FFCP PHASE1:Mm9::chr7:31179449..31179460,-: Difference between revisions
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|id=chr7:31179449..31179460,- | |id=chr7:31179449..31179460,- | ||
|ontology_enrichment_celltype=CL:0000838!1.52e-27!12;CL:0000084!3.15e-25!11;CL:0000827!3.15e-25!11;CL:0000542!3.23e-25!13;CL:0000051!3.23e-25!13;CL:0000738!3.60e-22!17;CL:0002087!3.60e-22!17;CL:0000791!4.70e-21!9;CL:0000789!4.70e-21!9;CL:0002420!4.70e-21!9;CL:0002419!4.70e-21!9;CL:0000790!4.70e-21!9;CL:0000624!1.08e-18!8;CL:0002031!1.51e-16!25;CL:0000988!5.41e-16!32;CL:0002032!5.41e-16!32;CL:0000037!5.41e-16!32;CL:0000566!5.41e-16!32;CL:0000837!5.41e-16!32;CL:0000893!1.60e-14!6;CL:0002489!1.60e-14!6;CL:0000898!1.60e-14!6;CL:0000809!1.60e-14!6;CL:0000810!1.60e-14!6;CL:0000895!1.60e-14!6;CL:0000808!1.60e-14!6;CL:0000894!1.60e-14!6;CL:0000806!1.60e-14!6;CL:0000807!1.60e-14!6;CL:0000805!1.60e-14!6;CL:0002425!1.60e-14!6;CL:0002436!1.60e-14!6;CL:0002427!1.60e-14!6;CL:0002428!1.60e-14!6;CL:0002429!1.60e-14!6;CL:0002433!1.60e-14!6;CL:0002431!1.60e-14!6;CL:0002432!1.60e-14!6;CL:0002320!5.28e-10!46;CL:0000134!5.28e-10!46;CL:0000219!5.40e-08!54 | |ontology_enrichment_celltype=CL:0000838!1.52e-27!12;CL:0000084!3.15e-25!11;CL:0000827!3.15e-25!11;CL:0000542!3.23e-25!13;CL:0000051!3.23e-25!13;CL:0000738!3.60e-22!17;CL:0002087!3.60e-22!17;CL:0000791!4.70e-21!9;CL:0000789!4.70e-21!9;CL:0002420!4.70e-21!9;CL:0002419!4.70e-21!9;CL:0000790!4.70e-21!9;CL:0000624!1.08e-18!8;CL:0002031!1.51e-16!25;CL:0000988!5.41e-16!32;CL:0002032!5.41e-16!32;CL:0000037!5.41e-16!32;CL:0000566!5.41e-16!32;CL:0000837!5.41e-16!32;CL:0000893!1.60e-14!6;CL:0002489!1.60e-14!6;CL:0000898!1.60e-14!6;CL:0000809!1.60e-14!6;CL:0000810!1.60e-14!6;CL:0000895!1.60e-14!6;CL:0000808!1.60e-14!6;CL:0000894!1.60e-14!6;CL:0000806!1.60e-14!6;CL:0000807!1.60e-14!6;CL:0000805!1.60e-14!6;CL:0002425!1.60e-14!6;CL:0002436!1.60e-14!6;CL:0002427!1.60e-14!6;CL:0002428!1.60e-14!6;CL:0002429!1.60e-14!6;CL:0002433!1.60e-14!6;CL:0002431!1.60e-14!6;CL:0002432!1.60e-14!6;CL:0002320!5.28e-10!46;CL:0000134!5.28e-10!46;CL:0000219!5.40e-08!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,8.42e-10,1;CL:0000355,1.67e-09,9;CL:0000791,3.23e-09,9;CL:0000789,3.23e-09,9;CL:0002420,3.23e-09,9;CL:0002419,3.23e-09,9;CL:0000790,3.23e-09,9;CL:0000738,2.18e-08,17;CL:0002087,2.18e-08,17;CL:0000084,1.20e-07,11;CL:0000827,1.20e-07,11;CL:0000838,4.70e-07,12 | |||
|ontology_enrichment_disease=DOID:0060100!5.69e-09!3;DOID:4045!5.69e-09!3 | |ontology_enrichment_disease=DOID:0060100!5.69e-09!3;DOID:4045!5.69e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.80e-27,3;DOID:4045,3.80e-27,3;DOID:0050686,6.10e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.03e-14!23;UBERON:0000974!1.03e-14!23;UBERON:0004807!1.03e-14!23;UBERON:0005058!1.03e-14!23;UBERON:0003351!1.03e-14!23;UBERON:0009113!1.03e-14!23;UBERON:0003295!1.03e-14!23;UBERON:0009722!1.03e-14!23;UBERON:0005562!1.03e-14!23;UBERON:0007690!1.03e-14!23;UBERON:0006562!5.54e-14!24;UBERON:0003408!5.54e-14!24;UBERON:0001557!5.54e-14!24;UBERON:0001042!5.54e-14!24;UBERON:0008814!5.54e-14!24;UBERON:0009145!5.54e-14!24;UBERON:0004177!5.52e-13!29;UBERON:0000072!4.09e-12!27;UBERON:0000065!3.30e-11!41;UBERON:0001004!7.42e-11!42;UBERON:0000063!3.86e-10!35;UBERON:0002390!4.98e-10!45;UBERON:0003061!4.98e-10!45;UBERON:0002384!5.28e-10!46;UBERON:0002193!3.51e-09!48 | |ontology_enrichment_uberon=UBERON:0002370!1.03e-14!23;UBERON:0000974!1.03e-14!23;UBERON:0004807!1.03e-14!23;UBERON:0005058!1.03e-14!23;UBERON:0003351!1.03e-14!23;UBERON:0009113!1.03e-14!23;UBERON:0003295!1.03e-14!23;UBERON:0009722!1.03e-14!23;UBERON:0005562!1.03e-14!23;UBERON:0007690!1.03e-14!23;UBERON:0006562!5.54e-14!24;UBERON:0003408!5.54e-14!24;UBERON:0001557!5.54e-14!24;UBERON:0001042!5.54e-14!24;UBERON:0008814!5.54e-14!24;UBERON:0009145!5.54e-14!24;UBERON:0004177!5.52e-13!29;UBERON:0000072!4.09e-12!27;UBERON:0000065!3.30e-11!41;UBERON:0001004!7.42e-11!42;UBERON:0000063!3.86e-10!35;UBERON:0002390!4.98e-10!45;UBERON:0003061!4.98e-10!45;UBERON:0002384!5.28e-10!46;UBERON:0002193!3.51e-09!48 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.67e-09,9;UBERON:0002036,1.67e-09,9;UBERON:0002385,1.67e-09,9;UBERON:0000486,1.67e-09,9;UBERON:0007503,1.67e-09,9;UBERON:0001015,1.67e-09,9;UBERON:0002329,1.67e-09,9;UBERON:0003082,1.67e-09,9;UBERON:0003059,1.67e-09,9;UBERON:0007282,1.67e-09,9;UBERON:0004290,1.67e-09,9;UBERON:0009618,1.67e-09,9;UBERON:0000383,1.31e-08,10;UBERON:0007524,7.05e-08,11;UBERON:0003077,7.05e-08,11;UBERON:0007285,7.05e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.985521055061667,0.234064526321993,0.171217968225505,0.239316476986009,1.71200729931206,0.524522414513984,0,0,0,0,0.274228867211478,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85944283031671,3.1253413780952,5.23523743973798,23.5292595212406,10.2456822743767,5.82612423637384,0,0,0,0,0,0,0,0,0,0.838913030288682,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,1.08781136763742,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0.481059208201647,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.985521055061667,0.234064526321993,0.171217968225505,0.239316476986009,1.71200729931206,0.524522414513984,0,0,0,0,0.274228867211478,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85944283031671,3.1253413780952,5.23523743973798,23.5292595212406,10.2456822743767,5.82612423637384,0,0,0,0,0,0,0,0,0,0.838913030288682,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,1.08781136763742,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0.481059208201647,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:31179449..31179460,- | |short_description=p@chr7:31179449..31179460,- | ||
}} | }} |
Revision as of 12:22, 13 November 2012
Short description: | p@chr7:31179449..31179460, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:31179449..31179460, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 8.42e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.67e-09 | 9 |
mature alpha-beta T cell | 3.23e-09 | 9 |
alpha-beta T cell | 3.23e-09 | 9 |
immature T cell | 3.23e-09 | 9 |
mature T cell | 3.23e-09 | 9 |
immature alpha-beta T cell | 3.23e-09 | 9 |
leukocyte | 2.18e-08 | 17 |
nongranular leukocyte | 2.18e-08 | 17 |
T cell | 1.20e-07 | 11 |
pro-T cell | 1.20e-07 | 11 |
lymphoid lineage restricted progenitor cell | 4.70e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.67e-09 | 9 |
striated muscle tissue | 1.67e-09 | 9 |
muscle tissue | 1.67e-09 | 9 |
multilaminar epithelium | 1.67e-09 | 9 |
epithelial vesicle | 1.67e-09 | 9 |
musculature | 1.67e-09 | 9 |
somite | 1.67e-09 | 9 |
myotome | 1.67e-09 | 9 |
presomitic mesoderm | 1.67e-09 | 9 |
presumptive segmental plate | 1.67e-09 | 9 |
dermomyotome | 1.67e-09 | 9 |
trunk paraxial mesoderm | 1.67e-09 | 9 |
musculature of body | 1.31e-08 | 10 |
dense mesenchyme tissue | 7.05e-08 | 11 |
paraxial mesoderm | 7.05e-08 | 11 |
presumptive paraxial mesoderm | 7.05e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.80e-27 | 3 |
muscle cancer | 3.80e-27 | 3 |
organ system cancer | 6.10e-14 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.