Personal tools

FFCP PHASE1:Mm9::chr7:54389067..54389090,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr7:54389067..54389090,-
|id=chr7:54389067..54389090,-
|ontology_enrichment_celltype=CL:0000117!3.45e-16!23;CL:0000337!3.45e-16!23;CL:0000540!7.02e-09!33;CL:0000047!7.02e-09!33;CL:0000031!7.02e-09!33;CL:0000404!7.02e-09!33;CL:0000393!1.47e-08!39;CL:0000211!1.47e-08!39
|ontology_enrichment_celltype=CL:0000117!3.45e-16!23;CL:0000337!3.45e-16!23;CL:0000540!7.02e-09!33;CL:0000047!7.02e-09!33;CL:0000031!7.02e-09!33;CL:0000404!7.02e-09!33;CL:0000393!1.47e-08!39;CL:0000211!1.47e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-28,23;CL:0000337,1.92e-28,23;CL:0000540,1.58e-18,33;CL:0000047,1.58e-18,33;CL:0000031,1.58e-18,33;CL:0000404,1.58e-18,33;CL:0000393,5.00e-15,39;CL:0000211,5.00e-15,39;CL:0002319,3.06e-13,43;CL:0000221,7.61e-13,44;CL:0000133,7.61e-13,44;CL:0002610,1.25e-08,3;CL:0002613,1.96e-08,3;CL:0002614,4.03e-08,3;CL:0000120,4.75e-08,3;CL:0002612,5.02e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.05e-21!52;UBERON:0005068!1.05e-21!52;UBERON:0006241!1.05e-21!52;UBERON:0007135!1.05e-21!52;UBERON:0000955!6.14e-20!50;UBERON:0006238!6.14e-20!50;UBERON:0001017!2.08e-19!73;UBERON:0005743!2.08e-19!73;UBERON:0002616!3.72e-19!49;UBERON:0000073!2.03e-18!75;UBERON:0001016!2.03e-18!75;UBERON:0002020!1.60e-17!34;UBERON:0000033!5.20e-17!63;UBERON:0002346!8.83e-16!71;UBERON:0003075!8.83e-16!71;UBERON:0007284!8.83e-16!71;UBERON:0003080!9.59e-15!40;UBERON:0002780!7.77e-14!39;UBERON:0001890!7.77e-14!39;UBERON:0006240!7.77e-14!39;UBERON:0003056!2.51e-13!49;UBERON:0002791!4.80e-13!29;UBERON:0003528!4.80e-13!29;UBERON:0001893!4.80e-13!29;UBERON:0004121!1.14e-12!102;UBERON:0000924!1.14e-12!102;UBERON:0006601!1.14e-12!102;UBERON:0002420!8.59e-09!8;UBERON:0007245!8.59e-09!8;UBERON:0010009!8.59e-09!8;UBERON:0010011!8.59e-09!8;UBERON:0000454!8.59e-09!8;UBERON:0007811!1.22e-08!86;UBERON:0003076!7.73e-08!12;UBERON:0003057!7.73e-08!12;UBERON:0002298!4.34e-07!6;UBERON:0002240!4.65e-07!6;UBERON:0005174!4.65e-07!6;UBERON:0001137!4.65e-07!6;UBERON:0000153!7.86e-07!94
|ontology_enrichment_uberon=UBERON:0001049!1.05e-21!52;UBERON:0005068!1.05e-21!52;UBERON:0006241!1.05e-21!52;UBERON:0007135!1.05e-21!52;UBERON:0000955!6.14e-20!50;UBERON:0006238!6.14e-20!50;UBERON:0001017!2.08e-19!73;UBERON:0005743!2.08e-19!73;UBERON:0002616!3.72e-19!49;UBERON:0000073!2.03e-18!75;UBERON:0001016!2.03e-18!75;UBERON:0002020!1.60e-17!34;UBERON:0000033!5.20e-17!63;UBERON:0002346!8.83e-16!71;UBERON:0003075!8.83e-16!71;UBERON:0007284!8.83e-16!71;UBERON:0003080!9.59e-15!40;UBERON:0002780!7.77e-14!39;UBERON:0001890!7.77e-14!39;UBERON:0006240!7.77e-14!39;UBERON:0003056!2.51e-13!49;UBERON:0002791!4.80e-13!29;UBERON:0003528!4.80e-13!29;UBERON:0001893!4.80e-13!29;UBERON:0004121!1.14e-12!102;UBERON:0000924!1.14e-12!102;UBERON:0006601!1.14e-12!102;UBERON:0002420!8.59e-09!8;UBERON:0007245!8.59e-09!8;UBERON:0010009!8.59e-09!8;UBERON:0010011!8.59e-09!8;UBERON:0000454!8.59e-09!8;UBERON:0007811!1.22e-08!86;UBERON:0003076!7.73e-08!12;UBERON:0003057!7.73e-08!12;UBERON:0002298!4.34e-07!6;UBERON:0002240!4.65e-07!6;UBERON:0005174!4.65e-07!6;UBERON:0001137!4.65e-07!6;UBERON:0000153!7.86e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-29,73;UBERON:0000073,1.94e-29,54;UBERON:0001016,9.89e-29,75;UBERON:0001049,1.42e-25,52;UBERON:0005068,1.42e-25,52;UBERON:0006241,1.42e-25,52;UBERON:0007135,1.42e-25,52;UBERON:0002020,3.38e-21,34;UBERON:0004121,3.64e-21,95;UBERON:0000924,3.64e-21,95;UBERON:0006601,3.64e-21,95;UBERON:0002346,1.26e-19,64