Personal tools

FFCP PHASE1:Mm9::chr4:9196485..9196509,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr4:9196485..9196509,+
|id=chr4:9196485..9196509,+
|ontology_enrichment_celltype=CL:0000540!1.35e-18!33;CL:0000047!1.35e-18!33;CL:0000031!1.35e-18!33;CL:0000404!1.35e-18!33;CL:0000117!6.12e-14!23;CL:0000337!6.12e-14!23;CL:0000393!2.43e-13!39;CL:0000211!2.43e-13!39;CL:0002319!7.82e-13!43;CL:0000221!3.41e-12!44;CL:0000133!3.41e-12!44;CL:0000055!5.37e-09!50;CL:0000107!7.13e-07!9
|ontology_enrichment_celltype=CL:0000540!1.35e-18!33;CL:0000047!1.35e-18!33;CL:0000031!1.35e-18!33;CL:0000404!1.35e-18!33;CL:0000117!6.12e-14!23;CL:0000337!6.12e-14!23;CL:0000393!2.43e-13!39;CL:0000211!2.43e-13!39;CL:0002319!7.82e-13!43;CL:0000221!3.41e-12!44;CL:0000133!3.41e-12!44;CL:0000055!5.37e-09!50;CL:0000107!7.13e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,6.26e-22,33;CL:0000047,6.26e-22,33;CL:0000031,6.26e-22,33;CL:0000404,6.26e-22,33;CL:0000393,1.55e-16,39;CL:0000211,1.55e-16,39;CL:0000117,3.18e-16,23;CL:0000337,3.18e-16,23;CL:0002319,2.31e-15,43;CL:0000221,1.01e-14,44;CL:0000133,1.01e-14,44;CL:0000107,7.37e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.83e-31!75;UBERON:0001016!2.83e-31!75;UBERON:0001017!5.16e-31!73;UBERON:0005743!5.16e-31!73;UBERON:0002346!5.10e-30!71;UBERON:0003075!5.10e-30!71;UBERON:0007284!5.10e-30!71;UBERON:0004121!1.46e-28!102;UBERON:0000924!1.46e-28!102;UBERON:0006601!1.46e-28!102;UBERON:0001049!3.01e-23!52;UBERON:0005068!3.01e-23!52;UBERON:0006241!3.01e-23!52;UBERON:0007135!3.01e-23!52;UBERON:0000955!2.24e-22!50;UBERON:0006238!2.24e-22!50;UBERON:0000033!2.31e-22!63;UBERON:0002616!1.58e-21!49;UBERON:0003056!4.19e-21!49;UBERON:0002020!1.80e-18!34;UBERON:0003080!4.66e-18!40;UBERON:0002780!2.06e-17!39;UBERON:0001890!2.06e-17!39;UBERON:0006240!2.06e-17!39;UBERON:0002791!1.93e-15!29;UBERON:0003528!1.93e-15!29;UBERON:0001893!1.93e-15!29;UBERON:0007811!3.28e-12!86;UBERON:0000956!7.63e-11!21;UBERON:0001869!7.63e-11!21;UBERON:0000203!7.63e-11!21;UBERON:0000153!2.47e-09!94;UBERON:0002619!1.80e-08!17;UBERON:0002021!3.50e-08!10;UBERON:0000411!3.50e-08!10;UBERON:0001950!3.50e-08!10;UBERON:0002410!7.13e-07!9;UBERON:0000010!8.86e-07!11
|ontology_enrichment_uberon=UBERON:0000073!2.83e-31!75;UBERON:0001016!2.83e-31!75;UBERON:0001017!5.16e-31!73;UBERON:0005743!5.16e-31!73;UBERON:0002346!5.10e-30!71;UBERON:0003075!5.10e-30!71;UBERON:0007284!5.10e-30!71;UBERON:0004121!1.46e-28!102;UBERON:0000924!1.46e-28!102;UBERON:0006601!1.46e-28!102;UBERON:0001049!3.01e-23!52;UBERON:0005068!3.01e-23!52;UBERON:0006241!3.01e-23!52;UBERON:0007135!3.01e-23!52;UBERON:0000955!2.24e-22!50;UBERON:0006238!2.24e-22!50;UBERON:0000033!2.31e-22!63;UBERON:0002616!1.58e-21!49;UBERON:0003056!4.19e-21!49;UBERON:0002020!1.80e-18!34;UBERON:0003080!4.66e-18!40;UBERON:0002780!2.06e-17!39;UBERON:0001890!2.06e-17!39;UBERON:0006240!2.06e-17!39;UBERON:0002791!1.93e-15!29;UBERON:0003528!1.93e-15!29;UBERON:0001893!1.93e-15!29;UBERON:0007811!3.28e-12!86;UBERON:0000956!7.63e-11!21;UBERON:0001869!7.63e-11!21;UBERON:0000203!7.63e-11!21;UBERON:0000153!2.47e-09!94;UBERON:0002619!1.80e-08!17;UBERON:0002021!3.50e-08!10;UBERON:0000411!3.50e-08!10;UBERON:0001950!3.50e-08!10;UBERON:0002410!7.13e-07!9;UBERON:0000010!8.86e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.92e-32,75