FFCP PHASE1:Mm9::chr11:115229001..115229048,-: Difference between revisions
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|id=chr11:115229001..115229048,- | |id=chr11:115229001..115229048,- | ||
|ontology_enrichment_celltype=CL:0000221!4.20e-09!44;CL:0000133!4.20e-09!44;CL:0002319!8.43e-09!43;CL:0000117!1.96e-08!23;CL:0000337!1.96e-08!23;CL:0000540!1.86e-07!33;CL:0000047!1.86e-07!33;CL:0000031!1.86e-07!33;CL:0000404!1.86e-07!33 | |ontology_enrichment_celltype=CL:0000221!4.20e-09!44;CL:0000133!4.20e-09!44;CL:0002319!8.43e-09!43;CL:0000117!1.96e-08!23;CL:0000337!1.96e-08!23;CL:0000540!1.86e-07!33;CL:0000047!1.86e-07!33;CL:0000031!1.86e-07!33;CL:0000404!1.86e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.14e-09,44;CL:0000133,4.14e-09,44;CL:0002319,8.31e-09,43;CL:0000117,1.93e-08,23;CL:0000337,1.93e-08,23;CL:0000540,1.84e-07,33;CL:0000047,1.84e-07,33;CL:0000031,1.84e-07,33;CL:0000404,1.84e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.84e-23!75;UBERON:0001016!3.84e-23!75;UBERON:0001017!5.38e-23!73;UBERON:0005743!5.38e-23!73;UBERON:0004121!2.58e-21!102;UBERON:0000924!2.58e-21!102;UBERON:0006601!2.58e-21!102;UBERON:0001049!1.01e-19!52;UBERON:0005068!1.01e-19!52;UBERON:0006241!1.01e-19!52;UBERON:0007135!1.01e-19!52;UBERON:0000955!4.45e-19!50;UBERON:0006238!4.45e-19!50;UBERON:0002616!1.38e-18!49;UBERON:0000033!6.23e-18!63;UBERON:0002346!1.40e-17!71;UBERON:0003075!1.40e-17!71;UBERON:0007284!1.40e-17!71;UBERON:0003080!9.80e-15!40;UBERON:0002780!3.55e-14!39;UBERON:0001890!3.55e-14!39;UBERON:0006240!3.55e-14!39;UBERON:0002020!1.83e-13!34;UBERON:0007811!1.86e-13!86;UBERON:0003056!1.32e-12!49;UBERON:0002791!1.44e-11!29;UBERON:0003528!1.44e-11!29;UBERON:0001893!1.44e-11!29;UBERON:0000153!2.74e-10!94;UBERON:0000956!1.58e-08!21;UBERON:0001869!1.58e-08!21;UBERON:0000203!1.58e-08!21;UBERON:0001045!1.73e-08!13;UBERON:0001264!3.96e-08!12;UBERON:0003922!3.96e-08!12;UBERON:0002114!3.96e-08!12;UBERON:0003923!3.96e-08!12;UBERON:0003924!3.96e-08!12;UBERON:0003921!3.96e-08!12;UBERON:0002108!5.27e-08!16;UBERON:0007023!8.83e-08!51;UBERON:0002619!1.55e-07!17 | |ontology_enrichment_uberon=UBERON:0000073!3.84e-23!75;UBERON:0001016!3.84e-23!75;UBERON:0001017!5.38e-23!73;UBERON:0005743!5.38e-23!73;UBERON:0004121!2.58e-21!102;UBERON:0000924!2.58e-21!102;UBERON:0006601!2.58e-21!102;UBERON:0001049!1.01e-19!52;UBERON:0005068!1.01e-19!52;UBERON:0006241!1.01e-19!52;UBERON:0007135!1.01e-19!52;UBERON:0000955!4.45e-19!50;UBERON:0006238!4.45e-19!50;UBERON:0002616!1.38e-18!49;UBERON:0000033!6.23e-18!63;UBERON:0002346!1.40e-17!71;UBERON:0003075!1.40e-17!71;UBERON:0007284!1.40e-17!71;UBERON:0003080!9.80e-15!40;UBERON:0002780!3.55e-14!39;UBERON:0001890!3.55e-14!39;UBERON:0006240!3.55e-14!39;UBERON:0002020!1.83e-13!34;UBERON:0007811!1.86e-13!86;UBERON:0003056!1.32e-12!49;UBERON:0002791!1.44e-11!29;UBERON:0003528!1.44e-11!29;UBERON:0001893!1.44e-11!29;UBERON:0000153!2.74e-10!94;UBERON:0000956!1.58e-08!21;UBERON:0001869!1.58e-08!21;UBERON:0000203!1.58e-08!21;UBERON:0001045!1.73e-08!13;UBERON:0001264!3.96e-08!12;UBERON:0003922!3.96e-08!12;UBERON:0002114!3.96e-08!12;UBERON:0003923!3.96e-08!12;UBERON:0003924!3.96e-08!12;UBERON:0003921!3.96e-08!12;UBERON:0002108!5.27e-08!16;UBERON:0007023!8.83e-08!51;UBERON:0002619!1.55e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.68e-23,75;UBERON:0001017,5.15e-23,73;UBERON:0000073,1.06e-20,54;UBERON:0004121,1.40e-20,95;UBERON:0000924,1.40e-20,95;UBERON:0006601,1.40e-20,95;UBERON:0001049,9.75e-20,52;UBERON:0005068,9.75e-20,52;UBERON:0006241,9.75e-20,52;UBERON:0007135,9.75e-20,52;UBERON:0000955,1.56e-17,47;UBERON:0006238,1.56e-17,47;UBERON:0002346,3.71e-17,64;UBERON:0003075,3.71e-17,64;UBERON:0007284,3.71e-17,64;UBERON:0002616,4.73e-17,46;UBERON:0010371,1.10e-15,73;UBERON:0003080,9.54e-15,40;UBERON:0002780,3.46e-14,39;UBERON:0001890,3.46e-14,39;UBERON:0006240,3.46e-14,39;UBERON:0002020,1.78e-13,34;UBERON:0011216,4.37e-13,194;UBERON:0003056,1.29e-12,49;UBERON:0003528,1.41e-11,29;UBERON:0002791,1.41e-11,29;UBERON:0001893,1.41e-11,29;UBERON:0010314,2.45e-11,92;UBERON:0000956,1.55e-08,21;UBERON:0001869,1.55e-08,21;UBERON:0000203,1.55e-08,21;UBERON:0001264,3.91e-08,12;UBERON:0007023,8.20e-08,51;UBERON:0002619,1.54e-07,17 | |||