;UBERON:0003075,1.26e-19,64;UBERON:0007284,1.26e-19,64;UBERON:0002420,1.06e-18,8;UBERON:0007245,1.06e-18,8;UBERON:0010009,1.06e-18,8;UBERON:0010011,1.06e-18,8;UBERON:0000454,1.06e-18,8;UBERON:0000955,2.17e-17,47;UBERON:0006238,2.17e-17,47;UBERON:0010371,1.88e-16,73;UBERON:0002616,4.50e-16,46;UBERON:0003076,8.20e-15,12;UBERON:0003057,8.20e-15,12;UBERON:0002240,1.33e-14,6;UBERON:0005174,1.33e-14,6;UBERON:0001137,1.33e-14,6;UBERON:0003080,1.84e-13,40;UBERON:0003528,7.45e-13,29;UBERON:0002791,7.45e-13,29;UBERON:0001893,7.45e-13,29;UBERON:0001948,1.20e-12,5;UBERON:0002315,1.20e-12,5;UBERON:0000369,3.56e-12,5;UBERON:0002435,3.56e-12,5;UBERON:0000204,3.56e-12,5;UBERON:0010082,3.56e-12,5;UBERON:0002780,5.61e-12,39;UBERON:0001890,5.61e-12,39;UBERON:0006240,5.61e-12,39;UBERON:0010314,8.46e-12,92;UBERON:0002950,1.34e-10,4;UBERON:0001891,1.34e-10,4;UBERON:0009616,1.34e-10,4;UBERON:0010286,1.34e-10,4;UBERON:0003056,2.93e-10,49;UBERON:0004684,1.25e-08,3;UBERON:0002275,1.25e-08,3;UBERON:0000025,2.28e-08,114;UBERON:0002038,4.03e-08,3;UBERON:0009663,4.03e-08,3;UBERON:0009661,4.03e-08,3;UBERON:0000125,4.03e-08,3;UBERON:0002308,4.03e-08,3;UBERON:0002257,5.02e-08,3;UBERON:0004111,1.96e-07,122
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0,6.27181028664753,7.93486468908049,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,7.9982275633065,5.96345060569357,0.61245399607477,0.383381884072945,0,8.8092704799511,7.02280359468532,5.9906547969935,6.19865552331911,8.41686321142169,5.2091337055676,5.862842979029,5.6276261003168,5.95913166329559,4.12480019663135,7.68807076315156,4.47358669980721,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,10.0359728401231,3.20250421973039,2.01046963380583,2.25971616249959,2.04572365864264,7.48036960414416,4.86723789203273,0,0,0.758168275301024,0,0.130120442962704,0.229902104433473,0,0.30140963567143,0.476255494059295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,2.26390147234426,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0,0,0,0,0,0,0,0,4.97706828962155,3.7507739709505,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646793418913773,0.214337035031592,0.532020700926821,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0.564751842617067,0.920650473014354,0.572895513439397,0.171853182343688,0.685082519770642,0,0.675022500231806,3.15224842256954,1.35942722695261,4.14208249401456,0.207574695168353,0,0.853668028770671,0.486213434136588,0.628839487883947,0.919217542250071,0.888986911206461,1.03017528619447,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.749132059759059,0.89635213366817,0.516919220600519,0.476293691283074,0.579421629724277,0.38581844092741,0,0.588795680537589,1.37147700954166,1.06485483695602,0.476872379894642,0.581385666529314,1.12931256498397,0.676916863133412,0.182927972872773,0,0.543216455383447,0.561142271657738,0.593175090620871,0.591026894253381,0.818462086339379,0.464810523557898,0.192906610981141,1.49886346762768,0.701794825336225,0.429742108096597,0.57386499620653,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0,6.27181028664753,7.93486468908049,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,7.9982275633065,5.96345060569357,0.61245399607477,0.383381884072945,0,8.8092704799511,7.02280359468532,5.9906547969935,6.19865552331911,8.41686321142169,5.2091337055676,5.862842979029,5.6276261003168,5.95913166329559,4.12480019663135,7.68807076315156,4.47358669980721,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,10.0359728401231,3.20250421973039,2.01046963380583,2.25971616249959,2.04572365864264