;UBERON:0001017,6.31e-32,73;UBERON:0002346,1.84e-29,64;UBERON:0003075,1.84e-29,64;UBERON:0007284,1.84e-29,64;UBERON:0004121,2.64e-29,95;UBERON:0000924,2.64e-29,95;UBERON:0006601,2.64e-29,95;UBERON:0000073,1.23e-24,54;UBERON:0010371,3.66e-23,73;UBERON:0001049,6.14e-23,52;UBERON:0005068,6.14e-23,52;UBERON:0006241,6.14e-23,52;UBERON:0007135,6.14e-23,52;UBERON:0002020,5.80e-22,34;UBERON:0003056,3.18e-20,49;UBERON:0000955,2.07e-19,47;UBERON:0006238,2.07e-19,47;UBERON:0002616,1.71e-18,46;UBERON:0003528,2.33e-18,29;UBERON:0002791,2.33e-18,29;UBERON:0001893,2.33e-18,29;UBERON:0010314,1.44e-17,92;UBERON:0003080,1.22e-16,40;UBERON:0002780,6.41e-16,39;UBERON:0001890,6.41e-16,39;UBERON:0006240,6.41e-16,39;UBERON:0000956,6.74e-13,21;UBERON:0001869,6.74e-13,21;UBERON:0000203,6.74e-13,21;UBERON:0002619,4.47e-10,17;UBERON:0002021,2.09e-09,10;UBERON:0000411,2.09e-09,10;UBERON:0001950,2.09e-09,10;UBERON:0002410,7.37e-08,9;UBERON:0000010,9.53e-08,11;UBERON:0003076,5.62e-07,12;UBERON:0003057,5.62e-07,12
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,12.6957835025288,3.80298842103708,0,0,0,0,0,0,0.384218305321555,15.7608210708886,11.340498819862,11.3575479129746,6.85562362569129,6.84692476950002,7.83941114975706,6.03826467414889,6.43453150627015,18.7196997698961,16.5993539510744,19.2008166570304,14.1118327871307,11.3444678066988,13.5437476344758,9.77140496504833,6.19038871034848,9.16789486660861,17.0884579574727,15.3761415263031,15.2847545576746,1.06016670666458,1.058001841495,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,1.48442139064825,2.08182392119363,1.82679286987285,0.922461989024234,2.71300752994721,1.52865319276416,0.251333182659351,0,0.289198713839823,0,0,0,0,0,41.5748731756397,34.5587066242201,0,0,0,0,14.379901382863,41.1750542536764,11.4345460422707,18.251553620189,9.2057564638919,27.4280218818619,21.7403292510795,0,0,0,1.05220927943237,1.95180664444056,2.75882525320168,3.06105620669094,2.86339153887859,4.55844544313897,5.89323113310309,4.49768277886698,4.39795730256327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,15.1408762966172,9.57012895127345,0,0,3.19932375802851,5.10920678092965,2.57734922644187,3.22693639397348,2.44615848229357,0.951128130562796,0.949058123089023,0.988193728344065,0.502670417600539,1.1937388322469,0.58489226135736,0,0,0.597423819763102,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.509235257325564,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,17.9816660786327,13.0104972117346,0,0,11.6738041184015,18.7410597262386,26.0662311256687,3.10659437338318,8.46634961513098,10.4738316391868,13.7635638569464,23.0882127749936,33.5994611254545,38.237236654195,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,17.0219802876894,0.540183282093931,0.388076051348264,0.428674070063185,0.532020700926821,0.891844088010353,1.31639216481697,0.913394847343798,12.2029288193129,1.0591603543191,1.10264199027481,0,0,0,0,0,0.291480836629851,20.7676338251771,0,0,0,0,0,0,0,0,0,0,4.74503990371703,3.65975040828328,1.83609079397062,2.09088296014469,1.52853794622324,0.674321731924103,0.661227645802687,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.93841237725591,0,0,0,20.3310663342144,21.1749608793301,25.2074025913335,18.7319968754619,15.7568979547248,12.0863023582352,17.550585006027,13.5096360967266,15.8599843