FFCP PHASE1:Mm9::chr5:117690482..117690501,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr5:117690482..117690501,+ | |id=chr5:117690482..117690501,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.85e-13!23;CL:0000337!3.85e-13!23;CL:0002319!2.41e-12!43;CL:0000221!2.87e-12!44;CL:0000133!2.87e-12!44;CL:0000540!1.67e-11!33;CL:0000047!1.67e-11!33;CL:0000031!1.67e-11!33;CL:0000404!1.67e-11!33;CL:0000055!1.93e-11!50;CL:0000393!3.50e-11!39;CL:0000211!3.50e-11!39 | |ontology_enrichment_celltype=CL:0000117!3.85e-13!23;CL:0000337!3.85e-13!23;CL:0002319!2.41e-12!43;CL:0000221!2.87e-12!44;CL:0000133!2.87e-12!44;CL:0000540!1.67e-11!33;CL:0000047!1.67e-11!33;CL:0000031!1.67e-11!33;CL:0000404!1.67e-11!33;CL:0000055!1.93e-11!50;CL:0000393!3.50e-11!39;CL:0000211!3.50e-11!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.90e-15,23;CL:0000337,7.90e-15,23;CL:0002319,1.88e-11,43;CL:0000221,2.13e-11,44;CL:0000133,2.13e-11,44;CL:0000540,8.45e-11,33;CL:0000047,8.45e-11,33;CL:0000031,8.45e-11,33;CL:0000404,8.45e-11,33;CL:0000393,1.24e-10,39;CL:0000211,1.24e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.63e-31!73;UBERON:0005743!1.63e-31!73;UBERON:0000073!2.06e-30!75;UBERON:0001016!2.06e-30!75;UBERON:0001049!1.97e-27!52;UBERON:0005068!1.97e-27!52;UBERON:0006241!1.97e-27!52;UBERON:0007135!1.97e-27!52;UBERON:0002346!1.27e-26!71;UBERON:0003075!1.27e-26!71;UBERON:0007284!1.27e-26!71;UBERON:0000955!3.07e-26!50;UBERON:0006238!3.07e-26!50;UBERON:0000033!6.33e-26!63;UBERON:0002616!1.82e-25!49;UBERON:0004121!3.37e-25!102;UBERON:0000924!3.37e-25!102;UBERON:0006601!3.37e-25!102;UBERON:0003056!1.37e-21!49;UBERON:0003080!1.33e-20!40;UBERON:0002020!5.11e-20!34;UBERON:0002780!5.96e-20!39;UBERON:0001890!5.96e-20!39;UBERON:0006240!5.96e-20!39;UBERON:0007811!1.55e-17!86;UBERON:0002791!4.91e-17!29;UBERON:0003528!4.91e-17!29;UBERON:0001893!4.91e-17!29;UBERON:0000153!2.29e-15!94;UBERON:0000956!1.22e-12!21;UBERON:0001869!1.22e-12!21;UBERON:0000203!1.22e-12!21;UBERON:0002619!1.19e-10!17;UBERON:0002021!5.77e-08!10;UBERON:0000411!5.77e-08!10;UBERON:0001950!5.77e-08!10;UBERON:0000025!2.03e-07!114;UBERON:0003076!2.69e-07!12;UBERON:0003057!2.69e-07!12;UBERON:0004111!7.11e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!1.63e-31!73;UBERON:0005743!1.63e-31!73;UBERON:0000073!2.06e-30!75;UBERON:0001016!2.06e-30!75;UBERON:0001049!1.97e-27!52;UBERON:0005068!1.97e-27!52;UBERON:0006241!1.97e-27!52;UBERON:0007135!1.97e-27!52;UBERON:0002346!1.27e-26!71;UBERON:0003075!1.27e-26!71;UBERON:0007284!1.27e-26!71;UBERON:0000955!3.07e-26!50;UBERON:0006238!3.07e-26!50;UBERON:0000033!6.33e-26!63;UBERON:0002616!1.82e-25!49;UBERON:0004121!3.37e-25!102;UBERON:0000924!3.37e-25!102;UBERON:0006601!3.37e-25!102;UBERON:0003056!1.37e-21!49;UBERON:0003080!1.33e-20!40;UBERON:0002020!5.11e-20!34;UBERON:0002780!5.96e-20!39;UBERON:0001890!5.96e-20!39;UBERON:0006240!5.96e-20!39;UBERON:0007811!1.55e-17!86;UBERON:0002791!4.91e-17!29;UBERON:0003528!4.91e-17!29;UBERON:0001893!4.91e-17!29;UBERON:0000153!2.29e-15!94;UBERON:0000956!1.22e-12!21;UBERON:0001869!1.22e-12!21;UBERON:0000203!1.22e-12!21;UBERON:0002619!1.19e-10!17;UBERON:0002021!5.77e-08!10;UBERON:0000411!5.77e-08!10;UBERON:0001950!5.77e-08!10;UBERON:0000025!2.03e-07!114;UBERON:0003076!2.69e-07!12;UBERON:0003057!2.69e-07!12;UBERON:0004111!7.11e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.65e-33,73;UBERON:0000073,1.07e-32,54;UBERON:0002346,6.62e-32,64;UBERON:0003075,6.62e-32,64;UBERON:0007284,6.62e-32,64;UBERON:0001016,2.35e-31,75;UBERON:0001049,3.23e-31,52;UBERON:0005068,3.23e-31,52;UBERON:0006241,3.23e-31,52;UBERON:0007135,3.23e-31,52;UBERON:0000955,9.99e-28,47;UBERON:0006238,9.99e-28,47;UBERON:0002616,7.47e-27,46;UBERON:0004121,6.88e-26,95;UBERON:0000924,6.88e-26,95;UBERON:0006601,6.88e-26,95;UBERON:0010371,8.85e-26,73;UBERON:0003056,1.05e-23,49;UBERON:0003080,2.19e-23,40;UBERON:0002020,1.03e-22,34;UBERON:0002780,1.23e-22,39;UBERON:0001890,1.23e-22,39;UBERON:0006240,1.23e-22,39;UBERON:0010314,1.02e-19,92;UBERON:0003528,2.71e-19,29;UBERON:0002791,2.71e-19,29;UBERON:0001893,2.71e-19,29;UBERON:0000956,2.97e-14,21;UBERON:0001869,2.97e-14,21;UBERON:0000203,2.97e-14,21;UBERON:0002619,5.62e-12,17;UBERON:0002021,6.69e-09,10;UBERON:0000411,6.69e-09,10;UBERON:0001950,6.69e-09,10;UBERON:0003076,3.90e-08,12;UBERON:0003057,3.90e-08,12;UBERON:0000025,7.42e-08,114;UBERON:0004111,3.21e-07,122 