FFCP PHASE1:Mm9::chr15:83610464..83610516,+: Difference between revisions
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|id=chr15:83610464..83610516,+ | |id=chr15:83610464..83610516,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.20e-13!23;CL:0000337!1.20e-13!23 | |ontology_enrichment_celltype=CL:0000117!1.20e-13!23;CL:0000337!1.20e-13!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.30e-18,23;CL:0000337,7.30e-18,23;CL:0000540,3.78e-10,33;CL:0000047,3.78e-10,33;CL:0000031,3.78e-10,33;CL:0000404,3.78e-10,33;CL:0002609,2.85e-08,6;CL:0000393,1.57e-07,39;CL:0000211,1.57e-07,39;CL:0002319,8.27e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.74e-23!52;UBERON:0005068!5.74e-23!52;UBERON:0006241!5.74e-23!52;UBERON:0007135!5.74e-23!52;UBERON:0002020!5.94e-21!34;UBERON:0000955!1.28e-20!50;UBERON:0006238!1.28e-20!50;UBERON:0002616!4.27e-20!49;UBERON:0003080!1.76e-19!40;UBERON:0002780!4.24e-19!39;UBERON:0001890!4.24e-19!39;UBERON:0006240!4.24e-19!39;UBERON:0003056!3.00e-18!49;UBERON:0001017!4.55e-18!73;UBERON:0005743!4.55e-18!73;UBERON:0000033!7.56e-18!63;UBERON:0000073!1.76e-17!75;UBERON:0001016!1.76e-17!75;UBERON:0002791!1.85e-17!29;UBERON:0003528!1.85e-17!29;UBERON:0001893!1.85e-17!29;UBERON:0002346!4.36e-17!71;UBERON:0003075!4.36e-17!71;UBERON:0007284!4.36e-17!71;UBERON:0000956!7.59e-14!21;UBERON:0001869!7.59e-14!21;UBERON:0000203!7.59e-14!21;UBERON:0004121!7.95e-13!102;UBERON:0000924!7.95e-13!102;UBERON:0006601!7.95e-13!102;UBERON:0000153!1.39e-12!94;UBERON:0007811!6.50e-11!86;UBERON:0002619!1.34e-10!17;UBERON:0002021!4.51e-09!10;UBERON:0000411!4.51e-09!10;UBERON:0001950!4.51e-09!10 | |ontology_enrichment_uberon=UBERON:0001049!5.74e-23!52;UBERON:0005068!5.74e-23!52;UBERON:0006241!5.74e-23!52;UBERON:0007135!5.74e-23!52;UBERON:0002020!5.94e-21!34;UBERON:0000955!1.28e-20!50;UBERON:0006238!1.28e-20!50;UBERON:0002616!4.27e-20!49;UBERON:0003080!1.76e-19!40;UBERON:0002780!4.24e-19!39;UBERON:0001890!4.24e-19!39;UBERON:0006240!4.24e-19!39;UBERON:0003056!3.00e-18!49;UBERON:0001017!4.55e-18!73;UBERON:0005743!4.55e-18!73;UBERON:0000033!7.56e-18!63;UBERON:0000073!1.76e-17!75;UBERON:0001016!1.76e-17!75;UBERON:0002791!1.85e-17!29;UBERON:0003528!1.85e-17!29;UBERON:0001893!1.85e-17!29;UBERON:0002346!4.36e-17!71;UBERON:0003075!4.36e-17!71;UBERON:0007284!4.36e-17!71;UBERON:0000956!7.59e-14!21;UBERON:0001869!7.59e-14!21;UBERON:0000203!7.59e-14!21;UBERON:0004121!7.95e-13!102;UBERON:0000924!7.95e-13!102;UBERON:0006601!7.95e-13!102;UBERON:0000153!1.39e-12!94;UBERON:0007811!6.50e-11!86;UBERON:0002619!1.34e-10!17;UBERON:0002021!4.51e-09!10;UBERON:0000411!4.51e-09!10;UBERON:0001950!4.51e-09!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.29e-28,34;UBERON:0000073,3.74e-27,54;UBERON:0001049,2.96e-26,52;UBERON:0005068,2.96e-26,52;UBERON:0006241,2.96e-26,52;UBERON:0007135,2.96e-26,52;UBERON:0003528,1.26e-23,29;UBERON:0002791,1.26e-23,29;UBERON:0001893,1.26e-23,29;UBERON:0001017,2.61e-22,73;UBERON:0003080,4.60e-22,40;UBERON:0000955,1.18e-21,47;UBERON:0006238,1.18e-21,47;UBERON:0002780,1.50e-21,39;UBERON:0001890,1.50e-21,39;UBERON:0006240,1.50e-21,39;UBERON:0002346,2.32e-21,64;UBERON:0003075,2.32e-21,64;UBERON:0007284,2.32e-21,64;UBERON:0001016,2.89e-21,75;UBERON:0002616,5.55e-21,46;UBERON:0000956,9.23e-19,21;UBERON:0001869,9.23e-19,21;UBERON:0000203,9.23e-19,21;UBERON:0003056,9.73e-19,49;UBERON:0010371,1.12e-17,73;UBERON:0004121,3.89e-16,95;UBERON:0000924,3.89e-16,95;UBERON:0006601,3.89e-16,95;UBERON:0002619,2.39e-14,17;UBERON:0002021,1.08e-11,10;UBERON:0000411,1.08e-11,10;UBERON:0001950,1.08e-11,10;UBERON:0010314,1.96e-10,92 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,6.06949382578793,6.34789175126439,5.70448263155561,0,0,0,0,0,0.299600110518405,1.15265491596466,181.664200764453,197.783699655927,203.594562588138,11.1403883917483,10.1599528837742,108.894320502094,75.3345402203338,119.498442259303,3.30347642998166,5.74593021383345,4.6081959976873,5.27545150920775,3.01909223887952,6.25096044668112,3.35019598801657,6.75315132038016,5.04234217663473,17.9723437138937,12.386336229522,13.7935589910722,0.075726193333184,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0.281686839553361,0,0,0,0,0,0,0.91347103775248,0,0,0.520455980298408,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,4.49371918214468,14.1