144472,15.0150490408028,4.15149390336707,11.5717213286299,6.65861062441123,4.86213434136588,1.88651846365184,1.2869045591501,3.11145418922261,2.47242068686673,2.88827288632634,3.03236654116557,4.05566879824384,2.45214243801899,2.99652823903624,2.4969809437899,2.35485422718014,2.85776214769844,3.1288768005111,2.31491064556446,2.06042950401653,2.06078488188156,1.37147700954166,1.77475806159337,1.90748951957857,3.19762116591123,2.72917203204459,2.11536519729191,2.74391959309159,2.10455769150274,3.93831930152999,1.68342681497322,1.54225523561426,2.56111654176465,2.04615521584845,2.63392630016142,1.15743966588685,4.74640098082097,2.57324769289949,3.22306581072447,0.765153328275374,0.441182838239031,1.15933917810211
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71119012126069,12.6957835025288,3.80298842103708,0,0,0,0,0,0,0.384218305321555,15.7608210708886,11.340498819862,11.3575479129746,6.85562362569129,6.84692476950002,7.83941114975706,6.03826467414889,6.43453150627015,18.7196997698961,16.5993539510744,19.2008166570304,14.1118327871307,11.3444678066988,13.5437476344758,9.77140496504833,6.19038871034848,9.16789486660861,17.0884579574727,15.3761415263031,15.2847545576746,1.06016670666458,1.058001841495,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,1.48442139064825,2.08182392119363,1.82679286987285,0.922461989024234,2.71300752994721,1.52865319276416,0.251333182659351,0,0.289198713839823,0,0,0,0,0,41.5748731756397,34.5587066242201,0,0,0,0,14.379901382863,41.1750542536764,11.4345460422707,18.251553620189,9.2057564638919,27.4280218818619,21.7403292510795,0,0,0,1.05220927943237,1.95180664444056,2.75882525320168,3.06105620669094,2.86339153887859,4.55844544313897,5.89323113310309,4.49768277886698,4.39795730256327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,15.1408762966172,9.57012895127345,0,0,3.19932375802851,5.10920678092965,2.57734922644187,3.22693639397348,2.44615848229357,0.951128130562796,0.949058123089023,0.988193728344065,0.502670417600539,1.1937388322469,0.58489226135736,0,0,0.597423819763102,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.509235257325564,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,17.9816660786327,13.0104972117346,0,0,11.6738041184015,18.7410597262386,26.0662311256687,3.10659437338318,8.46634961513098,10.4738316391868,13.7635638569464,23.0882127749936,33.5994611254545,38.237236654195,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,17.0219802876894,0.540183282093931,0.388076051348264,0.428674070063185,0.532020700926821,0.891844088010353,1.31639216481697,0.913394847343798,12.2029288193129,1.0591603543191,1.10264199027481,0,0,0,0,0,0.291480836629851,20.7676338251771,0,0,0,0,0,0,0,0,0,0,4.74503990371703,3.65975040828328,1.83609079397062,2.09088296014469,1.52853794622324,0.674321731924103,0.661227645802687,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.93841237725591,0,0,0,20.3310663342144,21.1749608793301,25.2074025913335,18.7319968754619,15.7568979547248,12.0863023582352,17.550585006027,13.5096360967266,15.8599843144472,15.0150490408028,4.15149390336707,11.5717213286299,6.65861062441123,4.86213434136588,1.88651846365184,1.2869045591501,3.11145418922261,2.47242068686673,2.88827288632634,3.03236654116557,4.05566879824384,2.45214243801899,2.99652823903624,2.4969809437899,2.35485422718014,2.85776214769844,3.1288768005111,2.31491064556446,2.06042950401653,2.06078488188156,1.37147700954166,1.77475806159337,1.90748951957857,3.19762116591123,2.72917203204459,2.11536519729191,2.74391959309159,2.10455769150274,3.93831930152999,1.68342681497322,1.54225523561426,2.56111654176465,2.04615521584845,2.63392630016142,1.15743966588685,4.74640098082097,2.57324769289949,3.22306581072447,0.765153328275374,0.441182838239031,1.15933917810211
