FFCP PHASE1:Mm9::chr14:76814539..76814600,+: Difference between revisions
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|id=chr14:76814539..76814600,+ | |id=chr14:76814539..76814600,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.07e-11!23;CL:0000337!5.07e-11!23;CL:0000540!1.98e-10!33;CL:0000047!1.98e-10!33;CL:0000031!1.98e-10!33;CL:0000404!1.98e-10!33;CL:0002319!5.02e-09!43;CL:0000221!1.36e-08!44;CL:0000133!1.36e-08!44;CL:0000393!2.21e-08!39;CL:0000211!2.21e-08!39;CL:0000055!7.30e-07!50 | |ontology_enrichment_celltype=CL:0000117!5.07e-11!23;CL:0000337!5.07e-11!23;CL:0000540!1.98e-10!33;CL:0000047!1.98e-10!33;CL:0000031!1.98e-10!33;CL:0000404!1.98e-10!33;CL:0002319!5.02e-09!43;CL:0000221!1.36e-08!44;CL:0000133!1.36e-08!44;CL:0000393!2.21e-08!39;CL:0000211!2.21e-08!39;CL:0000055!7.30e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.05e-11,23;CL:0000337,5.05e-11,23;CL:0000540,1.97e-10,33;CL:0000047,1.97e-10,33;CL:0000031,1.97e-10,33;CL:0000404,1.97e-10,33;CL:0002319,5.01e-09,43;CL:0000221,1.35e-08,44;CL:0000133,1.35e-08,44;CL:0000393,2.20e-08,39;CL:0000211,2.20e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.66e-25!73;UBERON:0005743!2.66e-25!73;UBERON:0000073!3.94e-24!75;UBERON:0001016!3.94e-24!75;UBERON:0000955!2.01e-22!50;UBERON:0006238!2.01e-22!50;UBERON:0001049!7.81e-22!52;UBERON:0005068!7.81e-22!52;UBERON:0006241!7.81e-22!52;UBERON:0007135!7.81e-22!52;UBERON:0002616!9.94e-22!49;UBERON:0000033!3.33e-20!63;UBERON:0004121!1.08e-19!102;UBERON:0000924!1.08e-19!102;UBERON:0006601!1.08e-19!102;UBERON:0003080!2.60e-18!40;UBERON:0002780!1.19e-17!39;UBERON:0001890!1.19e-17!39;UBERON:0006240!1.19e-17!39;UBERON:0002346!3.52e-17!71;UBERON:0003075!3.52e-17!71;UBERON:0007284!3.52e-17!71;UBERON:0002020!4.73e-17!34;UBERON:0003056!1.46e-16!49;UBERON:0002791!4.67e-16!29;UBERON:0003528!4.67e-16!29;UBERON:0001893!4.67e-16!29;UBERON:0007811!9.16e-14!86;UBERON:0000153!9.76e-14!94;UBERON:0000956!6.04e-12!21;UBERON:0001869!6.04e-12!21;UBERON:0000203!6.04e-12!21;UBERON:0000468!1.26e-10!333;UBERON:0002619!7.37e-10!17;UBERON:0000922!2.81e-08!328;UBERON:0002021!2.67e-07!10;UBERON:0000411!2.67e-07!10;UBERON:0001950!2.67e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!2.66e-25!73;UBERON:0005743!2.66e-25!73;UBERON:0000073!3.94e-24!75;UBERON:0001016!3.94e-24!75;UBERON:0000955!2.01e-22!50;UBERON:0006238!2.01e-22!50;UBERON:0001049!7.81e-22!52;UBERON:0005068!7.81e-22!52;UBERON:0006241!7.81e-22!52;UBERON:0007135!7.81e-22!52;UBERON:0002616!9.94e-22!49;UBERON:0000033!3.33e-20!63;UBERON:0004121!1.08e-19!102;UBERON:0000924!1.08e-19!102;UBERON:0006601!1.08e-19!102;UBERON:0003080!2.60e-18!40;UBERON:0002780!1.19e-17!39;UBERON:0001890!1.19e-17!39;UBERON:0006240!1.19e-17!39;UBERON:0002346!3.52e-17!71;UBERON:0003075!3.52e-17!71;UBERON:0007284!3.52e-17!71;UBERON:0002020!4.73e-17!34;UBERON:0003056!1.46e-16!49;UBERON:0002791!4.67e-16!29;UBERON:0003528!4.67e-16!29;UBERON:0001893!4.67e-16!29;UBERON:0007811!9.16e-14!86;UBERON:0000153!9.76e-14!94;UBERON:0000956!6.04e-12!21;UBERON:0001869!6.04e-12!21;UBERON:0000203!6.04e-12!21;UBERON:0000468!1.26e-10!333;UBERON:0002619!7.37e-10!17;UBERON:0000922!2.81e-08!328;UBERON:0002021!2.67e-07!10;UBERON:0000411!2.67e-07!10;UBERON:0001950