FFCP PHASE1:Mm9::chr3:107434599..107434623,-: Difference between revisions
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|id=chr3:107434599..107434623,- | |id=chr3:107434599..107434623,- | ||
|ontology_enrichment_celltype=CL:0000540!1.40e-16!33;CL:0000047!1.40e-16!33;CL:0000031!1.40e-16!33;CL:0000404!1.40e-16!33;CL:0000221!1.53e-15!44;CL:0000133!1.53e-15!44;CL:0002319!2.28e-15!43;CL:0000117!3.35e-14!23;CL:0000337!3.35e-14!23;CL:0000393!1.12e-12!39;CL:0000211!1.12e-12!39;CL:0000055!2.49e-11!50;CL:0002321!1.63e-08!70;CL:0000220!1.63e-08!70 | |ontology_enrichment_celltype=CL:0000540!1.40e-16!33;CL:0000047!1.40e-16!33;CL:0000031!1.40e-16!33;CL:0000404!1.40e-16!33;CL:0000221!1.53e-15!44;CL:0000133!1.53e-15!44;CL:0002319!2.28e-15!43;CL:0000117!3.35e-14!23;CL:0000337!3.35e-14!23;CL:0000393!1.12e-12!39;CL:0000211!1.12e-12!39;CL:0000055!2.49e-11!50;CL:0002321!1.63e-08!70;CL:0000220!1.63e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.40e-16,33;CL:0000047,1.40e-16,33;CL:0000031,1.40e-16,33;CL:0000404,1.40e-16,33;CL:0000221,1.53e-15,44;CL:0000133,1.53e-15,44;CL:0002319,2.28e-15,43;CL:0000117,3.35e-14,23;CL:0000337,3.35e-14,23;CL:0000393,1.12e-12,39;CL:0000211,1.12e-12,39;CL:0002321,1.63e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.52e-26!73;UBERON:0005743!5.52e-26!73;UBERON:0000073!1.94e-24!75;UBERON:0001016!1.94e-24!75;UBERON:0004121!8.92e-23!102;UBERON:0000924!8.92e-23!102;UBERON:0006601!8.92e-23!102;UBERON:0000033!1.25e-19!63;UBERON:0001049!6.34e-19!52;UBERON:0005068!6.34e-19!52;UBERON:0006241!6.34e-19!52;UBERON:0007135!6.34e-19!52;UBERON:0002346!3.20e-18!71;UBERON:0003075!3.20e-18!71;UBERON:0007284!3.20e-18!71;UBERON:0003056!1.18e-17!49;UBERON:0000955!5.14e-17!50;UBERON:0006238!5.14e-17!50;UBERON:0002020!6.28e-17!34;UBERON:0002616!1.32e-16!49;UBERON:0003080!3.93e-15!40;UBERON:0002780!9.91e-15!39;UBERON:0001890!9.91e-15!39;UBERON:0006240!9.91e-15!39;UBERON:0000153!4.17e-14!94;UBERON:0002791!8.58e-14!29;UBERON:0003528!8.58e-14!29;UBERON:0001893!8.58e-14!29;UBERON:0007811!1.27e-13!86;UBERON:0000956!1.30e-10!21;UBERON:0001869!1.30e-10!21;UBERON:0000203!1.30e-10!21;UBERON:0002619!2.05e-08!17 | |ontology_enrichment_uberon=UBERON:0001017!5.52e-26!73;UBERON:0005743!5.52e-26!73;UBERON:0000073!1.94e-24!75;UBERON:0001016!1.94e-24!75;UBERON:0004121!8.92e-23!102;UBERON:0000924!8.92e-23!102;UBERON:0006601!8.92e-23!102;UBERON:0000033!1.25e-19!63;UBERON:0001049!6.34e-19!52;UBERON:0005068!6.34e-19!52;UBERON:0006241!6.34e-19!52;UBERON:0007135!6.34e-19!52;UBERON:0002346!3.20e-18!71;UBERON:0003075!3.20e-18!71;UBERON:0007284!3.20e-18!71;UBERON:0003056!1.18e-17!49;UBERON:0000955!5.14e-17!50;UBERON:0006238!5.14e-17!50;UBERON:0002020!6.28e-17!34;UBERON:0002616!1.32e-16!49;UBERON:0003080!3.93e-15!40;UBERON:0002780!9.91e-15!39;UBERON:0001890!9.91e-15!39;UBERON:0006240!9.91e-15!39;UBERON:0000153!4.17e-14!94;UBERON:0002791!8.58e-14!29;UBERON:0003528!8.58e-14!29;UBERON:0001893!8.58e-14!29;UBERON:0007811!1.27e-13!86;UBERON:0000956!1.30e-10!21;UBERON:0001869!1.30e-10!21;UBERON:0000203!1.30e-10!21;UBERON