,7.48036960414416,4.86723789203273,0,0,0.758168275301024,0,0.130120442962704,0.229902104433473,0,0.30140963567143,0.476255494059295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,2.26390147234426,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0,0,0,0,0,0,0,0,4.97706828962155,3.7507739709505,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646793418913773,0.214337035031592,0.532020700926821,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0.564751842617067,0.920650473014354,0.572895513439397,0.171853182343688,0.685082519770642,0,0.675022500231806,3.15224842256954,1.35942722695261,4.14208249401456,0.207574695168353,0,0.853668028770671,0.486213434136588,0.628839487883947,0.919217542250071,0.888986911206461,1.03017528619447,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.749132059759059,0.89635213366817,0.516919220600519,0.476293691283074,0.579421629724277,0.38581844092741,0,0.588795680537589,1.37147700954166,1.06485483695602,0.476872379894642,0.581385666529314,1.12931256498397,0.676916863133412,0.182927972872773,0,0.543216455383447,0.561142271657738,0.593175090620871,0.591026894253381,0.818462086339379,0.464810523557898,0.192906610981141,1.49886346762768,0.701794825336225,0.429742108096597,0.57386499620653,0,0
|short_description=p5@Ptpn5
|short_description=p5@Ptpn5
}}
}}

Revision as of 15:20, 14 November 2012

Short description:p5@Ptpn5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Ptpn5_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: -13bp_to_ENSMUST00000102626, NM_013643, uc009hab.2, uc009hac.1_5end
EntrezGene:Ptpn5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Ptpn5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.04
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.98
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.03e-2973
regional part of nervous system1.94e-2954
nervous system9.89e-2975
neural tube1.42e-2552
neural rod1.42e-2552
future spinal cord1.42e-2552
neural keel1.42e-2552
gray matter3.38e-2134
ectoderm-derived structure3.64e-2195
ectoderm3.64e-2195
presumptive ectoderm3.64e-2195
neurectoderm1.26e-1964
neural plate1.26e-1964
presumptive neural plate1.26e-1964
basal ganglion1.06e-188
nuclear complex of neuraxis1.06e-188
aggregate regional part of brain1.06e-188
collection of basal ganglia1.06e-188
cerebral subcortex1.06e-188
brain2.17e-1747
future brain2.17e-1747
ecto-epithelium1.88e-1673
regional part of brain4.50e-1646
posterior neural tube8.20e-1512
chordal neural plate8.20e-1512
spinal cord1.33e-146
dorsal region element1.33e-146
dorsum1.33e-146
anterior neural tube1.84e-1340
brain grey matter7.45e-1329
regional part of telencephalon7.45e-1329
telencephalon7.45e-1329
regional part of spinal cord1.20e-125
gray matter of spinal cord1.20e-125
corpus striatum3.56e-125
striatum3.56e-125
ventral part of telencephalon3.56e-125
future corpus striatum3.56e-125
regional part of forebrain5.61e-1239
forebrain5.61e-1239
future forebrain5.61e-1239
structure with developmental contribution from neural crest8.46e-1292
regional part of midbrain1.34e-104
midbrain1.34e-104
presumptive midbrain1.34e-104
midbrain neural tube1.34e-104
pre-chordal neural plate2.93e-1049
raphe nuclei1.25e-083
reticular formation1.25e-083
tube2.28e-08114
substantia nigra4.03e-083
telencephalic nucleus4.03e-083
midbrain nucleus4.03e-083
neural nucleus4.03e-083
nucleus of brain4.03e-083
ventral horn of spinal cord5.02e-083
anatomical conduit1.96e-07122







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:54389067..54389090,-&oldid=2326896"