FFCP PHASE1:Mm9::chr8:26711938..26711949,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr8:26711938..26711949,+ | |id=chr8:26711938..26711949,+ | ||
|ontology_enrichment_celltype=CL:0000838!6.03e-10!12;CL:0000791!1.24e-09!9;CL:0000789!1.24e-09!9;CL:0002420!1.24e-09!9;CL:0002419!1.24e-09!9;CL:0000790!1.24e-09!9;CL:0000084!3.98e-09!11;CL:0000827!3.98e-09!11;CL:0000542!5.54e-09!13;CL:0000051!5.54e-09!13;CL:0000624!2.89e-08!8;CL:0002320!3.25e-08!46;CL:0000134!3.25e-08!46;CL:0000738!8.52e-08!17;CL:0002087!8.52e-08!17;CL:0000988!2.94e-07!32;CL:0002032!2.94e-07!32;CL:0000037!2.94e-07!32;CL:0000566!2.94e-07!32;CL:0000837!2.94e-07!32 | |ontology_enrichment_celltype=CL:0000838!6.03e-10!12;CL:0000791!1.24e-09!9;CL:0000789!1.24e-09!9;CL:0002420!1.24e-09!9;CL:0002419!1.24e-09!9;CL:0000790!1.24e-09!9;CL:0000084!3.98e-09!11;CL:0000827!3.98e-09!11;CL:0000542!5.54e-09!13;CL:0000051!5.54e-09!13;CL:0000624!2.89e-08!8;CL:0002320!3.25e-08!46;CL:0000134!3.25e-08!46;CL:0000738!8.52e-08!17;CL:0002087!8.52e-08!17;CL:0000988!2.94e-07!32;CL:0002032!2.94e-07!32;CL:0000037!2.94e-07!32;CL:0000566!2.94e-07!32;CL:0000837!2.94e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.88e-19,9;CL:0000789,2.88e-19,9;CL:0002420,2.88e-19,9;CL:0002419,2.88e-19,9;CL:0000790,2.88e-19,9;CL:0000084,8.96e-16,11;CL:0000827,8.96e-16,11;CL:0000838,1.84e-14,12;CL:0000624,4.18e-14,8;CL:0000542,2.38e-13,13;CL:0000051,2.38e-13,13;CL:0000738,3.33e-10,17;CL:0002087,3.33e-10,17;CL:0000815,1.84e-08,1;CL:0000792,1.84e-08,1;CL:0000625,2.16e-08,1;CL:0000213,7.68e-08,1;CL:0002078,7.68e-08,1;CL:0000115,7.68e-08,1;CL:0002262,7.68e-08,1;CL:1000398,7.68e-08,1;CL:0002031,6.50e-07,25;CL:0002320,9.32e-07,46;CL:0000134,9.32e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.01e-10,3;DOID:4045,5.01e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.25e-08!46 | |ontology_enrichment_uberon=UBERON:0002384!3.25e-08!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.01e-10,3;UBERON:0000478,5.01e-10,3;UBERON:0000158,5.01e-10,3;UBERON:0000305,1.56e-08,1;UBERON:0002394,7.68e-08,1;UBERON:0001281,7.68e-08,1;UBERON:0000353,7.68e-08,1;UBERON:0003497,7.68e-08,1;UBERON:0003909,7.68e-08,1;UBERON:0003928,7.68e-08,1;UBERON:0003835,7.68e-08,1;UBERON:0003513,7.68e-08,1;UBERON:0001280,7.68e-08,1;UBERON:0004647,7.68e-08,1;UBERON:0002294,7.68e-08,1;UBERON:0001173,7.68e-08,1;UBERON:0004912,7.68e-08,1;UBERON:0005171,7.68e-08,1;UBERON:0002384,9.32e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,6.45616617207881,0.281577444303333,0.234064526321993,0,0.0797721589953364,2.56801094896809,2.97229368224591,0,0.202475267389826,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,2.92972141515835,1.5626706890476,0.523523743973798,1.76469446409304,2.04913645487534,0.971020706062307,0.125896817975577,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0.860423876981386,0,1.07940638327563,0,0.896053774194671,0,0,0.519572009205738,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,0,0,0,0,0,0,7.91023896749996,0,0,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.0591603543191,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.192423683280659,0,0,0.221985953374065,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0.467225281191051,6.45616617207881,0.281577444303333,0.234064526321993,0,0.0797721589953364,2.56801094896809,2.97229368224591,0,0.202475267389826,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,2.92972141515835,1.5626706890476,0.523523743973798,1.76469446409304,2.04913645487534,0.971020706062307,0.125896817975577,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0.860423876981386,0,1.07940638327563,0,0.896053774194671,0,0,0.519572009205738,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,0,0,0,0,0,0,7.91023896749996,0,0,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.0591603543191,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.192423683280659,0,0,0.221985953374065,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0 | ||
|short_description=p10@Whsc1l1 | |short_description=p10@Whsc1l1 | ||
}} | }} |
Revision as of 14:50, 14 November 2012
Short description: | p10@Whsc1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Whsc1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1501 |
Association with transcript: | -123bp_to_ENSMUST00000155861_5end |
EntrezGene: | Whsc1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.88e-19 | 9 |
alpha-beta T cell | 2.88e-19 | 9 |
immature T cell | 2.88e-19 | 9 |
mature T cell | 2.88e-19 | 9 |
immature alpha-beta T cell | 2.88e-19 | 9 |
T cell | 8.96e-16 | 11 |
pro-T cell | 8.96e-16 | 11 |
lymphoid lineage restricted progenitor cell | 1.84e-14 | 12 |
CD4-positive, alpha-beta T cell | 4.18e-14 | 8 |
lymphocyte | 2.38e-13 | 13 |
common lymphoid progenitor | 2.38e-13 | 13 |
leukocyte | 3.33e-10 | 17 |
nongranular leukocyte | 3.33e-10 | 17 |
regulatory T cell | 1.84e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.84e-08 | 1 |
CD8-positive, alpha-beta T cell | 2.16e-08 | 1 |
lining cell | 7.68e-08 | 1 |
meso-epithelial cell | 7.68e-08 | 1 |
endothelial cell | 7.68e-08 | 1 |
endothelial cell of sinusoid | 7.68e-08 | 1 |
endothelial cell of hepatic sinusoid | 7.68e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 6.50e-07 | 25 |
connective tissue cell | 9.32e-07 | 46 |
mesenchymal cell | 9.32e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.01e-10 | 3 |
extraembryonic structure | 5.01e-10 | 3 |
membranous layer | 5.01e-10 | 3 |
amnion | 1.56e-08 | 1 |
bile duct | 7.68e-08 | 1 |
hepatic sinusoid | 7.68e-08 | 1 |
parenchyma | 7.68e-08 | 1 |
abdomen blood vessel | 7.68e-08 | 1 |
sinusoid | 7.68e-08 | 1 |
digestive system duct | 7.68e-08 | 1 |
abdominal segment blood vessel | 7.68e-08 | 1 |
trunk blood vessel | 7.68e-08 | 1 |
liver parenchyma | 7.68e-08 | 1 |
liver lobule | 7.68e-08 | 1 |
biliary system | 7.68e-08 | 1 |
biliary tree | 7.68e-08 | 1 |
biliary bud | 7.68e-08 | 1 |
hepatic duct | 7.68e-08 | 1 |
connective tissue | 9.32e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.01e-10 | 3 |
muscle cancer | 5.01e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.