:0002619!2.05e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.36e-26,95;UBERON:0000924,3.36e-26,95;UBERON:0006601,3.36e-26,95;UBERON:0001017,5.52e-26,73;UBERON:0001016,1.94e-24,75;UBERON:0002346,3.62e-22,64;UBERON:0003075,3.62e-22,64;UBERON:0007284,3.62e-22,64;UBERON:0010371,3.90e-21,73;UBERON:0000073,9.26e-20,54;UBERON:0001049,6.34e-19,52;UBERON:0005068,6.34e-19,52;UBERON:0006241,6.34e-19,52;UBERON:0007135,6.34e-19,52;UBERON:0003056,1.18e-17,49;UBERON:0002020,6.28e-17,34;UBERON:0000955,4.18e-16,47;UBERON:0006238,4.18e-16,47;UBERON:0002616,1.06e-15,46;UBERON:0003080,3.93e-15,40;UBERON:0002780,9.91e-15,39;UBERON:0001890,9.91e-15,39;UBERON:0006240,9.91e-15,39;UBERON:0010314,1.52e-14,92;UBERON:0003528,8.58e-14,29;UBERON:0002791,8.58e-14,29;UBERON:0001893,8.58e-14,29;UBERON:0000956,1.30e-10,21;UBERON:0001869,1.30e-10,21;UBERON:0000203,1.30e-10,21;UBERON:0002619,2.05e-08,17 | |||
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| ||
|short_description=p1@Fam40a | |short_description=p1@Fam40a | ||
}} | }} |
Revision as of 12:23, 14 November 2012
Short description: | p1@Fam40a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam40a_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 4bp_to_ENSMUST00000064759, ENSMUST00000106707, NM_153563, uc008qxg.2, uc008qxh.2_5end |
EntrezGene: | Fam40a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.40e-16 | 33 |
neuronal stem cell | 1.40e-16 | 33 |
neuroblast | 1.40e-16 | 33 |
electrically signaling cell | 1.40e-16 | 33 |
ectodermal cell | 1.53e-15 | 44 |
neurectodermal cell | 1.53e-15 | 44 |
neural cell | 2.28e-15 | 43 |
CNS neuron (sensu Vertebrata) | 3.35e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.35e-14 | 23 |
electrically responsive cell | 1.12e-12 | 39 |
electrically active cell | 1.12e-12 | 39 |
embryonic cell | 1.63e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.36e-26 | 95 |
ectoderm | 3.36e-26 | 95 |
presumptive ectoderm | 3.36e-26 | 95 |
central nervous system | 5.52e-26 | 73 |
nervous system | 1.94e-24 | 75 |
neurectoderm | 3.62e-22 | 64 |
neural plate | 3.62e-22 | 64 |
presumptive neural plate | 3.62e-22 | 64 |
ecto-epithelium | 3.90e-21 | 73 |
regional part of nervous system | 9.26e-20 | 54 |
neural tube | 6.34e-19 | 52 |
neural rod | 6.34e-19 | 52 |
future spinal cord | 6.34e-19 | 52 |
neural keel | 6.34e-19 | 52 |
pre-chordal neural plate | 1.18e-17 | 49 |
gray matter | 6.28e-17 | 34 |
brain | 4.18e-16 | 47 |
future brain | 4.18e-16 | 47 |
regional part of brain | 1.06e-15 | 46 |
anterior neural tube | 3.93e-15 | 40 |
regional part of forebrain | 9.91e-15 | 39 |
forebrain | 9.91e-15 | 39 |
future forebrain | 9.91e-15 | 39 |
structure with developmental contribution from neural crest | 1.52e-14 | 92 |
brain grey matter | 8.58e-14 | 29 |
regional part of telencephalon | 8.58e-14 | 29 |
telencephalon | 8.58e-14 | 29 |
cerebral cortex | 1.30e-10 | 21 |
cerebral hemisphere | 1.30e-10 | 21 |
pallium | 1.30e-10 | 21 |
regional part of cerebral cortex | 2.05e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.