|phase1_expression=11.69086583865,2.79180326111489,1.81999695755814,0.60492842261366,2.00358291978539,31.8970616632591,29.2015800744407,2.7115897922731,3.801295498095,6.31974221069382,0.68487187290202,0.478632953972018,19.5168832121575,17.6589212886375,1.66554880907831,3.23960427823721,0.699561878128147,3.3123527362615,2.4680598049033,1.27316895539409,16.7535281597607,2.08510997521859,2.87319768052829,8.15961356246374,8.02932483735095,2.29692785646008,10.7690499039769,12.2818602630957,12.7315691035771,12.3494763582366,17.7384408524244,0.635030673459631,0,0,2.88851619751275,4.48833542467929,5.9209113316087,0,0,0,0,0,0,1.88845226963366,1.52065396829272,0.917733760808408,12.5182615095686,15.0437357902508,13.1811709640683,10.4992145500113,23.2377459898102,27.3129872293446,0,8.70434570413613,33.2732861151039,1.54355661621568,2.29226751951005,4.12537673821954,27.5150386769053,29.0945038599618,23.4517619297286,3.72728985276045,25.789549087223,0.449949858640699,0.988866362566974,0,15.2796056364386,23.4373166246148,17.2124756432073,18.2258016747782,16.6156719467592,42.8476476605705,34.8972294703549,16.4137670948038,15.2394298918996,21.1420320920305,53.9567816897005,44.9459430059861,47.310812242923,29.0149833006426,30.6483606068072,17.1901412283731,43.8317308432168,47.2720592426611,48.284246297472,34.7661730858928,30.8946547334053,22.3679334990361,12.9491790599745,12.7715936580468,30.4357713136762,5.16254326188832,2.03991400112325,0,0.649776417447669,0.896053774194671,16.0106638950197,4.09032774187339,2.59786004602869,2.47337702157238,26.6194063377926,0,0,0,4.32982082022428,5.32055717497707,10.1104889002957,13.0169622879728,18.125651855302,27.0164693097981,10.4091196059682,11.5696881758614,13.1450833435953,12.8114244469729,15.8744754633201,7.53999547978053,6.17987419335935,7.95296463059514,3.5384422077995,6.63244084784378,3.97514733228708,3.39412677194655,33.550517019262,47.4304891158706,59.4828647350212,24.0129631896076,0,0,0,57.8191868102616,48.4950638987744,29.7800814507489,66.5747146336419,57.280262441994,52.5703752735687,50.6192740771404,3.25885964321012,3.98102305952298,1.76905930903572,7.99679052368601,2.86264974517948,4.13823787980251,5.04173963454978,6.63101198477146,8.98081788797528,10.1209839025031,13.8678552348399,18.6266426932091,0.862271971731369,0.567318240503458,1.05570674498369,1.7535658594206,2.22437799380478,3.48252166522167,2.88094990971121,2.38841120182192,0,0.257347907114715,0.284163499395593,3.93538967817454,3.04883877975425,3.06105504483725,2.13070262026689,5.3126342571799,4.31947916084659,4.65067889500816,3.48755421819505,3.50296027101508,3.62031669809657,4.26835406605648,5.6748166682099,3.94739966048397,3.29325172936576,4.02619256281115,71.4985825118033,25.9319623195797,21.4772208939469,11.9002754998595,3.41261200856374,5.34144345279009,8.37638498593607,8.47070803418039,7.78323153457046,13.3157938278791,16.1339880925134,7.24675400785648,9.55073793441024,10.3457365461398,14.0374142725766,13.4822911298133,14.6973873914792,24.8926591567959,3.22435431620239,4.22719496655997,0,3.05476991767971,3.10323979468201,3.22624771495465,2.90888070771584,2.95220295959204,2.19798218977925,2.22114895059241,2.07516838961004,1.83529616287703,1.57247196090562,1.12431056192427,2.43432145666204,1.68824011826692,2.29163266603278,2.30156909960649,2.43202840162553,1.92192989231657,0,4.46569137202204,3.43241440426017,2.02063102