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28766635497425,4.66333883609767,3.48738829107195,3.12956537739216,4.36050312760893,4.17403747195497,1.94429899074283,3.3596741190087,4.31257693094915,0,0,0,1.54355661621568,0.573066879877513,0,15.9830004079082,18.5146842745212,16.4796164911607,2.71075625655306,1.77858959222228,0.449949858640699,0,0.7104801149461,1.79760066311043,2.30530983192933,9.85051316930538,12.9605700798423,11.3575479129746,13.7112472513826,13.0312439161452,11.8816075238505,11.2139201091337,7.35375029288017,12.1127469099328,14.8117312178818,19.8152427900554,17.9365351313064,14.4550476891807,20.3156214517136,11.725685958058,11.8180148106653,16.3494125121187,24.4541725943144,18.5083185038834,17.8943467992289,0.302904773332736,0.755715601067855,0.579728977403356,0,0,0,0,0,1.96622188184453,2.72688516124892,1.81850203222008,2.82671659608272,1.26759077799012,3.84979432242953,2.54805239706646,0,0,0,0,0.5709193985953,0.258937883647172,2.52351636410202,1.56136794089522,0.304465478312141,0.230615497256059,0.60289056221049,1.17588707135705,1.25666591329675,0,1.44599356919912,0.884610551949874,2.26473589926373,0.883366073841574,0.969750506270444,0,19.6163133997737,17.1746299587033,0.510914110417183,0,0,0,19.0234112044125,11.8950156732843,23.7486725493314,22.2495129846114,14.3200656104985,16.4152555202052,17.8465389374533,1.2220723662038,1.24406970610093,0,3.36706969418358,0.390361328888111,0.919608417733892,2.16074555766419,2.86339153887859,3.06164246180975,5.76511741281824,5.62210347358373,9.05461797586555,0.215567992932842,0.189106080167819,0.879755620819744,0.657587197282725,0.278047249225598,1.39300866608867,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,1.17263029990548,0.36012412292203,0.946978942340841,0.196764231747404,1.07986979021165,0.232533944750408,1.3413670069981,0.700592054203017,0.16455984991348,0.985004784474571,0.648550476366846,0.730999937126662,0.658650345873152,1.07365135008297,22.5010244963616,25.7261530948211,0,0.264450566663544,1.70630600428187,2.32236671860439,2.19074684247559,1.00841762311671,1.11189021922435,1.14135375667535,0.474529061544512,0.988193728344065,1.50801125280162,1.1937388322469,1.36474860983384,0,0.432276099749388,0.199141273254367,0.948339504765408,0.685491075658373,0,0.203651327845314,0.387904974335251,0.841629838683823,0.948548056863859,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,1.11642284300551,0.312037673114561,0,0.179397413521912,0,0,0.947457058852424,1.30371981153621,0.678980343100753,0.469380496577004,0.670025029767263,0.476087281772027,0,0.788175720530955,1.32878813789265,1.75400245523236,0.81931657357869,1.03610989119537,1.59113964439663,0,0,0,0.551873492609465,16.8578119487182,12.0728037189969,3.11476396215683,0.757412781613119,2.2085575359138,1.95219372148319,2.15423397732799,0.716906393857656,0.891194696329576,0.849229592366497,0.809621403349789,0.876767573733936,3.55759000151871,26.0270266301664,1.56134093729095,0.712262414669021,0.651547837414304,2.63952196756057,0,0.485561272309963,0.906970670894253,0,0.590603785761546,0.614870295887855,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,22.8094535855038,1.44048875225048,1.16422815404479,2.7863814554107,3.72414490648775,4.63758925765383,4.60737257685939,5.17590413