!2.67e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.65e-25,73;UBERON:0001016,3.91e-24,75;UBERON:0000073,5.23e-23,54;UBERON:0004121,6.86e-22,95;UBERON:0000924,6.86e-22,95;UBERON:0006601,6.86e-22,95;UBERON:0001049,7.77e-22,52;UBERON:0005068,7.77e-22,52;UBERON:0006241,7.77e-22,52;UBERON:0007135,7.77e-22,52;UBERON:0000955,1.49e-20,47;UBERON:0006238,1.49e-20,47;UBERON:0002346,5.84e-20,64;UBERON:0003075,5.84e-20,64;UBERON:0007284,5.84e-20,64;UBERON:0002616,7.12e-20,46;UBERON:0003080,2.59e-18,40;UBERON:0002780,1.19e-17,39;UBERON:0001890,1.19e-17,39;UBERON:0006240,1.19e-17,39;UBERON:0010371,3.41e-17,73;UBERON:0002020,4.71e-17,34;UBERON:0003056,1.45e-16,49;UBERON:0003528,4.65e-16,29;UBERON:0002791,4.65e-16,29;UBERON:0001893,4.65e-16,29;UBERON:0010314,4.19e-14,92;UBERON:0000956,6.02e-12,21;UBERON:0001869,6.02e-12,21;UBERON:0000203,6.02e-12,21;UBERON:0002619,7.35e-10,17;UBERON:0000922,2.25e-07,320;UBERON:0002021,2.67e-07,10;UBERON:0000411,2.67e-07,10;UBERON:0001950,2.67e-07,10 | |||
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| ||
|short_description=p2@Tsc22d1 | |short_description=p2@Tsc22d1 | ||
}} | }} |
Revision as of 19:42, 13 November 2012
Short description: | p2@Tsc22d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tsc22d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2943 |
Association with transcript: | -167bp_to_ENSMUST00000110888, uc007urh.1_5end |
EntrezGene: | Tsc22d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.05e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.05e-11 | 23 |
neuron | 1.97e-10 | 33 |
neuronal stem cell | 1.97e-10 | 33 |
neuroblast | 1.97e-10 | 33 |
electrically signaling cell | 1.97e-10 | 33 |
neural cell | 5.01e-09 | 43 |
ectodermal cell | 1.35e-08 | 44 |
neurectodermal cell | 1.35e-08 | 44 |
electrically responsive cell | 2.20e-08 | 39 |
electrically active cell | 2.20e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.65e-25 | 73 |
nervous system | 3.91e-24 | 75 |
regional part of nervous system | 5.23e-23 | 54 |
ectoderm-derived structure | 6.86e-22 | 95 |
ectoderm | 6.86e-22 | 95 |
presumptive ectoderm | 6.86e-22 | 95 |
neural tube | 7.77e-22 | 52 |
neural rod | 7.77e-22 | 52 |
future spinal cord | 7.77e-22 | 52 |
neural keel | 7.77e-22 | 52 |
brain | 1.49e-20 | 47 |
future brain | 1.49e-20 | 47 |
neurectoderm | 5.84e-20 | 64 |
neural plate | 5.84e-20 | 64 |
presumptive neural plate | 5.84e-20 | 64 |
regional part of brain | 7.12e-20 | 46 |
anterior neural tube | 2.59e-18 | 40 |
regional part of forebrain | 1.19e-17 | 39 |
forebrain | 1.19e-17 | 39 |
future forebrain | 1.19e-17 | 39 |
ecto-epithelium | 3.41e-17 | 73 |
gray matter | 4.71e-17 | 34 |
pre-chordal neural plate | 1.45e-16 | 49 |
brain grey matter | 4.65e-16 | 29 |
regional part of telencephalon | 4.65e-16 | 29 |
telencephalon | 4.65e-16 | 29 |
structure with developmental contribution from neural crest | 4.19e-14 | 92 |
cerebral cortex | 6.02e-12 | 21 |
cerebral hemisphere | 6.02e-12 | 21 |
pallium | 6.02e-12 | 21 |
regional part of cerebral cortex | 7.35e-10 | 17 |
embryo | 2.25e-07 | 320 |
occipital lobe | 2.67e-07 | 10 |
visual cortex | 2.67e-07 | 10 |
neocortex | 2.67e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.