825186873774,72.251252464897,42.7607827673,46.0287823194595,9.97382613885888,12.3303359931496,0.101839363850316,0,0,0,1.17108398666433,0,1.44049703844279,0.90422890701429,0.408218994907967,0.768682321709099,1.68663104207512,0,1.5089759505299,3.02569728268511,1.75951124163949,2.41115305670332,3.89266148915837,2.089512999133,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0,0.473489471170421,0,0,0,0.268273401399619,0,0,0,0,0,0,0,34.0669716673886,72.2390378902577,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,1.1270773567308,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0.335012514883631,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.21101179975584,3.28192722458169,0.163934945376675,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0,0.534196811001766,0.325773918707152,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,2.16073312837572,2.97524972700335,1.92903331528433,0.354680467284547,0.891844088010353,0.822745103010605,0.913394847343798,0,0,0,0,1.29171541356724,0.361877549568935,0,0,0,8.71498919449395,0.512612642393558,0,0,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0.627264888043406,0,0,0,0,0,0,0,0.149516546043979,0,0.583353565032143,0.516639293910924,0.506868376472335,0.352071715937262,0.13020438484395,0.524296722128554,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0,85.277528235177,70.4297611855981,65.3100885320912,74.4124279548167,61.6574267793578,42.3020582538232,59.4019800203989,57.190792809476,50.2988073972467,51.776031175182,1.14166082342594,2.39414924040619,4.09760653809922,5.59145449257076,6.49800804146745,9.74370594785075,9.77885602327107,7.62329711783909,8.02298023979538,7.32821914115013,10.8996098952803,10.1858224348481,6.9294715527713,9.53974770832552,8.73019128125322,8.57328644309533,8.57544011991931,9.64546102318525,13.5988347265091,8.39033844766065,8.9146005620208,6.74408063405482,8.34526664815623,9.88355633099834,8.56395361779509,10.4922113785679,9.69518256225695,9.47050961176234,7.33342214767654,9.53941861818155,8.54172130494054,9.55493479042966,7.36615877705441,8.6764631064141,6.55882477335881,28.2285953069879,9.35726433781634,9.66919743217342,0.765153328275374,0.882365676478062,0.463735671240843 | ||
|short_description=p1@Mpped1 | |short_description=p1@Mpped1 | ||
}} | }} |
Revision as of 18:41, 14 November 2012
Short description: | p1@Mpped1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mpped1_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 11bp_to_ENSMUST00000046168, NM_172610, uc007xbk.1_5end |
EntrezGene: | Mpped1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.30e-18 | 23 |
neuroblast (sensu Vertebrata) | 7.30e-18 | 23 |
neuron | 3.78e-10 | 33 |
neuronal stem cell | 3.78e-10 | 33 |
neuroblast | 3.78e-10 | 33 |
electrically signaling cell | 3.78e-10 | 33 |
neuron of cerebral cortex | 2.85e-08 | 6 |
electrically responsive cell | 1.57e-07 | 39 |
electrically active cell | 1.57e-07 | 39 |
neural cell | 8.27e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.29e-28 | 34 |
regional part of nervous system | 3.74e-27 | 54 |
neural tube | 2.96e-26 | 52 |
neural rod | 2.96e-26 | 52 |
future spinal cord | 2.96e-26 | 52 |
neural keel | 2.96e-26 | 52 |
brain grey matter | 1.26e-23 | 29 |
regional part of telencephalon | 1.26e-23 | 29 |
telencephalon | 1.26e-23 | 29 |
central nervous system | 2.61e-22 | 73 |
anterior neural tube | 4.60e-22 | 40 |
brain | 1.18e-21 | 47 |
future brain | 1.18e-21 | 47 |
regional part of forebrain | 1.50e-21 | 39 |
forebrain | 1.50e-21 | 39 |
future forebrain | 1.50e-21 | 39 |
neurectoderm | 2.32e-21 | 64 |
neural plate | 2.32e-21 | 64 |
presumptive neural plate | 2.32e-21 | 64 |
nervous system | 2.89e-21 | 75 |
regional part of brain | 5.55e-21 | 46 |
cerebral cortex | 9.23e-19 | 21 |
cerebral hemisphere | 9.23e-19 | 21 |
pallium | 9.23e-19 | 21 |
pre-chordal neural plate | 9.73e-19 | 49 |
ecto-epithelium | 1.12e-17 | 73 |
ectoderm-derived structure | 3.89e-16 | 95 |
ectoderm | 3.89e-16 | 95 |
presumptive ectoderm | 3.89e-16 | 95 |
regional part of cerebral cortex | 2.39e-14 | 17 |
occipital lobe | 1.08e-11 | 10 |
visual cortex | 1.08e-11 | 10 |
neocortex | 1.08e-11 | 10 |
structure with developmental contribution from neural crest | 1.96e-10 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.