:Hg19::chr19:19030157..19030210,-
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Short description: | p1@COPE |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COPE_5end |
Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
Association with transcript: | 0bp_to_ENST00000262812, ENST00000349893, ENST00000351079, ENST00000538245, NM_007263, NM_199442, NM_199444, uc002nkk.2, uc002nkl.2, uc002nkm.2, uc002nkn.2_5end |
EntrezGene: | COPE |
HGNC: | 2234 |
UniProt: | O14579A6NE29A6NKA3F5H1E1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@COPE |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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somatic stem cell | 7.41e-26 | 433 |
multi fate stem cell | 2.01e-25 | 427 |
stem cell | 3.06e-25 | 441 |
smooth muscle cell | 2.55e-15 | 43 |
smooth muscle myoblast | 2.55e-15 | 43 |
mesodermal cell | 3.70e-15 | 121 |
connective tissue cell | 3.01e-13 | 361 |
vascular associated smooth muscle cell | 8.21e-13 | 32 |
mesenchymal cell | 1.37e-12 | 354 |
muscle precursor cell | 2.53e-12 | 58 |
Showing 1 to 10 of 28 entries
Ontology term | p-value | n |
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lateral plate mesoderm | 5.63e-14 | 203 |
musculoskeletal system | 3.98e-13 | 167 |
vasculature | 1.84e-12 | 78 |
vascular system | 1.84e-12 | 78 |
epithelial vesicle | 8.64e-12 | 78 |
connective tissue | 1.29e-11 | 371 |
mesoderm | 1.87e-11 | 315 |
mesoderm-derived structure | 1.87e-11 | 315 |
presumptive mesoderm | 1.87e-11 | 315 |
artery | 3.77e-11 | 42 |
Showing 1 to 10 of 44 entries