494819,0.469343416127421,0.21183207086382,0.882113592219848,0.65954501176592,0.322928853391811,0.603129249281559,0.477489376012546,0.492422699235184,0.291480836629851,14.8340241608408,0,0.619160603889667,0.185194527369712,0,0.27338845544205,0,0,0,0,2.86401185404534,1.26534397432454,1.62655573701479,1.29606408986162,1.25452977608681,0.655087691238533,1.34864346384821,2.56225712748541,1.57053565190418,1.16653475962614,0,0,1.04661582230785,0.66183396182839,1.75006069509643,1.16243841129958,1.520605129417,1.40828686374905,2.0832701575032,1.36317147753424,0,0.576060012515731,0.948033361884535,2.63542779877213,3.49217254360413,2.5984164595559,1.61124026100733,1.98681354781265,0.841368146639782,0.590758108698309,0.605798699688886,0.838274873204998,0.302478555410522,0.194915761479505,0.192423683280659,0.701261413089414,1.13365191807606,0,0,0,2.51146472241848,1.12609485270709,1.46521299413812,0.428736758158132,0,31.0613513439387,30.8417908459809,36.092417346682,22.6846200693668,19.182310553578,19.6402413321322,18.2256075062588,24.7676661773321,18.5788387683524,28.4768171463501,1.3492355185943,4.78829848081237,4.09760653809922,4.61902762429759,2.93458427679175,2.5738091183002,3.11145418922261,3.09052585858341,3.53011130550997,4.54854981174835,6.33698249725599,3.39527414494937,3.183811253976,3.3293079250532,3.61843454420364,1.90517476513229,4.1718357340148,3.27945674788299,1.64834360321323,3.97437084362873,4.11443102862498,1.95223386775271,2.86123427936785,2.76158191601424,3.29382831453657,2.5384382367503,4.93905526756486,4.47218509444333,4.6173398707593,5.61142271657738,2.60997039873183,3.05363895364247,5.72923460437565,2.94379998253335,2.70069255373598,7.74412791607632,2.57324769289949,3.00819475667618,1.53030665655075,0.441182838239031,0.927471342481686 | |phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28766635497425,4.66333883609767,3.48738829107195,3.12956537739216,4.36050312760893,4.17403747195497,1.94429899074283,3.3596741190087,4.31257693094915,0,0,0,1.54355661621568,0.573066879877513,0,15.9830004079082,18.5146842745212,16.4796164911607,2.71075625655306,1.77858959222228,0.449949858640699,0,0.7104801149461,1.79760066311043,2.30530983192933,9.85051316930538,12.9605700798423,11.3575479129746,13.7112472513826,13.0312439161452,11.8816075238505,11.2139201091337,7.35375029288017,12.1127469099328,14.8117312178818,19.8152427900554,17.9365351313064,14.4550476891807,20.3156214517136,11.725685958058,11.8180148106653,16.3494125121187,24.4541725943144,18.5083185038834,17.8943467992289,0.302904773332736,0.755715601067855,0.579728977403356,0,0,0,0,0,1.96622188184453,2.72688516124892,1.81850203222008,2.82671659608272,1.26759077799012,3.84979432242953,2.54805239706646,0,0,0,0,0.5709193985953,0.258937883647172,2.52351636410202,1.56136794089522,0.304465478312141,0.230615497256059,0.60289056221049,1.17588707135705,1.25666591329675,0,1.44599356919912,0.884610551949874,2.26473589926373,0.883366073841574,0.969750506270444,0,19.6163133997737,17.1746299587033,0.510914110417183,0,0,0,19.0234112044125,11.8950156732843,23.7486725493314,22.2495129846114,14.3200656104985,16.4152555202052,17.8465389374533,1.2220723662038,1.24406970610093,0,3.36706969418358,0.390361328888111,0.919608417733892,2.16074555766419,2.86339153887859,3.06164246180975,5.76511741281824,5.62210347358373,9.05461797586555,0.215567992932842,0.189106080167819,0.879755620819744,0.657587197282725,0.278047249225598,1.39300866608867,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,1.17263029990548,0.36012412292203,0.946978942340841,0.196764231747404,1.07986979021165,0.232533944750408,1.3413670069981,0.700592054203017,0.16455984991348,0.985004784474571,0.648550476366846,0.730999937126662,0.658650345873152,1.07365135008297,22.5010244963616,25.7261530948211,0,0.264450566663544,1.70630600428187,2.32236