FFCP PHASE1:Mm9::chr18:61008516..61008554,-: Difference between revisions
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|id=chr18:61008516..61008554,- | |id=chr18:61008516..61008554,- | ||
|ontology_enrichment_celltype=CL:0000988!1.92e-11!32;CL:0002032!1.92e-11!32;CL:0000037!1.92e-11!32;CL:0000566!1.92e-11!32;CL:0000837!1.92e-11!32;CL:0002031!8.01e-09!25;CL:0002320!8.83e-08!46;CL:0000134!8.83e-08!46;CL:0000738!1.09e-07!17;CL:0002087!1.09e-07!17;CL:0000542!3.07e-07!13;CL:0000051!3.07e-07!13;CL:0000838!6.34e-07!12 | |ontology_enrichment_celltype=CL:0000988!1.92e-11!32;CL:0002032!1.92e-11!32;CL:0000037!1.92e-11!32;CL:0000566!1.92e-11!32;CL:0000837!1.92e-11!32;CL:0002031!8.01e-09!25;CL:0002320!8.83e-08!46;CL:0000134!8.83e-08!46;CL:0000738!1.09e-07!17;CL:0002087!1.09e-07!17;CL:0000542!3.07e-07!13;CL:0000051!3.07e-07!13;CL:0000838!6.34e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.27e-11,32;CL:0002032,1.27e-11,32;CL:0000037,1.27e-11,32;CL:0000837,1.27e-11,32;CL:0002031,5.55e-09,25;CL:0002320,4.46e-08,46;CL:0000134,4.46e-08,46;CL:0000738,1.01e-07,17;CL:0002087,1.01e-07,17;CL:0000542,2.84e-07,13;CL:0000051,2.84e-07,13;CL:0000838,5.90e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.84e-13!45;UBERON:0003061!6.84e-13!45;UBERON:0002193!6.87e-12!48;UBERON:0004177!1.37e-09!29;UBERON:0002370!1.23e-08!23;UBERON:0000974!1.23e-08!23;UBERON:0004807!1.23e-08!23;UBERON:0005058!1.23e-08!23;UBERON:0003351!1.23e-08!23;UBERON:0009113!1.23e-08!23;UBERON:0003295!1.23e-08!23;UBERON:0009722!1.23e-08!23;UBERON:0005562!1.23e-08!23;UBERON:0007690!1.23e-08!23;UBERON:0003408!1.74e-08!24;UBERON:0002384!8.83e-08!46;UBERON:0006562!1.19e-07!24;UBERON:0001557!1.19e-07!24;UBERON:0001042!1.19e-07!24;UBERON:0008814!1.19e-07!24;UBERON:0009145!1.19e-07!24;UBERON:0003081!2.82e-07!88 | |ontology_enrichment_uberon=UBERON:0002390!6.84e-13!45;UBERON:0003061!6.84e-13!45;UBERON:0002193!6.87e-12!48;UBERON:0004177!1.37e-09!29;UBERON:0002370!1.23e-08!23;UBERON:0000974!1.23e-08!23;UBERON:0004807!1.23e-08!23;UBERON:0005058!1.23e-08!23;UBERON:0003351!1.23e-08!23;UBERON:0009113!1.23e-08!23;UBERON:0003295!1.23e-08!23;UBERON:0009722!1.23e-08!23;UBERON:0005562!1.23e-08!23;UBERON:0007690!1.23e-08!23;UBERON:0003408!1.74e-08!24;UBERON:0002384!8.83e-08!46;UBERON:0006562!1.19e-07!24;UBERON:0001557!1.19e-07!24;UBERON:0001042!1.19e-07!24;UBERON:0008814!1.19e-07!24;UBERON:0009145!1.19e-07!24;UBERON:0003081!2.82e-07!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.51e-13,45;UBERON:0003061,3.51e-13,45;UBERON:0002193,4.40e-12,48;UBERON:0002405,4.40e-12,48;UBERON:0004177,7.23e-10,29;UBERON:0005057,7.23e-10,29;UBERON:0002370,6.40e-09,23;UBERON:0000974,6.40e-09,23;UBERON:0004807,6.40e-09,23;UBERON:0005058,6.40e-09,23;UBERON:0003351,6.40e-09,23;UBERON:0009113,6.40e-09,23;UBERON:0003295,6.40e-09,23;UBERON:0009722,6.40e-09,23;UBERON:0005562,6.40e-09,23;UBERON:0007690,6.40e-09,23;UBERON:0003408,9.25e-09,24;UBERON:0002384,4.46e-08,46;UBERON:0006562,6.54e-08,24;UBERON:0001557,6.54e-08,24;UBERON:0001042,6.54e-08,24;UBERON:0008814,6.54e-08,24;UBERON:0009145,6.54e-08,24;UBERON:0000926,1.51e-07,120;UBERON:0004120,1.51e-07,120;UBERON:0006603,1.51e-07,120;UBERON:0000153,3.25e-07,43;UBERON:0003081,5.74e-07,87 | |||
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| ||
|short_description=p2@Tcof1 | |short_description=p2@Tcof1 | ||
}} | }} |
Revision as of 11:52, 13 November 2012
Short description: | p2@Tcof1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tcof1_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 7bp_to_ENSMUST00000057579_5end |
EntrezGene: | Tcof1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.27e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.27e-11 | 32 |
hematopoietic stem cell | 1.27e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.27e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 5.55e-09 | 25 |
connective tissue cell | 4.46e-08 | 46 |
mesenchymal cell | 4.46e-08 | 46 |
leukocyte | 1.01e-07 | 17 |
nongranular leukocyte | 1.01e-07 | 17 |
lymphocyte | 2.84e-07 | 13 |
common lymphoid progenitor | 2.84e-07 | 13 |
lymphoid lineage restricted progenitor cell | 5.90e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.51e-13 | 45 |
blood island | 3.51e-13 | 45 |
hemolymphoid system | 4.40e-12 | 48 |
immune system | 4.40e-12 | 48 |
hemopoietic organ | 7.23e-10 | 29 |
immune organ | 7.23e-10 | 29 |
thymus | 6.40e-09 | 23 |
neck | 6.40e-09 | 23 |
respiratory system epithelium | 6.40e-09 | 23 |
hemolymphoid system gland | 6.40e-09 | 23 |
pharyngeal epithelium | 6.40e-09 | 23 |
thymic region | 6.40e-09 | 23 |
pharyngeal gland | 6.40e-09 | 23 |
entire pharyngeal arch endoderm | 6.40e-09 | 23 |
thymus primordium | 6.40e-09 | 23 |
early pharyngeal endoderm | 6.40e-09 | 23 |
gland of gut | 9.25e-09 | 24 |
connective tissue | 4.46e-08 | 46 |
pharynx | 6.54e-08 | 24 |
upper respiratory tract | 6.54e-08 | 24 |
chordate pharynx | 6.54e-08 | 24 |
pharyngeal arch system | 6.54e-08 | 24 |
pharyngeal region of foregut | 6.54e-08 | 24 |
mesoderm | 1.51e-07 | 120 |
mesoderm-derived structure | 1.51e-07 | 120 |
presumptive mesoderm | 1.51e-07 | 120 |
anterior region of body | 3.25e-07 | 43 |
lateral plate mesoderm | 5.74e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.