357689,2.51156378930677,1.92977408545347,22.5398892003258,4.73728529426212,4.72598431681875,5.09235257325564,7.51008794523207,13.0654880804616,14.0445748122748,16.0009591243395,10.5615546551148,9.30151696524855,12.437471955284,11.6342953448174,17.4411831684555,20.1062191428301,0,0,138.185760718349,75.0547949948872,56.5138076757028,58.254208236325,1.96721934452011,8.33154059774431,7.57219726599016,6.24701990874622,20.6806461823487,7.88597033243422,8.91194696329577,9.05844898524264,8.09621403349789,13.151513606009,14.6256477840214,44.0210203497876,9.65192579416227,5.1639025063504,3.90928702448583,6.92874516484649,187.170645059348,16.7518638946937,42.6276215320299,94.3025398779491,157.100607012571,97.456941898225,46.0002361839434,61.0736665522209,63.8130307308651,153.593864356807,213.999775407247,172.236357224472,77.6202301118637,5.76195500900193,11.1248468053169,16.5039516974326,28.3744373827638,26.9336914579127,26.3278432963394,43.5384877233877,8.68285319835728,2.96564899209348,128.126999269933,1.97863503529776,3.06782410722221,2.35220407219808,1.79058516004705,3.28281799490123,15.4484843413821,63.9717291936258,5.80960994712699,7.63631411463923,2.22233432843654,1.50694765603753,1.77702496037333,1.83022538565218,3.0596117398894,1.39951452323658,2.48759952847963,100.240414891587,7.59206384594725,17.2821547057821,17.2808545314882,21.7451827855047,29.9156712332263,35.0647300600534,43.310410800076,67.7947889738637,11.9245775428449,100.035629406995,0,3.13984746692355,1.48912641411388,2.33341426012857,1.03327858782185,1.520605129417,1.40828686374905,2.0832701575032,3.25063967719704,1.20792060413003,1.15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|short_description=p1@C630004H02Rik | |short_description=p1@C630004H02Rik | ||
}} | }} |
Revision as of 18:42, 13 November 2012
Short description: | p1@C630004H02Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C630004H02Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:414 |
Association with transcript: | 0bp_to_ENSMUST00000044152, NM_175454, uc007mhg.1, uc007mhh.1_5end |
EntrezGene: | C630004H02Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.14e-09 | 44 |
neurectodermal cell | 4.14e-09 | 44 |
neural cell | 8.31e-09 | 43 |
CNS neuron (sensu Vertebrata) | 1.93e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.93e-08 | 23 |
neuron | 1.84e-07 | 33 |
neuronal stem cell | 1.84e-07 | 33 |
neuroblast | 1.84e-07 | 33 |
electrically signaling cell | 1.84e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.68e-23 | 75 |
central nervous system | 5.15e-23 | 73 |
regional part of nervous system | 1.06e-20 | 54 |
ectoderm-derived structure | 1.40e-20 | 95 |
ectoderm | 1.40e-20 | 95 |
presumptive ectoderm | 1.40e-20 | 95 |
neural tube | 9.75e-20 | 52 |
neural rod | 9.75e-20 | 52 |
future spinal cord | 9.75e-20 | 52 |
neural keel | 9.75e-20 | 52 |
brain | 1.56e-17 | 47 |
future brain | 1.56e-17 | 47 |
neurectoderm | 3.71e-17 | 64 |
neural plate | 3.71e-17 | 64 |
presumptive neural plate | 3.71e-17 | 64 |
regional part of brain | 4.73e-17 | 46 |
ecto-epithelium | 1.10e-15 | 73 |
anterior neural tube | 9.54e-15 | 40 |
regional part of forebrain | 3.46e-14 | 39 |
forebrain | 3.46e-14 | 39 |
future forebrain | 3.46e-14 | 39 |
gray matter | 1.78e-13 | 34 |
organ system subdivision | 4.37e-13 | 194 |
pre-chordal neural plate | 1.29e-12 | 49 |
brain grey matter | 1.41e-11 | 29 |
regional part of telencephalon | 1.41e-11 | 29 |
telencephalon | 1.41e-11 | 29 |
structure with developmental contribution from neural crest | 2.45e-11 | 92 |
cerebral cortex | 1.55e-08 | 21 |
cerebral hemisphere | 1.55e-08 | 21 |
pallium | 1.55e-08 | 21 |
pancreas | 3.91e-08 | 12 |
adult organism | 8.20e-08 | 51 |
regional part of cerebral cortex | 1.54e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.