671860439,2.19074684247559,1.00841762311671,1.11189021922435,1.14135375667535,0.474529061544512,0.988193728344065,1.50801125280162,1.1937388322469,1.36474860983384,0,0.432276099749388,0.199141273254367,0.948339504765408,0.685491075658373,0,0.203651327845314,0.387904974335251,0.841629838683823,0.948548056863859,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,1.11642284300551,0.312037673114561,0,0.179397413521912,0,0,0.947457058852424,1.30371981153621,0.678980343100753,0.469380496577004,0.670025029767263,0.476087281772027,0,0.788175720530955,1.32878813789265,1.75400245523236,0.81931657357869,1.03610989119537,1.59113964439663,0,0,0,0.551873492609465,16.8578119487182,12.0728037189969,3.11476396215683,0.757412781613119,2.2085575359138,1.95219372148319,2.15423397732799,0.716906393857656,0.891194696329576,0.849229592366497,0.809621403349789,0.876767573733936,3.55759000151871,26.0270266301664,1.56134093729095,0.712262414669021,0.651547837414304,2.63952196756057,0,0.485561272309963,0.906970670894253,0,0.590603785761546,0.614870295887855,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,22.8094535855038,1.44048875225048,1.16422815404479,2.7863814554107,3.72414490648775,4.63758925765383,4.60737257685939,5.17590413494819,0.469343416127421,0.21183207086382,0.882113592219848,0.65954501176592,0.322928853391811,0.603129249281559,0.477489376012546,0.492422699235184,0.291480836629851,14.8340241608408,0,0.619160603889667,0.185194527369712,0,0.27338845544205,0,0,0,0,2.86401185404534,1.26534397432454,1.62655573701479,1.29606408986162,1.25452977608681,0.655087691238533,1.34864346384821,2.56225712748541,1.57053565190418,1.16653475962614,0,0,1.04661582230785,0.66183396182839,1.75006069509643,1.16243841129958,1.520605129417,1.40828686374905,2.0832701575032,1.36317147753424,0,0.576060012515731,0.948033361884535,2.63542779877213,3.49217254360413,2.5984164595559,1.61124026100733,1.98681354781265,0.841368146639782,0.590758108698309,0.605798699688886,0.838274873204998,0.302478555410522,0.194915761479505,0.192423683280659,0.701261413089414,1.13365191807606,0,0,0,2.51146472241848,1.12609485270709,1.46521299413812,0.428736758158132,0,31.0613513439387,30.8417908459809,36.092417346682,22.6846200693668,19.182310553578,19.6402413321322,18.2256075062588,24.7676661773321,18.5788387683524,28.4768171463501,1.3492355185943,4.78829848081237,4.09760653809922,4.61902762429759,2.93458427679175,2.5738091183002,3.11145418922261,3.09052585858341,3.53011130550997,4.54854981174835,6.33698249725599,3.39527414494937,3.183811253976,3.3293079250532,3.61843454420364,1.90517476513229,4.1718357340148,3.27945674788299,1.64834360321323,3.97437084362873,4.11443102862498,1.95223386775271,2.86123427936785,2.76158191601424,3.29382831453657,2.5384382367503,4.93905526756486,4.47218509444333,4.6173398707593,5.61142271657738,2.60997039873183,3.05363895364247,5.72923460437565,2.94379998253335,2.70069255373598,7.74412791607632,2.57324769289949,3.00819475667618,1.53030665655075,0.441182838239031,0.927471342481686 | ||
|short_description=p3@Taok3 | |short_description=p3@Taok3 | ||
}} | }} |
Revision as of 16:36, 14 November 2012
Short description: | p3@Taok3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Taok3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -174bp_to_ENSMUST00000111975_5end |
EntrezGene: | Taok3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.90e-15 | 23 |
neuroblast (sensu Vertebrata) | 7.90e-15 | 23 |
neural cell | 1.88e-11 | 43 |
ectodermal cell | 2.13e-11 | 44 |
neurectodermal cell | 2.13e-11 | 44 |
neuron | 8.45e-11 | 33 |
neuronal stem cell | 8.45e-11 | 33 |
neuroblast | 8.45e-11 | 33 |
electrically signaling cell | 8.45e-11 | 33 |
electrically responsive cell | 1.24e-10 | 39 |
electrically active cell | 1.24e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.