|short_description=p2@Clvs1
|short_description=p2@Clvs1
}}
}}

Revision as of 10:08, 14 November 2012

Short description:p2@Clvs1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Clvs1_5end
Coexpression cluster:MCL_coexpression_mm9:281
Association with transcript: 0bp_to_ENSMUST00000141734_5end
EntrezGene:Clvs1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Clvs1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.71
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B241.57
cerebellum, neonate N30.CNhs11135.1395-42I234.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.38
corpus striatum, adult.CNhs10487.19-21D841.18
corpus striatum, neonate N00.CNhs11226.630-43F111.43
cortex, adult.CNhs10473.12-14D518.25
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F227.43
diencephalon, neonate N30.CNhs11201.1388-42B221.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C64.56
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G84.50
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G19.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C217.98
medulla oblongata, neonate N30.CNhs11200.1396-42A313.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.07
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.60
olfactory brain, adult.CNhs10489.18-22I938.24
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G817.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I712.20
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C920.77
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.75
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H26.66
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system2.92e-3275
central nervous system6.31e-3273
neurectoderm1.84e-2964
neural plate1.84e-2964
presumptive neural plate1.84e-2964
ectoderm-derived structure2.64e-2995
ectoderm2.64e-2995
presumptive ectoderm2.64e-2995
regional part of nervous system1.23e-2454
ecto-epithelium3.66e-2373
neural tube6.14e-2352
neural rod6.14e-2352
future spinal cord6.14e-2352
neural keel6.14e-2352
gray matter5.80e-2234
pre-chordal neural plate3.18e-2049
brain2.07e-1947
future brain2.07e-1947
regional part of brain1.71e-1846
brain grey matter2.33e-1829
regional part of telencephalon2.33e-1829
telencephalon2.33e-1829
structure with developmental contribution from neural crest1.44e-1792
anterior neural tube1.22e-1640
regional part of forebrain6.41e-1639
forebrain6.41e-1639
future forebrain6.41e-1639
cerebral cortex6.74e-1321
cerebral hemisphere6.74e-1321
pallium6.74e-1321
regional part of cerebral cortex4.47e-1017
occipital lobe2.09e-0910
visual cortex2.09e-0910
neocortex2.09e-0910
autonomic nervous system7.37e-089
peripheral nervous system9.53e-0811
posterior neural tube5.62e-0712
chordal neural plate5.62e-0712







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:9196485..9196509,%2B&oldid=2313216"